RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 MYH4Q9Y623 1939 aa16.66■□□□□ 0.26
NEDD1-206ENST00000554226 MBD4O95243 580 aa16.66■□□□□ 0.26
NEDD1-206ENST00000554226 IRX5P78411 483 aaPredicted RBP16.66■□□□□ 0.26
NEDD1-206ENST00000554226 CYP2D7A0A087X1C5 515 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 APBB1O00213 710 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 RLBP1P12271 317 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 POU3F3P20264 500 aaPredicted RBP16.65■□□□□ 0.26
NEDD1-206ENST00000554226 KCNA4P22459 653 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 OAZ1P54368 228 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 TFF2Q03403 129 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 GNASQ5JWF2 1037 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 ITPRIPQ8IWB1 547 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
NEDD1-206ENST00000554226 IL1RAPL2Q9NP60 686 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 NYAP2Q9P242 653 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 FBXO40Q9UH90 709 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 SYNPO2Q9UMS6 1093 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 HCN4Q9Y3Q4 1203 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 TCF20Q9UGU0 1960 aaKnown RBP16.65■□□□□ 0.26
NEDD1-206ENST00000554226 PIEZO1Q92508 2521 aa16.65■□□□□ 0.26
NEDD1-206ENST00000554226 CABYRO75952 493 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 FGBP02675 491 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 CYP2C18P33260 490 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 KCNQ1P51787 676 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 UBE3CQ15386 1083 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 AAK1Q2M2I8 961 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 CTR9Q6PD62 1173 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 ARMCX2Q7L311 632 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 CLASRPQ8N2M8 674 aaKnown RBP16.64■□□□□ 0.25
NEDD1-206ENST00000554226 CHST13Q8NET6 341 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 DDRGK1Q96HY6 314 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 DNAJC2Q99543 621 aaKnown RBP16.64■□□□□ 0.25
NEDD1-206ENST00000554226 LRFN3Q9BTN0 628 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 SLC38A10Q9HBR0 1119 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 PAG1Q9NWQ8 432 aa16.64■□□□□ 0.25
NEDD1-206ENST00000554226 F5H6K3 240 aa16.63■□□□□ 0.25
NEDD1-206ENST00000554226 ERC2O15083 957 aa16.63■□□□□ 0.25
NEDD1-206ENST00000554226 NDUFB10O96000 172 aa16.63■□□□□ 0.25
NEDD1-206ENST00000554226 KLRC3Q07444 240 aa16.63■□□□□ 0.25
NEDD1-206ENST00000554226 KIF1BPQ96EK5 621 aa16.63■□□□□ 0.25
NEDD1-206ENST00000554226 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.63■□□□□ 0.25
NEDD1-206ENST00000554226 HIPK3Q9H422 1215 aa16.63■□□□□ 0.25
NEDD1-206ENST00000554226 ARPP21Q9UBL0 812 aaPredicted RBP16.63■□□□□ 0.25
NEDD1-206ENST00000554226 PCDHA11Q9Y5I1 949 aa16.63■□□□□ 0.25
NEDD1-206ENST00000554226 PRRC2BQ5JSZ5 2229 aaKnown RBP16.63■□□□□ 0.25
NEDD1-206ENST00000554226 ATP5JP18859 108 aa16.62■□□□□ 0.25
NEDD1-206ENST00000554226 SBK1Q52WX2 424 aa16.62■□□□□ 0.25
NEDD1-206ENST00000554226 PPP2R2DQ66LE6 453 aa16.62■□□□□ 0.25
NEDD1-206ENST00000554226 MICALL1Q8N3F8 863 aa16.62■□□□□ 0.25
NEDD1-206ENST00000554226 VTI1AQ96AJ9 217 aa16.62■□□□□ 0.25
NEDD1-206ENST00000554226 NUP88Q99567 741 aaPredicted RBP16.62■□□□□ 0.25
NEDD1-206ENST00000554226 NOC4LQ9BVI4 516 aaKnown RBP16.62■□□□□ 0.25
NEDD1-206ENST00000554226 EPHX3Q9H6B9 360 aa16.62■□□□□ 0.25
NEDD1-206ENST00000554226 GNEQ9Y223 722 aaKnown RBP16.62■□□□□ 0.25
NEDD1-206ENST00000554226 ASTN1O14525 1302 aa16.62■□□□□ 0.25
NEDD1-206ENST00000554226 IGKV6D-41A0A0C4DH26 115 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 CCER2I3L3R5 266 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 ZBED4O75132 1171 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 RASA1P20936 1047 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 OTOP2Q7RTS6 562 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 CCDC144CPQ8IYA2 1237 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 ANKRD35Q8N283 1001 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 FAM133AQ8N9E0 248 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 MKL1Q969V6 931 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 VWCEQ96DN2 955 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 HAUS7Q99871 368 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 GRIN2DO15399 1336 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 UMODL1Q5DID0 1318 aa16.61■□□□□ 0.25
NEDD1-206ENST00000554226 PFKMP08237 780 aa16.6■□□□□ 0.25
NEDD1-206ENST00000554226 IFIT2P09913 472 aaKnown RBP16.6■□□□□ 0.25
NEDD1-206ENST00000554226 FDX1P10109 184 aa16.6■□□□□ 0.25
NEDD1-206ENST00000554226 RABGGTBP53611 331 aa16.6■□□□□ 0.25
NEDD1-206ENST00000554226 SLFNL1Q499Z3 407 aa16.6■□□□□ 0.25
NEDD1-206ENST00000554226 GIMAP6Q6P9H5 292 aa16.6■□□□□ 0.25
NEDD1-206ENST00000554226 WNT8AQ9H1J5 351 aa16.6■□□□□ 0.25
NEDD1-206ENST00000554226 FEM1BQ9UK73 627 aa16.6■□□□□ 0.25
NEDD1-206ENST00000554226 Q9Y3F1 56 aa16.6■□□□□ 0.25
NEDD1-206ENST00000554226 SLC4A4Q9Y6R1 1079 aa16.6■□□□□ 0.25
NEDD1-206ENST00000554226 MYOGP15173 224 aa16.59■□□□□ 0.25
NEDD1-206ENST00000554226 TNFAIP2Q03169 654 aa16.59■□□□□ 0.25
NEDD1-206ENST00000554226 ITGA7Q13683 1181 aa16.59■□□□□ 0.25
NEDD1-206ENST00000554226 TMEM31Q5JXX7 168 aa16.59■□□□□ 0.25
NEDD1-206ENST00000554226 CXCL17Q6UXB2 119 aa16.59■□□□□ 0.25
NEDD1-206ENST00000554226 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
NEDD1-206ENST00000554226 RPUSD2Q8IZ73 545 aaKnown RBP16.59■□□□□ 0.25
NEDD1-206ENST00000554226 CPXCR1Q8N123 301 aa16.59■□□□□ 0.25
NEDD1-206ENST00000554226 GMCL1P1Q8NEA9 526 aa16.59■□□□□ 0.25
NEDD1-206ENST00000554226 RAVER2Q9HCJ3 691 aaKnown RBP16.59■□□□□ 0.25
NEDD1-206ENST00000554226 MTCH2Q9Y6C9 303 aa16.59■□□□□ 0.25
NEDD1-206ENST00000554226 SLC4A7Q9Y6M7 1214 aa16.59■□□□□ 0.25
NEDD1-206ENST00000554226 LCTP09848 1927 aa16.58■□□□□ 0.25
NEDD1-206ENST00000554226 RAD21O60216 631 aa16.58■□□□□ 0.24
NEDD1-206ENST00000554226 BEX3Q00994 111 aa16.58■□□□□ 0.24
NEDD1-206ENST00000554226 SKIV2LQ15477 1246 aaKnown RBP16.58■□□□□ 0.24
NEDD1-206ENST00000554226 FSCN1Q16658 493 aaKnown RBP16.58■□□□□ 0.24
NEDD1-206ENST00000554226 TLK2Q86UE8 772 aa16.58■□□□□ 0.24
NEDD1-206ENST00000554226 AGBL1Q96MI9 1066 aa16.58■□□□□ 0.24
NEDD1-206ENST00000554226 PLIN4Q96Q06 1357 aa16.58■□□□□ 0.24
NEDD1-206ENST00000554226 TANC1Q9C0D5 1861 aa16.58■□□□□ 0.24
NEDD1-206ENST00000554226 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms