RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 ZNF654Q8IZM8 581 aa28.26■■■□□ 2.11
SDR39U1-209ENST00000554947 FBXL16Q8N461 479 aa28.26■■■□□ 2.11
SDR39U1-209ENST00000554947 TM6SF1Q9BZW5 370 aa28.26■■■□□ 2.11
SDR39U1-209ENST00000554947 PLXNA1Q9UIW2 1896 aa28.25■■■□□ 2.11
SDR39U1-209ENST00000554947 ICAM1P05362 532 aa28.25■■■□□ 2.11
SDR39U1-209ENST00000554947 CALM1P0DP23 149 aa28.25■■■□□ 2.11
SDR39U1-209ENST00000554947 CALM2P0DP24 149 aa28.25■■■□□ 2.11
SDR39U1-209ENST00000554947 CALM3P0DP25 149 aa28.25■■■□□ 2.11
SDR39U1-209ENST00000554947 NFXL1Q6ZNB6 911 aa28.25■■■□□ 2.11
SDR39U1-209ENST00000554947 APBA2Q99767 749 aa28.25■■■□□ 2.11
SDR39U1-209ENST00000554947 GPHNQ9NQX3 736 aaPredicted RBP28.25■■■□□ 2.11
SDR39U1-209ENST00000554947 RIPK3Q9Y572 518 aa28.25■■■□□ 2.11
SDR39U1-209ENST00000554947 ANAPC15P60006 121 aa28.24■■■□□ 2.11
SDR39U1-209ENST00000554947 LRRC2Q9BYS8 371 aa28.24■■■□□ 2.11
SDR39U1-209ENST00000554947 SLC5A4Q9NY91 659 aa28.24■■■□□ 2.11
SDR39U1-209ENST00000554947 KLRF2D3W0D1 207 aa28.23■■■□□ 2.11
SDR39U1-209ENST00000554947 ADORA2AP29274 412 aa28.23■■■□□ 2.11
SDR39U1-209ENST00000554947 KIF5BP33176 963 aa28.23■■■□□ 2.11
SDR39U1-209ENST00000554947 C8orf34Q49A92 452 aa28.23■■■□□ 2.11
SDR39U1-209ENST00000554947 ADGRF4Q8IZF3 695 aa28.23■■■□□ 2.11
SDR39U1-209ENST00000554947 STAG2Q8N3U4 1231 aa28.23■■■□□ 2.11
SDR39U1-209ENST00000554947 ZNF333Q96JL9 665 aa28.23■■■□□ 2.11
SDR39U1-209ENST00000554947 MMP19Q99542 508 aa28.23■■■□□ 2.11
SDR39U1-209ENST00000554947 UBA5Q9GZZ9 404 aa28.23■■■□□ 2.11
SDR39U1-209ENST00000554947 SLC12A7Q9Y666 1083 aa28.23■■■□□ 2.11
SDR39U1-209ENST00000554947 BAZ2BQ9UIF8 2168 aaKnown RBP28.23■■■□□ 2.11
SDR39U1-209ENST00000554947 CASTP20810 708 aaKnown RBP28.22■■■□□ 2.11
SDR39U1-209ENST00000554947 CYP2B6P20813 491 aa28.22■■■□□ 2.11
SDR39U1-209ENST00000554947 RPS6KB1P23443 525 aa28.22■■■□□ 2.11
SDR39U1-209ENST00000554947 KCTD2Q14681 263 aa28.22■■■□□ 2.11
SDR39U1-209ENST00000554947 CCDC174Q6PII3 467 aa28.22■■■□□ 2.11
SDR39U1-209ENST00000554947 CTCFLQ8NI51 663 aaPredicted RBP28.22■■■□□ 2.11
SDR39U1-209ENST00000554947 AGBL1Q96MI9 1066 aa28.22■■■□□ 2.11
SDR39U1-209ENST00000554947 ZSWIM6Q9HCJ5 1215 aa28.22■■■□□ 2.11
SDR39U1-209ENST00000554947 CCPG1Q9ULG6 757 aa28.22■■■□□ 2.11
SDR39U1-209ENST00000554947 SYNE3Q6ZMZ3 975 aa28.21■■■□□ 2.11
SDR39U1-209ENST00000554947 DPP9Q86TI2 863 aa28.21■■■□□ 2.11
SDR39U1-209ENST00000554947 NUP133Q8WUM0 1156 aa28.21■■■□□ 2.11
SDR39U1-209ENST00000554947 IL17RAQ96F46 866 aa28.21■■■□□ 2.11
SDR39U1-209ENST00000554947 AGXT2Q9BYV1 514 aa28.21■■■□□ 2.11
SDR39U1-209ENST00000554947 ACAD9Q9H845 621 aa28.21■■■□□ 2.11
SDR39U1-209ENST00000554947 HMGCRP04035 888 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 SMARCA1P28370 1054 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 GNAQP50148 359 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 RCAN1P53805 252 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 SNAP25P60880 206 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 UBXN2AP68543 259 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 RUFY3Q7L099 469 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 SH3TC2Q8TF17 1288 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 MTMR8Q96EF0 704 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 TCEANC2Q96MN5 208 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 LZTS2Q9BRK4 669 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 RIOX1Q9H6W3 641 aa28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 DIS3Q9Y2L1 958 aaKnown RBP28.2■■■□□ 2.1
SDR39U1-209ENST00000554947 RBBP6Q7Z6E9 1792 aaKnown RBP28.19■■■□□ 2.1
SDR39U1-209ENST00000554947 CDC37Q16543 378 aaPredicted RBP28.19■■■□□ 2.1
SDR39U1-209ENST00000554947 APOA5Q6Q788 366 aa28.19■■■□□ 2.1
SDR39U1-209ENST00000554947 TRERF1Q96PN7 1200 aa28.19■■■□□ 2.1
SDR39U1-209ENST00000554947 CPVLQ9H3G5 476 aa28.19■■■□□ 2.1
SDR39U1-209ENST00000554947 JMJD4Q9H9V9 463 aa28.19■■■□□ 2.1
SDR39U1-209ENST00000554947 RNF146Q9NTX7 359 aa28.19■■■□□ 2.1
SDR39U1-209ENST00000554947 CENPFP49454 3210 aa28.19■■■□□ 2.1
SDR39U1-209ENST00000554947 SEC24BO95487 1268 aa28.18■■■□□ 2.1
SDR39U1-209ENST00000554947 ALAS1P13196 640 aa28.18■■■□□ 2.1
SDR39U1-209ENST00000554947 ELNP15502 786 aa28.18■■■□□ 2.1
SDR39U1-209ENST00000554947 FGD1P98174 961 aa28.18■■■□□ 2.1
SDR39U1-209ENST00000554947 MAF1Q9H063 256 aa28.18■■■□□ 2.1
SDR39U1-209ENST00000554947 CYP46A1Q9Y6A2 500 aa28.18■■■□□ 2.1
SDR39U1-209ENST00000554947 KIAA0100Q14667 2235 aaKnown RBP28.18■■■□□ 2.1
SDR39U1-209ENST00000554947 COBLO75128 1261 aa28.17■■■□□ 2.1
SDR39U1-209ENST00000554947 CPA1P15085 419 aa28.17■■■□□ 2.1
SDR39U1-209ENST00000554947 SLC4A3P48751 1232 aa28.17■■■□□ 2.1
SDR39U1-209ENST00000554947 OLFML2BQ68BL8 750 aa28.17■■■□□ 2.1
SDR39U1-209ENST00000554947 Q6ZUG5 572 aa28.17■■■□□ 2.1
SDR39U1-209ENST00000554947 NPLOC4Q8TAT6 608 aa28.17■■■□□ 2.1
SDR39U1-209ENST00000554947 TRIB2Q92519 343 aa28.17■■■□□ 2.1
SDR39U1-209ENST00000554947 MYL10Q9BUA6 226 aa28.17■■■□□ 2.1
SDR39U1-209ENST00000554947 SPZ1Q9BXG8 430 aa28.17■■■□□ 2.1
SDR39U1-209ENST00000554947 BIN2Q9UBW5 565 aaPredicted RBP28.17■■■□□ 2.1
SDR39U1-209ENST00000554947 DNAJC25-GNG10A0A024R161 153 aa28.16■■■□□ 2.1
SDR39U1-209ENST00000554947 DHX16O60231 1041 aaKnown RBP28.16■■■□□ 2.1
SDR39U1-209ENST00000554947 IGHA2P01877 340 aa28.16■■■□□ 2.1
SDR39U1-209ENST00000554947 INHAP05111 366 aa28.16■■■□□ 2.1
SDR39U1-209ENST00000554947 ANKRD35Q8N283 1001 aa28.16■■■□□ 2.1
SDR39U1-209ENST00000554947 FANCBQ8NB91 859 aa28.16■■■□□ 2.1
SDR39U1-209ENST00000554947 DDX11Q96FC9 970 aa28.16■■■□□ 2.1
SDR39U1-209ENST00000554947 HOMER2Q9NSB8 354 aa28.16■■■□□ 2.1
SDR39U1-209ENST00000554947 PFASO15067 1338 aa28.16■■■□□ 2.1
SDR39U1-209ENST00000554947 CCDC85CA6NKD9 419 aa28.15■■■□□ 2.1
SDR39U1-209ENST00000554947 TRAF1Q13077 416 aa28.15■■■□□ 2.1
SDR39U1-209ENST00000554947 PPP2R5BQ15173 497 aa28.15■■■□□ 2.1
SDR39U1-209ENST00000554947 QRICH1Q2TAL8 776 aa28.15■■■□□ 2.1
SDR39U1-209ENST00000554947 ZNF792Q3KQV3 632 aa28.15■■■□□ 2.1
SDR39U1-209ENST00000554947 VAT1LQ9HCJ6 419 aa28.15■■■□□ 2.1
SDR39U1-209ENST00000554947 RBM28Q9NW13 759 aaKnown RBP28.15■■■□□ 2.1
SDR39U1-209ENST00000554947 BRPF3Q9ULD4 1205 aa28.15■■■□□ 2.1
SDR39U1-209ENST00000554947 ZBTB5O15062 677 aa28.14■■■□□ 2.1
SDR39U1-209ENST00000554947 ZBTB43O43298 467 aa28.14■■■□□ 2.1
SDR39U1-209ENST00000554947 CCL14Q16627 93 aa28.14■■■□□ 2.1
SDR39U1-209ENST00000554947 MICU3Q86XE3 530 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms