RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 CCDC171Q6TFL3 1326 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 COL6A3P12111 3177 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 MOXD2PA6NHM9 499 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 RANBP6O60518 1105 aaKnown RBP15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 DUSP11O75319 330 aaKnown RBP15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 MCCP23508 829 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 NKX3-2P78367 333 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 MDM2Q00987 491 aaPredicted RBP15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 NUCB1Q02818 461 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 CHD1LQ86WJ1 897 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 FAM133AQ8N9E0 248 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 DCAF4Q8WV16 495 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 FGD4Q96M96 766 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 ATP11BQ9Y2G3 1177 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 TACC3Q9Y6A5 838 aa15.01□□□□□ -0.01
HNRNPC-221ENST00000555883 SYNRGQ9UMZ2 1314 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 A0A1W2PQ45 241 aaPredicted RBP15□□□□□ -0.01
HNRNPC-221ENST00000555883 A0A1W2PQY0 241 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 NMT2O60551 498 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 PGK1P00558 417 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 IKQ13123 557 aaPredicted RBP15□□□□□ -0.01
HNRNPC-221ENST00000555883 ACVR2BQ13705 512 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 TRIM60Q495X7 471 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 CCSAPQ6IQ19 270 aaPredicted RBP15□□□□□ -0.01
HNRNPC-221ENST00000555883 BTNL9Q6UXG8 535 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 ZNF589Q86UQ0 364 aaPredicted RBP15□□□□□ -0.01
HNRNPC-221ENST00000555883 KLHDC9Q8NEP7 349 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 NUP133Q8WUM0 1156 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 TTC14Q96N46 770 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 A1CFQ9NQ94 594 aaKnown RBP15□□□□□ -0.01
HNRNPC-221ENST00000555883 PDLIM7Q9NR12 457 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 PNMA2Q9UL42 364 aa15□□□□□ -0.01
HNRNPC-221ENST00000555883 LTBP2Q14767 1821 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 TRIM6-TRIM34B2RNG4 842 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 MYCNP04198 464 aaPredicted RBP14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 TOP1P11387 765 aaKnown RBP14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 NMIQ13287 307 aaPredicted RBP14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 KCTD1Q719H9 257 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 ARMCX2Q7L311 632 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 ANKRD33Q7Z3H0 272 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 PLEKHM2Q8IWE5 1019 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 AGBL1Q96MI9 1066 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 TOX2Q96NM4 488 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 KATNBL1Q9H079 304 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 UPF3AQ9H1J1 476 aaKnown RBP14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 RNF41Q9H4P4 317 aaPredicted RBP14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 INCENPQ9NQS7 918 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 RNF146Q9NTX7 359 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 ZHX1Q9UKY1 873 aaPredicted RBP14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 PRR12Q9ULL5 1215 aa14.99□□□□□ -0.01
HNRNPC-221ENST00000555883 ELP1O95163 1332 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 LOC102724159A0A0B4J2E5 919 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 ASB14A6NK59 587 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 POTEB2H3BUK9 544 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 HIP1O00291 1037 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 ICAM1P05362 532 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 SDSP20132 328 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 SLC4A3P48751 1232 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 ACLYP53396 1101 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 GJA9P57773 515 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 PWP2Q15269 919 aaKnown RBP14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 AKNAD1Q5T1N1 836 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 FAM109BQ6ICB4 259 aaPredicted RBP14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 CCDC144CPQ8IYA2 1237 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 PCSK9Q8NBP7 692 aaKnown RBP14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 RILPL2Q969X0 211 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 FERMT2Q96AC1 680 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 TRERF1Q96PN7 1200 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 RANBP17Q9H2T7 1088 aaKnown RBP14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 SPC25Q9HBM1 224 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 HOMER2Q9NSB8 354 aa14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 ISY1Q9ULR0 285 aaKnown RBP14.98□□□□□ -0.01
HNRNPC-221ENST00000555883 KIAA0355O15063 1070 aa14.97□□□□□ -0.01
HNRNPC-221ENST00000555883 IGHDP01880 384 aa14.97□□□□□ -0.01
HNRNPC-221ENST00000555883 CLTBP09497 229 aa14.97□□□□□ -0.01
HNRNPC-221ENST00000555883 SNHG28P0DPA3 235 aa14.97□□□□□ -0.01
HNRNPC-221ENST00000555883 TLE2Q04725 743 aa14.97□□□□□ -0.01
HNRNPC-221ENST00000555883 CCDC144BQ3MJ40 725 aa14.97□□□□□ -0.01
HNRNPC-221ENST00000555883 MFSD6Q6ZSS7 791 aa14.97□□□□□ -0.01
HNRNPC-221ENST00000555883 DEFB123Q8N688 67 aa14.97□□□□□ -0.01
HNRNPC-221ENST00000555883 LENG1Q96BZ8 264 aaPredicted RBP14.97□□□□□ -0.01
HNRNPC-221ENST00000555883 TMEM47Q9BQJ4 181 aa14.97□□□□□ -0.01
HNRNPC-221ENST00000555883 CYP39A1Q9NYL5 469 aa14.97□□□□□ -0.01
HNRNPC-221ENST00000555883 MROH7Q68CQ1 1323 aa14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 TRIM43BA6NCK2 446 aa14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 ALAS1P13196 640 aa14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 CNTN2Q02246 1040 aa14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 KCNA10Q16322 511 aa14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 MORC4Q8TE76 937 aa14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 ESR2Q92731 530 aa14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 TRIM43Q96BQ3 446 aaPredicted RBP14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 GLT1D1Q96MS3 346 aa14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 PRDM5Q9NQX1 630 aaPredicted RBP14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 STARD7Q9NQZ5 370 aa14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 TOMM22Q9NS69 142 aa14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 CCPG1Q9ULG6 757 aa14.96□□□□□ -0.01
HNRNPC-221ENST00000555883 SOWAHBA6NEL2 793 aa14.95□□□□□ -0.02
HNRNPC-221ENST00000555883 ZNF213O14771 459 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms