RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 ALAS1P13196 640 aa21.65■■□□□ 1.06
NEDD1-208ENST00000555806 SLC16A2P36021 539 aa21.65■■□□□ 1.06
NEDD1-208ENST00000555806 NT5C2P49902 561 aa21.65■■□□□ 1.06
NEDD1-208ENST00000555806 TTBK2Q6IQ55 1244 aa21.65■■□□□ 1.06
NEDD1-208ENST00000555806 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.65■■□□□ 1.06
NEDD1-208ENST00000555806 IQCA1Q86XH1 822 aa21.65■■□□□ 1.06
NEDD1-208ENST00000555806 CNPY2Q9Y2B0 182 aa21.65■■□□□ 1.06
NEDD1-208ENST00000555806 DNAJC25-GNG10A0A024R161 153 aa21.64■■□□□ 1.05
NEDD1-208ENST00000555806 DNM1LO00429 736 aa21.64■■□□□ 1.05
NEDD1-208ENST00000555806 PDHBP11177 359 aa21.64■■□□□ 1.05
NEDD1-208ENST00000555806 CHMLP26374 656 aa21.64■■□□□ 1.05
NEDD1-208ENST00000555806 TKFCQ3LXA3 575 aa21.64■■□□□ 1.05
NEDD1-208ENST00000555806 GJC2Q5T442 439 aaPredicted RBP21.64■■□□□ 1.05
NEDD1-208ENST00000555806 SYDE2Q5VT97 1194 aa21.64■■□□□ 1.05
NEDD1-208ENST00000555806 MSL3Q8N5Y2 521 aaKnown RBP21.64■■□□□ 1.05
NEDD1-208ENST00000555806 ARRDC4Q8NCT1 418 aa21.64■■□□□ 1.05
NEDD1-208ENST00000555806 TRERF1Q96PN7 1200 aa21.64■■□□□ 1.05
NEDD1-208ENST00000555806 SENP6Q9GZR1 1112 aaPredicted RBP21.64■■□□□ 1.05
NEDD1-208ENST00000555806 KBTBD13C9JR72 458 aa21.63■■□□□ 1.05
NEDD1-208ENST00000555806 TAL1P17542 331 aaPredicted RBP21.63■■□□□ 1.05
NEDD1-208ENST00000555806 CCDC178Q5BJE1 867 aa21.63■■□□□ 1.05
NEDD1-208ENST00000555806 KRT23Q9C075 422 aa21.63■■□□□ 1.05
NEDD1-208ENST00000555806 CCPG1Q9ULG6 757 aa21.63■■□□□ 1.05
NEDD1-208ENST00000555806 ZMYND8Q9ULU4 1186 aaPredicted RBP21.63■■□□□ 1.05
NEDD1-208ENST00000555806 SYNGAP1Q96PV0 1343 aa21.62■■□□□ 1.05
NEDD1-208ENST00000555806 RARBP10826 455 aa21.62■■□□□ 1.05
NEDD1-208ENST00000555806 BTNL9Q6UXG8 535 aa21.62■■□□□ 1.05
NEDD1-208ENST00000555806 ZNF467Q7Z7K2 595 aaPredicted RBP21.62■■□□□ 1.05
NEDD1-208ENST00000555806 DGKHQ86XP1 1220 aa21.62■■□□□ 1.05
NEDD1-208ENST00000555806 RANBP17Q9H2T7 1088 aaKnown RBP21.62■■□□□ 1.05
NEDD1-208ENST00000555806 CNNM2Q9H8M5 875 aa21.62■■□□□ 1.05
NEDD1-208ENST00000555806 ZHX1Q9UKY1 873 aaPredicted RBP21.62■■□□□ 1.05
NEDD1-208ENST00000555806 POTEB2H3BUK9 544 aa21.61■■□□□ 1.05
NEDD1-208ENST00000555806 SLC34A2O95436 690 aa21.61■■□□□ 1.05
NEDD1-208ENST00000555806 ICAM1P05362 532 aa21.61■■□□□ 1.05
NEDD1-208ENST00000555806 ZNF865P0CJ78 1059 aaPredicted RBP21.61■■□□□ 1.05
NEDD1-208ENST00000555806 AKR1A1P14550 325 aa21.61■■□□□ 1.05
NEDD1-208ENST00000555806 ZNF543Q08ER8 600 aa21.61■■□□□ 1.05
NEDD1-208ENST00000555806 LRRC26Q2I0M4 334 aa21.61■■□□□ 1.05
NEDD1-208ENST00000555806 MAMDC4Q6UXC1 1216 aa21.61■■□□□ 1.05
NEDD1-208ENST00000555806 ZSCAN10Q96SZ4 725 aaPredicted RBP21.61■■□□□ 1.05
NEDD1-208ENST00000555806 KAT14Q9H8E8 782 aa21.61■■□□□ 1.05
NEDD1-208ENST00000555806 A1CFQ9NQ94 594 aaKnown RBP21.61■■□□□ 1.05
NEDD1-208ENST00000555806 XPNPEP3Q9NQH7 507 aa21.61■■□□□ 1.05
NEDD1-208ENST00000555806 SNAI1O95863 264 aaPredicted RBP21.6■■□□□ 1.05
NEDD1-208ENST00000555806 ATN1P54259 1190 aaPredicted RBP21.6■■□□□ 1.05
NEDD1-208ENST00000555806 UBAC1Q9BSL1 405 aa21.6■■□□□ 1.05
NEDD1-208ENST00000555806 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.6■■□□□ 1.05
NEDD1-208ENST00000555806 ZSWIM5Q9P217 1185 aa21.6■■□□□ 1.05
NEDD1-208ENST00000555806 TNKSO95271 1327 aa21.59■■□□□ 1.05
NEDD1-208ENST00000555806 SNHG28P0DPA3 235 aa21.59■■□□□ 1.05
NEDD1-208ENST00000555806 SYN1P17600 705 aa21.59■■□□□ 1.05
NEDD1-208ENST00000555806 CNTN2Q02246 1040 aa21.59■■□□□ 1.05
NEDD1-208ENST00000555806 PTH1RQ03431 593 aa21.59■■□□□ 1.05
NEDD1-208ENST00000555806 LRRC41Q15345 812 aa21.59■■□□□ 1.05
NEDD1-208ENST00000555806 MUM1L1Q5H9M0 696 aa21.59■■□□□ 1.05
NEDD1-208ENST00000555806 NSMFQ6X4W1 530 aa21.59■■□□□ 1.05
NEDD1-208ENST00000555806 ARMCX2Q7L311 632 aa21.59■■□□□ 1.05
NEDD1-208ENST00000555806 PNMA1Q8ND90 353 aa21.59■■□□□ 1.05
NEDD1-208ENST00000555806 LENG1Q96BZ8 264 aaPredicted RBP21.59■■□□□ 1.05
NEDD1-208ENST00000555806 FGD4Q96M96 766 aa21.59■■□□□ 1.05
NEDD1-208ENST00000555806 RBM27Q9P2N5 1060 aaKnown RBP21.59■■□□□ 1.05
NEDD1-208ENST00000555806 SGSM2O43147 1006 aa21.58■■□□□ 1.05
NEDD1-208ENST00000555806 GOLGA8HP0CJ92 632 aa21.58■■□□□ 1.05
NEDD1-208ENST00000555806 TRDNQ13061 729 aa21.58■■□□□ 1.05
NEDD1-208ENST00000555806 GPATCH4Q5T3I0 446 aaKnown RBP21.58■■□□□ 1.05
NEDD1-208ENST00000555806 ENAHQ8N8S7 591 aaPredicted RBP21.58■■□□□ 1.05
NEDD1-208ENST00000555806 FAM133AQ8N9E0 248 aa21.58■■□□□ 1.05
NEDD1-208ENST00000555806 FAM184BQ9ULE4 1060 aa21.58■■□□□ 1.05
NEDD1-208ENST00000555806 U3KPZ7 1027 aaPredicted RBP21.58■■□□□ 1.05
NEDD1-208ENST00000555806 SMCHD1A6NHR9 2005 aa21.57■■□□□ 1.04
NEDD1-208ENST00000555806 PGK1P00558 417 aa21.57■■□□□ 1.04
NEDD1-208ENST00000555806 ACVR2BQ13705 512 aa21.57■■□□□ 1.04
NEDD1-208ENST00000555806 CENPQQ7L2Z9 268 aaPredicted RBP21.57■■□□□ 1.04
NEDD1-208ENST00000555806 RNF180Q86T96 592 aa21.57■■□□□ 1.04
NEDD1-208ENST00000555806 CCDC144CPQ8IYA2 1237 aa21.57■■□□□ 1.04
NEDD1-208ENST00000555806 ANKS1AQ92625 1134 aa21.57■■□□□ 1.04
NEDD1-208ENST00000555806 ABHD16BQ9H3Z7 469 aa21.57■■□□□ 1.04
NEDD1-208ENST00000555806 MCM3APO60318 1980 aa21.56■■□□□ 1.04
NEDD1-208ENST00000555806 ADCYAP1R1P41586 468 aa21.56■■□□□ 1.04
NEDD1-208ENST00000555806 FERMT2Q96AC1 680 aa21.56■■□□□ 1.04
NEDD1-208ENST00000555806 CYP39A1Q9NYL5 469 aa21.56■■□□□ 1.04
NEDD1-208ENST00000555806 PNMA2Q9UL42 364 aa21.56■■□□□ 1.04
NEDD1-208ENST00000555806 SOWAHBA6NEL2 793 aa21.55■■□□□ 1.04
NEDD1-208ENST00000555806 ASB14A6NK59 587 aa21.55■■□□□ 1.04
NEDD1-208ENST00000555806 CYP21A2P08686 494 aa21.55■■□□□ 1.04
NEDD1-208ENST00000555806 RTP1P59025 263 aa21.55■■□□□ 1.04
NEDD1-208ENST00000555806 IFIT1BQ5T764 474 aaKnown RBP21.55■■□□□ 1.04
NEDD1-208ENST00000555806 UBA5Q9GZZ9 404 aa21.55■■□□□ 1.04
NEDD1-208ENST00000555806 CPVLQ9H3G5 476 aa21.55■■□□□ 1.04
NEDD1-208ENST00000555806 NFIBO00712 420 aa21.54■■□□□ 1.04
NEDD1-208ENST00000555806 ASPRV1Q53RT3 343 aa21.54■■□□□ 1.04
NEDD1-208ENST00000555806 CYB5R4Q7L1T6 521 aa21.54■■□□□ 1.04
NEDD1-208ENST00000555806 RALYLQ86SE5 291 aaKnown RBP21.54■■□□□ 1.04
NEDD1-208ENST00000555806 PRO3102Q9H379 93 aa21.54■■□□□ 1.04
NEDD1-208ENST00000555806 ATP11BQ9Y2G3 1177 aa21.54■■□□□ 1.04
NEDD1-208ENST00000555806 WDR19Q8NEZ3 1342 aa21.54■■□□□ 1.04
NEDD1-208ENST00000555806 SYNRGQ9UMZ2 1314 aa21.54■■□□□ 1.04
NEDD1-208ENST00000555806 PTPDC1A2A3K4 754 aa21.53■■□□□ 1.04
NEDD1-208ENST00000555806 PARP1P09874 1014 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms