RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 A0A0G2JMZ2 1700 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 ZNF536O15090 1300 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 FRMPD2Q68DX3 1309 aaPredicted RBP10.89□□□□□ -0.67
CHD8-206ENST00000553870 DOCK3Q8IZD9 2030 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 PARP14Q460N5 1801 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 CCDC69A6NI79 296 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 CCDC85CA6NKD9 419 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 HMGCRP04035 888 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 CYP2B6P20813 491 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 KIF5BP33176 963 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 SLC16A2P36021 539 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 GNAQP50148 359 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 TRAF1Q13077 416 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 GRM4Q14833 912 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 IFFO2Q5TF58 517 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 OLFML2BQ68BL8 750 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 SYNE3Q6ZMZ3 975 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 MMP19Q99542 508 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 TMEM106CQ9BVX2 250 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 TM6SF1Q9BZW5 370 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 BIN2Q9UBW5 565 aaPredicted RBP10.89□□□□□ -0.67
CHD8-206ENST00000553870 RIPK3Q9Y572 518 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 SLC12A7Q9Y666 1083 aa10.89□□□□□ -0.67
CHD8-206ENST00000553870 KLRF2D3W0D1 207 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 GOLGA8HP0CJ92 632 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 ADORA2AP29274 412 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 RCAN1P53805 252 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 ANAPC15P60006 121 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 PPP2R5BQ15173 497 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 ADCK5Q3MIX3 580 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 NFXL1Q6ZNB6 911 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 ADGRF4Q8IZF3 695 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 ZNF654Q8IZM8 581 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 MSL3Q8N5Y2 521 aaKnown RBP10.88□□□□□ -0.67
CHD8-206ENST00000553870 DDX11Q96FC9 970 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 TRERF1Q96PN7 1200 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 RIOX1Q9H6W3 641 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 ACAD9Q9H845 621 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 MAD2L2Q9UI95 211 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 CCPG1Q9ULG6 757 aa10.88□□□□□ -0.67
CHD8-206ENST00000553870 COBLO75128 1261 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 IGHA2P01877 340 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 ZNF792Q3KQV3 632 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 MFSD14CQ5VZR4 134 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 CCDC174Q6PII3 467 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 RASGRP2Q7LDG7 609 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 ANKRD35Q8N283 1001 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 STAG2Q8N3U4 1231 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 RGS22Q8NE09 1264 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 CTCFLQ8NI51 663 aaPredicted RBP10.87□□□□□ -0.67
CHD8-206ENST00000553870 SH3TC2Q8TF17 1288 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 CHMP4CQ96CF2 233 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 MTMR8Q96EF0 704 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 AGBL1Q96MI9 1066 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 JAKMIP1Q96N16 626 aaKnown RBP10.87□□□□□ -0.67
CHD8-206ENST00000553870 UBA5Q9GZZ9 404 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 SENP2Q9HC62 589 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 RNF146Q9NTX7 359 aa10.87□□□□□ -0.67
CHD8-206ENST00000553870 PFASO15067 1338 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 RPTORQ8N122 1335 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 DNAJC25-GNG10A0A024R161 153 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 ZBTB5O15062 677 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 INHAP05111 366 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 GJB1P08034 283 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 ALAS1P13196 640 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 ELNP15502 786 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 RPS6KB1P23443 525 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 SLC4A3P48751 1232 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 FGD1P98174 961 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 MAP3K21Q5TCX8 1036 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 RUFY3Q7L099 469 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 ZNF467Q7Z7K2 595 aaPredicted RBP10.86□□□□□ -0.67
CHD8-206ENST00000553870 SAMD3Q8N6K7 520 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 FANCBQ8NB91 859 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 NPLOC4Q8TAT6 608 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 NUP133Q8WUM0 1156 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 TRIB2Q92519 343 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 IL17RAQ96F46 866 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 AGXT2Q9BYV1 514 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 JMJD4Q9H9V9 463 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 HMX1Q9NP08 348 aaPredicted RBP10.86□□□□□ -0.67
CHD8-206ENST00000553870 NRBP1Q9UHY1 535 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 CYP46A1Q9Y6A2 500 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 ZSWIM8A7E2V4 1837 aa10.86□□□□□ -0.67
CHD8-206ENST00000553870 LOC102724159A0A0B4J2E5 919 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 CCDC196A0A1B0GTZ2 297 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 DHX16O60231 1041 aaKnown RBP10.85□□□□□ -0.67
CHD8-206ENST00000553870 CCL5P13501 91 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 CASTP20810 708 aaKnown RBP10.85□□□□□ -0.67
CHD8-206ENST00000553870 RGS19P49795 217 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 SNAP25P60880 206 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 PWP2Q15269 919 aaKnown RBP10.85□□□□□ -0.67
CHD8-206ENST00000553870 CDC37Q16543 378 aaPredicted RBP10.85□□□□□ -0.67
CHD8-206ENST00000553870 MAMDC4Q6UXC1 1216 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 FBXO11Q86XK2 927 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 MAML3Q96JK9 1138 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 TINF2Q9BSI4 451 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 SPZ1Q9BXG8 430 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms