RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 NAP1L2Q9ULW6 460 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-207ENST00000554439 CHD2O14647 1828 aaKnown RBP2.96□□□□□ -1.94
PRPF39-207ENST00000554439 SBNO1A3KN83 1393 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 PXDNLA1KZ92 1463 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 LRRC37A3O60309 1634 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 NALCNQ8IZF0 1738 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 EREGO14944 169 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 POLR3DP05423 398 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-207ENST00000554439 HOXC9P31274 260 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 ME1P48163 572 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 NDUFA8P51970 172 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 RELBQ01201 579 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 APOBRQ0VD83 1088 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 ANKRD1Q15327 319 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 CCDC93Q567U6 631 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 HSP90AB4PQ58FF6 505 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 TMEM214Q6NUQ4 689 aaKnown RBP2.96□□□□□ -1.94
PRPF39-207ENST00000554439 MPRIPQ6WCQ1 1025 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 STOX1Q6ZVD7 989 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 ZNF438Q7Z4V0 828 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 VPS37DQ86XT2 251 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 GALNT12Q8IXK2 581 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 FSIP1Q8NA03 581 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 NGDNQ8NEJ9 315 aaKnown RBP2.96□□□□□ -1.94
PRPF39-207ENST00000554439 ENGASEQ8NFI3 743 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 NLRP3Q96P20 1036 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 SLC26A8Q96RN1 970 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 ELP3Q9H9T3 547 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 GJB4Q9NTQ9 266 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 IFNKQ9P0W0 207 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 CNTN3Q9P232 1028 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 MED23Q9ULK4 1368 aa2.96□□□□□ -1.94
PRPF39-207ENST00000554439 RGPD8O14715 1765 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-207ENST00000554439 PTPDC1A2A3K4 754 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 CCDC66A2RUB6 948 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 SOBPA7XYQ1 873 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 HTATSF1O43719 755 aaKnown RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 KINO60870 393 aaKnown RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 SASH3O75995 380 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 ZIC2O95409 532 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 CYP21A2P08686 494 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 ATP1A3P13637 1013 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 CYP2C19P33261 490 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 HSP90AA4PQ58FG1 418 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 CCDC73Q6ZRK6 1079 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 BTLAQ7Z6A9 289 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 HOMER1Q86YM7 354 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 RAB11FIP4Q86YS3 637 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 C1orf127Q8N9H9 656 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 NSUN7Q8NE18 718 aaKnown RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 CCDC34Q96HJ3 373 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 NEK1Q96PY6 1258 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 NOC4LQ9BVI4 516 aaKnown RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 L2HGDHQ9H9P8 463 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 ZDHHC3Q9NYG2 299 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 DNAI1Q9UI46 699 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 RCOR1Q9UKL0 485 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 CFAP45Q9UL16 551 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 PCDHA7Q9UN72 937 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 RTCBQ9Y3I0 505 aaKnown RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.95□□□□□ -1.946e-8■□□□□ 9.4
PRPF39-207ENST00000554439 ADGRL3Q9HAR2 1447 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 MYH15Q9Y2K3 1946 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 NWD1Q149M9 1564 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 NEO1Q92859 1461 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 ZNF609O15014 1411 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 NEDD4P46934 1319 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 SLC35F4A4IF30 521 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 UBAP1LF5GYI3 381 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 TULP2O00295 520 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 KLF4O43474 513 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 NEMFO60524 1076 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 GPC1P35052 558 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 ETFBP38117 255 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 PIP4K2AP48426 406 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 RNF144AP50876 292 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 ARSDP51689 593 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 FAM160A1Q05DH4 1040 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 TEFQ10587 303 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 G3BP1Q13283 466 aaKnown RBP eCLIP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 MTX1Q13505 466 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 EPHA10Q5JZY3 1008 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 PEAR1Q5VY43 1037 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 DDX46Q7L014 1031 aaKnown RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 CERS3Q8IU89 383 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 CEP57L1Q8IYX8 460 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 FMR1NBQ8N0W7 255 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 CCDC155Q8N6L0 562 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 DPF2Q92785 391 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 SMARCE1Q969G3 411 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 EAF1Q96JC9 268 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 SEC16BQ96JE7 1060 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 SDF4Q9BRK5 362 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 RSRP1Q9BUV0 290 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 CARD6Q9BX69 1037 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 OSBPL5Q9H0X9 879 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-207ENST00000554439 NEUROD4Q9HD90 331 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 KCNQ5Q9NR82 932 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 ANO10Q9NW15 660 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms