RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 BRF1Q92994 677 aa11.45□□□□□ -0.58
PSEN1-213ENST00000555386 ERO1AQ96HE7 468 aa11.45□□□□□ -0.58
PSEN1-213ENST00000555386 TMX3Q96JJ7 454 aa11.45□□□□□ -0.58
PSEN1-213ENST00000555386 PORCNQ9H237 461 aa11.45□□□□□ -0.58
PSEN1-213ENST00000555386 EFCC1Q9HA90 598 aa11.45□□□□□ -0.58
PSEN1-213ENST00000555386 RAVER2Q9HCJ3 691 aaKnown RBP11.45□□□□□ -0.58
PSEN1-213ENST00000555386 HOMER2Q9NSB8 354 aa11.45□□□□□ -0.58
PSEN1-213ENST00000555386 PDRG1Q9NUG6 133 aa11.45□□□□□ -0.58
PSEN1-213ENST00000555386 BRPF3Q9ULD4 1205 aa11.45□□□□□ -0.58
PSEN1-213ENST00000555386 PRR12Q9ULL5 1215 aa11.45□□□□□ -0.58
PSEN1-213ENST00000555386 TRIM17Q9Y577 477 aa11.45□□□□□ -0.58
PSEN1-213ENST00000555386 SLC12A7Q9Y666 1083 aa11.45□□□□□ -0.58
PSEN1-213ENST00000555386 KLRF2D3W0D1 207 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 CTGFP29279 349 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 FAM110CQ1W6H9 321 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 FAM160B2Q86V87 743 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 NCAPG2Q86XI2 1143 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 CMTR1Q8N1G2 835 aaKnown RBP11.44□□□□□ -0.58
PSEN1-213ENST00000555386 TMTC2Q8N394 836 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 CCDC82Q8N4S0 544 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 GTF3C2Q8WUA4 911 aaPredicted RBP11.44□□□□□ -0.58
PSEN1-213ENST00000555386 TRIM47Q96LD4 638 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 RABGAP1Q9Y3P9 1069 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 HTTP42858 3142 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 TNPO2O14787 897 aaKnown RBP11.44□□□□□ -0.58
PSEN1-213ENST00000555386 LIFRP42702 1097 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 FCGRTP55899 365 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 ASPRV1Q53RT3 343 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 GPATCH4Q5T3I0 446 aaKnown RBP11.44□□□□□ -0.58
PSEN1-213ENST00000555386 LBX2Q6XYB7 198 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 CTCFLQ8NI51 663 aaPredicted RBP11.44□□□□□ -0.58
PSEN1-213ENST00000555386 MOV10L1Q9BXT6 1211 aaKnown RBP11.44□□□□□ -0.58
PSEN1-213ENST00000555386 SPATC1LQ9H0A9 340 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 MORF4L1Q9UBU8 362 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 MAD2L2Q9UI95 211 aa11.44□□□□□ -0.58
PSEN1-213ENST00000555386 PLXNB2O15031 1838 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 A0A0G2JMZ2 1700 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 GOLGA8BA8MQT2 603 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 ZBTB43O43298 467 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 DDAH1O94760 285 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 SNHG28P0DPA3 235 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 STAT3P40763 770 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 CCNA1P78396 465 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 TROAPQ12815 778 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 STK3Q13188 491 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 GRM4Q14833 912 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 SNRNP48Q6IEG0 339 aaKnown RBP11.43□□□□□ -0.58
PSEN1-213ENST00000555386 HOMER1Q86YM7 354 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 ADGRF4Q8IZF3 695 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 MB21D1Q8N884 522 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 AGBL1Q96MI9 1066 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 TM6SF1Q9BZW5 370 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 GZF1Q9H116 711 aaPredicted RBP11.43□□□□□ -0.58
PSEN1-213ENST00000555386 SLC38A10Q9HBR0 1119 aa11.43□□□□□ -0.58
PSEN1-213ENST00000555386 MYPNQ86TC9 1320 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 hCG_1642624A0A1W2PR95 340 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 GOLGA8AA7E2F4 631 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 PLEKHA8P1O95397 391 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 XRCC6P12956 609 aaKnown RBP eCLIP11.42□□□□□ -0.58
PSEN1-213ENST00000555386 ALAS1P13196 640 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 ERCC3P19447 782 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 CCT2P78371 535 aaKnown RBP11.42□□□□□ -0.58
PSEN1-213ENST00000555386 TOB2Q14106 344 aaPredicted RBP11.42□□□□□ -0.58
PSEN1-213ENST00000555386 USH1GQ495M9 461 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 COL13A1Q5TAT6 717 aaPredicted RBP11.42□□□□□ -0.58
PSEN1-213ENST00000555386 APOA5Q6Q788 366 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 OTOP1Q7RTM1 612 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 COA7Q96BR5 231 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 MTA3Q9BTC8 594 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 PRDM10Q9NQV6 1147 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 ZNF214Q9UL59 606 aaPredicted RBP11.42□□□□□ -0.58
PSEN1-213ENST00000555386 CCPG1Q9ULG6 757 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 GABRQQ9UN88 632 aa11.42□□□□□ -0.58
PSEN1-213ENST00000555386 PALM3A6NDB9 673 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-213ENST00000555386 PPFIA3O75145 1194 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 BRD1O95696 1058 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 CALM1P0DP23 149 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 CALM2P0DP24 149 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 CALM3P0DP25 149 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 KIF5BP33176 963 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 CDC37Q16543 378 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-213ENST00000555386 RTN1Q16799 776 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 NOM1Q5C9Z4 860 aaKnown RBP11.41□□□□□ -0.58
PSEN1-213ENST00000555386 BTNL9Q6UXG8 535 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 GPR142Q7Z601 462 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 PLEKHH3Q7Z736 793 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 CTU1Q7Z7A3 348 aaKnown RBP11.41□□□□□ -0.58
PSEN1-213ENST00000555386 NBPF11Q86T75 865 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 SGMS1Q86VZ5 419 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 FANCBQ8NB91 859 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 REPS2Q8NFH8 660 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 TEX13BQ9BXU2 312 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 JMJD4Q9H9V9 463 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 GRPEL1Q9HAV7 217 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 ADAMTS5Q9UNA0 930 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 RIPK3Q9Y572 518 aa11.41□□□□□ -0.58
PSEN1-213ENST00000555386 DDX49Q9Y6V7 483 aaKnown RBP11.41□□□□□ -0.58
PSEN1-213ENST00000555386 IVNS1ABPQ9Y6Y0 642 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms