RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 C12orf49Q9H741 205 aa7.22□□□□□ -1.25
VPS33B-203ENST00000554264 PARP2Q9UGN5 583 aa7.22□□□□□ -1.25
VPS33B-203ENST00000554264 LOC100289279A0A1B0GTE1 492 aa7.21□□□□□ -1.26
VPS33B-203ENST00000554264 GIPC1O14908 333 aa7.21□□□□□ -1.26
VPS33B-203ENST00000554264 BMP2KLQ5H9B9 411 aa7.21□□□□□ -1.26
VPS33B-203ENST00000554264 CLEC17AQ6ZS10 378 aa7.21□□□□□ -1.26
VPS33B-203ENST00000554264 Q6ZS46 218 aa7.21□□□□□ -1.26
VPS33B-203ENST00000554264 STK35Q8TDR2 534 aa7.21□□□□□ -1.26
VPS33B-203ENST00000554264 ANP32BQ92688 251 aaKnown RBP7.21□□□□□ -1.26
VPS33B-203ENST00000554264 PRDM10Q9NQV6 1147 aa7.21□□□□□ -1.26
VPS33B-203ENST00000554264 AK5Q9Y6K8 562 aa7.21□□□□□ -1.26
VPS33B-203ENST00000554264 SOS1Q07889 1333 aaPredicted RBP7.21□□□□□ -1.26
VPS33B-203ENST00000554264 SBF1O95248 1867 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 H0YIN7 160 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 SERPINB2P05120 415 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 ERCC3P19447 782 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 MAOBP27338 520 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 TERF1P54274 439 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 DAB2P98082 770 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 NUCB1Q02818 461 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 LMOD3Q0VAK6 560 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 NFIXQ14938 502 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 INTS5Q6P9B9 1019 aaKnown RBP7.2□□□□□ -1.26
VPS33B-203ENST00000554264 C2CD5Q86YS7 1000 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 USP26Q9BXU7 913 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 SLKQ9H2G2 1235 aaPredicted RBP7.2□□□□□ -1.26
VPS33B-203ENST00000554264 SMC4Q9NTJ3 1288 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 NARFQ9UHQ1 456 aa7.2□□□□□ -1.26
VPS33B-203ENST00000554264 MYH14Q7Z406 1995 aaKnown RBP7.2□□□□□ -1.26
VPS33B-203ENST00000554264 RRP9O43818 475 aaKnown RBP7.19□□□□□ -1.26
VPS33B-203ENST00000554264 FBXO24O75426 580 aa7.19□□□□□ -1.26
VPS33B-203ENST00000554264 FURINP09958 794 aa7.19□□□□□ -1.26
VPS33B-203ENST00000554264 USP17L7P0C7H9 530 aa7.19□□□□□ -1.26
VPS33B-203ENST00000554264 U2AF1L5P0DN76 240 aaPredicted RBP7.19□□□□□ -1.26
VPS33B-203ENST00000554264 XRCC5P13010 732 aaKnown RBP7.19□□□□□ -1.26
VPS33B-203ENST00000554264 TNNT2P45379 298 aaPredicted RBP7.19□□□□□ -1.26
VPS33B-203ENST00000554264 CTCFP49711 727 aaPredicted RBP7.19□□□□□ -1.26
VPS33B-203ENST00000554264 U2AF1Q01081 240 aaKnown RBP eCLIP7.19□□□□□ -1.26
VPS33B-203ENST00000554264 HS1BP3Q53T59 392 aa7.19□□□□□ -1.26
VPS33B-203ENST00000554264 SKAP1Q86WV1 359 aa7.19□□□□□ -1.26
VPS33B-203ENST00000554264 DNAJC10Q8IXB1 793 aa7.19□□□□□ -1.26
VPS33B-203ENST00000554264 TRIM44Q96DX7 344 aaPredicted RBP7.19□□□□□ -1.26
VPS33B-203ENST00000554264 SRCIN1Q9C0H9 1055 aa7.19□□□□□ -1.26
VPS33B-203ENST00000554264 COL15A1P39059 1388 aa7.19□□□□□ -1.26
VPS33B-203ENST00000554264 CNTNAP1P78357 1384 aa7.19□□□□□ -1.26
VPS33B-203ENST00000554264 IQCA1LA6NCM1 817 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 FOXN1O15353 648 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 TPM2P07951 284 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 CTSHP09668 335 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 CYP19A1P11511 503 aaPredicted RBP7.18□□□□□ -1.26
VPS33B-203ENST00000554264 GSTT1P30711 240 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 DDIT3P35638 169 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 TMPOP42166 694 aaKnown RBP7.18□□□□□ -1.26
VPS33B-203ENST00000554264 RSPO4Q2I0M5 234 aaPredicted RBP7.18□□□□□ -1.26
VPS33B-203ENST00000554264 AKAP4Q5JQC9 854 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 NKAPLQ5M9Q1 402 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 FRMD6Q96NE9 622 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 NECAB3Q96P71 396 aaPredicted RBP7.18□□□□□ -1.26
VPS33B-203ENST00000554264 RUSC1Q9BVN2 902 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 SLC52A2Q9HAB3 445 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 GRPEL1Q9HAV7 217 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 ZBTB40Q9NUA8 1239 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 FAM8A1Q9UBU6 413 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 TJP1Q07157 1748 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 TIAM2Q8IVF5 1701 aa7.18□□□□□ -1.26
VPS33B-203ENST00000554264 ADAMTS7Q9UKP4 1686 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 A0A087WZG4 1122 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 MEGF11A6BM72 1044 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 ENC1O14682 589 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 PAGE1O75459 146 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 RLBP1P12271 317 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 XRCC6P12956 609 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS33B-203ENST00000554264 TRIM27P14373 513 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 GLB1P16278 677 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 PDE6BP35913 854 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 NUCB2P80303 420 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 CCDC173Q0VFZ6 552 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 RAB3GAP1Q15042 981 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 POU4F3Q15319 338 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 SOGA3Q5TF21 947 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 TPTE2Q6XPS3 522 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 TMC4Q7Z404 712 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 CHD1LQ86WJ1 897 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 LDHDQ86WU2 507 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 ITPRIPQ8IWB1 547 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 PLEKHF1Q96S99 279 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 BRIP1Q9BX63 1249 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 BCL2L13Q9BXK5 485 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 TMPRSS13Q9BYE2 586 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 TAOK3Q9H2K8 898 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 TMEM39AQ9NV64 488 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 NRXN2Q9P2S2 1712 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 LTBP3Q9NS15 1303 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 DLEC1Q9Y238 1755 aa7.17□□□□□ -1.26
VPS33B-203ENST00000554264 DIAPH1O60610 1272 aaKnown RBP7.16□□□□□ -1.26
VPS33B-203ENST00000554264 EIF4BP23588 611 aaKnown RBP7.16□□□□□ -1.26
VPS33B-203ENST00000554264 ITGB7P26010 798 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 GNAI1P63096 354 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 RABEP1Q15276 862 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 EXOSC6Q5RKV6 272 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms