RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 TSPY3P0CV98 308 aa14.85□□□□□ -0.03
RDH11-207ENST00000554731 TSPY8P0CW00 308 aa14.85□□□□□ -0.03
RDH11-207ENST00000554731 FDX1P10109 184 aa14.85□□□□□ -0.03
RDH11-207ENST00000554731 BMP3P12645 472 aa14.85□□□□□ -0.03
RDH11-207ENST00000554731 CCDC144BQ3MJ40 725 aa14.85□□□□□ -0.03
RDH11-207ENST00000554731 SLFN13Q68D06 897 aa14.85□□□□□ -0.03
RDH11-207ENST00000554731 ARMCX2Q7L311 632 aa14.85□□□□□ -0.03
RDH11-207ENST00000554731 NEDD1Q8NHV4 660 aa14.85□□□□□ -0.03
RDH11-207ENST00000554731 MYLIPQ8WY64 445 aa14.85□□□□□ -0.03
RDH11-207ENST00000554731 VTI1AQ96AJ9 217 aa14.85□□□□□ -0.03
RDH11-207ENST00000554731 ISY1Q9ULR0 285 aaKnown RBP14.85□□□□□ -0.03
RDH11-207ENST00000554731 PLIN4Q96Q06 1357 aa14.85□□□□□ -0.03
RDH11-207ENST00000554731 MYH4Q9Y623 1939 aa14.84□□□□□ -0.03
RDH11-207ENST00000554731 TMEM232C9JQI7 657 aa14.84□□□□□ -0.03
RDH11-207ENST00000554731 ERC2O15083 957 aa14.84□□□□□ -0.03
RDH11-207ENST00000554731 TIMP1P01033 207 aa14.84□□□□□ -0.03
RDH11-207ENST00000554731 FOSL2P15408 326 aa14.84□□□□□ -0.03
RDH11-207ENST00000554731 FGD4Q96M96 766 aa14.84□□□□□ -0.03
RDH11-207ENST00000554731 NAPBQ9H115 298 aa14.84□□□□□ -0.03
RDH11-207ENST00000554731 UPF3AQ9H1J1 476 aaKnown RBP14.84□□□□□ -0.03
RDH11-207ENST00000554731 HOMER2Q9NSB8 354 aa14.84□□□□□ -0.03
RDH11-207ENST00000554731 TBX21Q9UL17 535 aa14.84□□□□□ -0.03
RDH11-207ENST00000554731 TTC41PQ6P2S7 1318 aa14.84□□□□□ -0.03
RDH11-207ENST00000554731 A0A0U1RQG5 324 aaPredicted RBP14.83□□□□□ -0.04
RDH11-207ENST00000554731 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.83□□□□□ -0.04
RDH11-207ENST00000554731 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.83□□□□□ -0.04
RDH11-207ENST00000554731 ADCY6O43306 1168 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 ASGR1P07306 291 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 STAT2P52630 851 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 GJA9P57773 515 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 TFAP4Q01664 338 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 PPARAQ07869 468 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 IKQ13123 557 aaPredicted RBP14.83□□□□□ -0.04
RDH11-207ENST00000554731 GNASQ5JWF2 1037 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 CCDC174Q6PII3 467 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 FAM160B2Q86V87 743 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 CCDC144CPQ8IYA2 1237 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 CHURC1Q8WUH1 139 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 SEC62Q99442 399 aaKnown RBP14.83□□□□□ -0.04
RDH11-207ENST00000554731 FSD1Q9BTV5 496 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 ACAD9Q9H845 621 aa14.83□□□□□ -0.04
RDH11-207ENST00000554731 UNC80Q8N2C7 3258 aa14.82□□□□□ -0.04
RDH11-207ENST00000554731 SLC1A4P43007 532 aa14.82□□□□□ -0.04
RDH11-207ENST00000554731 CDK7P50613 346 aa14.82□□□□□ -0.04
RDH11-207ENST00000554731 IRX5P78411 483 aaPredicted RBP14.82□□□□□ -0.04
RDH11-207ENST00000554731 CNTN2Q02246 1040 aa14.82□□□□□ -0.04
RDH11-207ENST00000554731 PPIGQ13427 754 aaKnown RBP eCLIP14.82□□□□□ -0.04
RDH11-207ENST00000554731 ZMYM1Q5SVZ6 1142 aa14.82□□□□□ -0.04
RDH11-207ENST00000554731 MFSD5Q6N075 450 aa14.82□□□□□ -0.04
RDH11-207ENST00000554731 STAG1Q8WVM7 1258 aa14.82□□□□□ -0.04
RDH11-207ENST00000554731 GMCL1Q96IK5 515 aa14.82□□□□□ -0.04
RDH11-207ENST00000554731 MCM3APO60318 1980 aa14.82□□□□□ -0.04
RDH11-207ENST00000554731 ARVCFO00192 962 aa14.81□□□□□ -0.04
RDH11-207ENST00000554731 TLR3O15455 904 aaKnown RBP14.81□□□□□ -0.04
RDH11-207ENST00000554731 DNAJB2P25686 324 aa14.81□□□□□ -0.04
RDH11-207ENST00000554731 TKFCQ3LXA3 575 aa14.81□□□□□ -0.04
RDH11-207ENST00000554731 NOL8Q76FK4 1167 aaKnown RBP14.81□□□□□ -0.04
RDH11-207ENST00000554731 FAM133AQ8N9E0 248 aa14.81□□□□□ -0.04
RDH11-207ENST00000554731 PI4K2BQ8TCG2 481 aa14.81□□□□□ -0.04
RDH11-207ENST00000554731 AGBL1Q96MI9 1066 aa14.81□□□□□ -0.04
RDH11-207ENST00000554731 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.81□□□□□ -0.047e-9■■□□□ 11.4
RDH11-207ENST00000554731 KATNBL1Q9H079 304 aa14.81□□□□□ -0.04
RDH11-207ENST00000554731 A1CFQ9NQ94 594 aaKnown RBP14.81□□□□□ -0.04
RDH11-207ENST00000554731 RNF146Q9NTX7 359 aa14.81□□□□□ -0.04
RDH11-207ENST00000554731 ASB14A6NK59 587 aa14.8□□□□□ -0.04
RDH11-207ENST00000554731 MCCP23508 829 aa14.8□□□□□ -0.04
RDH11-207ENST00000554731 TNFAIP2Q03169 654 aa14.8□□□□□ -0.04
RDH11-207ENST00000554731 TMEM199Q8N511 208 aa14.8□□□□□ -0.04
RDH11-207ENST00000554731 CHMP4CQ96CF2 233 aa14.8□□□□□ -0.04
RDH11-207ENST00000554731 TRERF1Q96PN7 1200 aa14.8□□□□□ -0.04
RDH11-207ENST00000554731 STX8Q9UNK0 236 aa14.8□□□□□ -0.04
RDH11-207ENST00000554731 ZNF536O15090 1300 aa14.8□□□□□ -0.04
RDH11-207ENST00000554731 SOWAHBA6NEL2 793 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 TSPY2A6NKD2 308 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 CTAGE5O15320 804 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 PLA2G6O60733 806 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 ALAS1P13196 640 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 NKX3-2P78367 333 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 BEX3Q00994 111 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 GRIN2CQ14957 1233 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 TMEM240Q5SV17 173 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 RCSD1Q6JBY9 416 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 FAM126BQ8IXS8 530 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 OTUD7AQ8TE49 926 aaPredicted RBP14.79□□□□□ -0.04
RDH11-207ENST00000554731 TIFAQ96CG3 184 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 PPP1R12CQ9BZL4 782 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 ZNF576Q9H609 170 aa14.79□□□□□ -0.04
RDH11-207ENST00000554731 TTC28Q96AY4 2481 aa14.78□□□□□ -0.04
RDH11-207ENST00000554731 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.78□□□□□ -0.04
RDH11-207ENST00000554731 CABYRO75952 493 aa14.78□□□□□ -0.04
RDH11-207ENST00000554731 CSF2RAP15509 400 aa14.78□□□□□ -0.04
RDH11-207ENST00000554731 MX1P20591 662 aa14.78□□□□□ -0.04
RDH11-207ENST00000554731 PSRC1Q6PGN9 363 aaPredicted RBP14.78□□□□□ -0.04
RDH11-207ENST00000554731 CCDC129Q6ZRS4 1044 aa14.78□□□□□ -0.04
RDH11-207ENST00000554731 KCTD1Q719H9 257 aa14.78□□□□□ -0.04
RDH11-207ENST00000554731 C16orf59Q7L2K0 433 aa14.78□□□□□ -0.04
RDH11-207ENST00000554731 TLK2Q86UE8 772 aa14.78□□□□□ -0.04
RDH11-207ENST00000554731 AP5M1Q9H0R1 490 aa14.78□□□□□ -0.04
RDH11-207ENST00000554731 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms