RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 PHKBQ93100 1093 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 CSRNP1Q96S65 589 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 RAB17Q9H0T7 212 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 TMEM191BP0C7N4 346 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 PDE1BQ01064 536 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 BFSP1Q12934 665 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 COG4Q9H9E3 785 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 NCAPD3P42695 1498 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 SCNN1DP51172 638 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 PDE1AP54750 535 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 ARHGEF1Q92888 912 aaKnown RBP7.52□□□□□ -1.21
SYNE2-216ENST00000555002 NLRC4Q9NPP4 1024 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 EPS15L1Q9UBC2 864 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 LRWD1Q9UFC0 647 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 ATP1A2P50993 1020 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 RNF219Q5W0B1 726 aaPredicted RBP7.52□□□□□ -1.21
SYNE2-216ENST00000555002 ABHD8Q96I13 439 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 DRC3Q9H069 523 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 CPP00450 1065 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 TMOD1P28289 359 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 PRIM1P49642 420 aaKnown RBP7.52□□□□□ -1.21
SYNE2-216ENST00000555002 NONOQ15233 471 aaKnown RBP eCLIP7.52□□□□□ -1.21
SYNE2-216ENST00000555002 KRT25Q7Z3Z0 450 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 NUDCD3Q8IVD9 361 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 FBXL13Q8NEE6 735 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 SGK1O00141 431 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 KCNK3O14649 394 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 AK2P54819 239 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ANKRD20A4Q4UJ75 823 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ANKRD20A8PQ5CZ79 823 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ANKRD20A2Q5SQ80 823 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ANKRD20A1Q5TYW2 823 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 KLHL14Q9P2G3 628 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 CDV3Q9UKY7 258 aaKnown RBP7.51□□□□□ -1.21
SYNE2-216ENST00000555002 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.51□□□□□ -1.21
SYNE2-216ENST00000555002 TAF5LO75529 589 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ALDH1L1O75891 902 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ASPHQ12797 758 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 MTX1Q13505 466 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 FAM160B1Q5W0V3 765 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 RASEFQ8IZ41 740 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 TMEM247A6NEH6 219 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 TOM1L1O75674 476 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 DAB2P98082 770 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 SNX1Q13596 522 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 FAN1Q9Y2M0 1017 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 PTPN22Q9Y2R2 807 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 PFDN1O60925 122 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 POLR2BP30876 1174 aaKnown RBP7.51□□□□□ -1.21
SYNE2-216ENST00000555002 GCKP35557 465 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 MAGEA1P43355 309 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 FANCCQ00597 558 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 BBS5Q8N3I7 341 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 C17orf53Q8N3J3 647 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-216ENST00000555002 TTF2Q9UNY4 1162 aaKnown RBP7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ABCC5O15440 1437 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 KLHL40Q2TBA0 621 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ARHGEF18Q6ZSZ5 1173 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 CABP7Q86V35 215 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 PI4K2BQ8TCG2 481 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 SLC12A6Q9UHW9 1150 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 DYNLT1P63172 113 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 TRMT44Q8IYL2 757 aaKnown RBP7.51□□□□□ -1.21
SYNE2-216ENST00000555002 CCDC127Q96BQ5 260 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ZNF594Q96JF6 807 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-216ENST00000555002 DPH5Q9H2P9 285 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 DDX41Q9UJV9 622 aaKnown RBP7.51□□□□□ -1.21
SYNE2-216ENST00000555002 THRAP3Q9Y2W1 955 aaKnown RBP7.51□□□□□ -1.21
SYNE2-216ENST00000555002 FAM47AQ5JRC9 791 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ITGA6P23229 1130 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 KIF17Q9P2E2 1029 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 SEPT9Q9UHD8 586 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-216ENST00000555002 KCNJ14Q9UNX9 436 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 EPHB1P54762 984 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 TMED1Q13445 227 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ART3Q13508 389 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 POLA2Q14181 598 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 PTK2BQ14289 1009 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 OTUD7BQ6GQQ9 843 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 TEKT4Q8WW24 435 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 STAMQ92783 540 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 SLC8A2Q9UPR5 921 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 ACEP12821 1306 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 RAD50Q92878 1312 aa7.51□□□□□ -1.21
SYNE2-216ENST00000555002 GRIN2BQ13224 1484 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 CTNNA1P35221 906 aaKnown RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 ARHGAP25P42331 645 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 SUPT20HQ8NEM7 779 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 DEXIO95424 95 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 FAM149B1Q96BN6 582 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 YIPF2Q9BWQ6 316 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 PPIP5K1Q6PFW1 1433 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 PDE6BP35913 854 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 TEKT1Q969V4 418 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 LZTS2Q9BRK4 669 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 PTPN23Q9H3S7 1636 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 CDK13Q14004 1512 aaKnown RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 TUBB4AP04350 444 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 CLTAP09496 248 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 ELF1P32519 619 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms