RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 LINC00301Q8NCQ3 95 aa20.17■□□□□ 0.82
PSEN1-206ENST00000553447 NOL7Q9UMY1 257 aaKnown RBP20.17■□□□□ 0.82
PSEN1-206ENST00000553447 PCDHA6Q9UN73 950 aa20.17■□□□□ 0.82
PSEN1-206ENST00000553447 PCDHA8Q9Y5H6 950 aa20.17■□□□□ 0.82
PSEN1-206ENST00000553447 CSADQ9Y600 493 aa20.17■□□□□ 0.82
PSEN1-206ENST00000553447 C19orf81C9J6K1 198 aa20.16■□□□□ 0.82
PSEN1-206ENST00000553447 SNAP25P60880 206 aa20.16■□□□□ 0.82
PSEN1-206ENST00000553447 SF3A1Q15459 793 aaKnown RBP20.16■□□□□ 0.82
PSEN1-206ENST00000553447 MAP3K11Q16584 847 aa20.16■□□□□ 0.82
PSEN1-206ENST00000553447 NOM1Q5C9Z4 860 aaKnown RBP20.16■□□□□ 0.82
PSEN1-206ENST00000553447 C12orf42Q96LP6 360 aa20.16■□□□□ 0.82
PSEN1-206ENST00000553447 AMNQ9BXJ7 453 aa20.16■□□□□ 0.82
PSEN1-206ENST00000553447 TRIM75PA6NK02 468 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 VCAM1P19320 739 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 ADCY7P51828 1080 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 DGKZQ13574 1117 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 MAP1SQ66K74 1059 aaPredicted RBP20.15■□□□□ 0.82
PSEN1-206ENST00000553447 PIK3AP1Q6ZUJ8 805 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 FBXO11Q86XK2 927 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 BICD2Q8TD16 824 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 RASGRP4Q8TDF6 673 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 KCNG4Q8TDN1 519 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 KIFC2Q96AC6 838 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 PGBD1Q96JS3 809 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 RANBP17Q9H2T7 1088 aaKnown RBP20.15■□□□□ 0.82
PSEN1-206ENST00000553447 AFG3L2Q9Y4W6 797 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 LOC285556D6RIA3 1793 aa20.15■□□□□ 0.82
PSEN1-206ENST00000553447 RLFQ13129 1914 aa20.14■□□□□ 0.81
PSEN1-206ENST00000553447 SPTLC2O15270 562 aa20.14■□□□□ 0.81
PSEN1-206ENST00000553447 TTLL12Q14166 644 aaPredicted RBP20.14■□□□□ 0.81
PSEN1-206ENST00000553447 SLC39A14Q15043 492 aa20.14■□□□□ 0.81
PSEN1-206ENST00000553447 PTPAQ15257 358 aa20.14■□□□□ 0.81
PSEN1-206ENST00000553447 ANKRD13AQ8IZ07 590 aa20.14■□□□□ 0.81
PSEN1-206ENST00000553447 RIC8AQ9NPQ8 531 aa20.14■□□□□ 0.81
PSEN1-206ENST00000553447 FBXO28Q9NVF7 368 aa20.14■□□□□ 0.81
PSEN1-206ENST00000553447 PCDHA1Q9Y5I3 950 aa20.14■□□□□ 0.81
PSEN1-206ENST00000553447 CCDC194A0A1B0GVG4 234 aa20.13■□□□□ 0.81
PSEN1-206ENST00000553447 GOLGA6L4A6NEF3 574 aa20.13■□□□□ 0.81
PSEN1-206ENST00000553447 TRAPPC10P48553 1259 aa20.13■□□□□ 0.81
PSEN1-206ENST00000553447 MOB2Q70IA6 237 aa20.13■□□□□ 0.81
PSEN1-206ENST00000553447 ARMC9Q7Z3E5 817 aa20.13■□□□□ 0.81
PSEN1-206ENST00000553447 LDHDQ86WU2 507 aa20.13■□□□□ 0.81
PSEN1-206ENST00000553447 REXO1Q8N1G1 1221 aaKnown RBP20.13■□□□□ 0.81
PSEN1-206ENST00000553447 SLF1Q9BQI6 1058 aa20.13■□□□□ 0.81
PSEN1-206ENST00000553447 RPAP3Q9H6T3 665 aaPredicted RBP20.13■□□□□ 0.81
PSEN1-206ENST00000553447 PCDHB6Q9Y5E3 794 aa20.13■□□□□ 0.81
PSEN1-206ENST00000553447 SMCHD1A6NHR9 2005 aa20.13■□□□□ 0.81
PSEN1-206ENST00000553447 SRCAPQ6ZRS2 3230 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 COL11A1P12107 1806 aaPredicted RBP20.12■□□□□ 0.81
PSEN1-206ENST00000553447 ATP2B1P20020 1258 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 ME1P48163 572 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 HMGCS2P54868 508 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 TRAF1Q13077 416 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 TPRNQ4KMQ1 711 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 SH3D19Q5HYK7 790 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 TTC38Q5R3I4 469 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 KRT25Q7Z3Z0 450 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 CUL5Q93034 780 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 TANGO6Q9C0B7 1094 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 GLT8D2Q9H1C3 349 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 ELP3Q9H9T3 547 aa20.12■□□□□ 0.81
PSEN1-206ENST00000553447 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.12■□□□□ 0.81
PSEN1-206ENST00000553447 TRAF5O00463 557 aa20.11■□□□□ 0.81
PSEN1-206ENST00000553447 PPP6R2O75170 966 aa20.11■□□□□ 0.81
PSEN1-206ENST00000553447 MRPL12P52815 198 aaKnown RBP20.11■□□□□ 0.81
PSEN1-206ENST00000553447 PRPF38AQ8NAV1 312 aaKnown RBP20.11■□□□□ 0.81
PSEN1-206ENST00000553447 RBM46Q8TBY0 533 aaKnown RBP20.11■□□□□ 0.81
PSEN1-206ENST00000553447 CLMNQ96JQ2 1002 aa20.11■□□□□ 0.81
PSEN1-206ENST00000553447 NMRK2Q9NPI5 230 aa20.11■□□□□ 0.81
PSEN1-206ENST00000553447 TMOD4Q9NZQ9 345 aa20.11■□□□□ 0.81
PSEN1-206ENST00000553447 PCDHA7Q9UN72 937 aa20.11■□□□□ 0.81
PSEN1-206ENST00000553447 CEP131Q9UPN4 1083 aa20.11■□□□□ 0.81
PSEN1-206ENST00000553447 FLOT1O75955 427 aa20.1■□□□□ 0.81
PSEN1-206ENST00000553447 CLK2P49760 499 aaKnown RBP20.1■□□□□ 0.81
PSEN1-206ENST00000553447 PPATQ06203 517 aa20.1■□□□□ 0.81
PSEN1-206ENST00000553447 NONOQ15233 471 aaKnown RBP eCLIP20.1■□□□□ 0.81
PSEN1-206ENST00000553447 USH1GQ495M9 461 aa20.1■□□□□ 0.81
PSEN1-206ENST00000553447 CAVIN1Q6NZI2 390 aaKnown RBP20.1■□□□□ 0.81
PSEN1-206ENST00000553447 CCDC174Q6PII3 467 aa20.1■□□□□ 0.81
PSEN1-206ENST00000553447 SAMD1Q6SPF0 538 aaPredicted RBP20.1■□□□□ 0.81
PSEN1-206ENST00000553447 ERO1BQ86YB8 467 aa20.1■□□□□ 0.81
PSEN1-206ENST00000553447 JMYQ8N9B5 988 aa20.1■□□□□ 0.81
PSEN1-206ENST00000553447 CNKSR2Q8WXI2 1034 aa20.1■□□□□ 0.81
PSEN1-206ENST00000553447 PSTPIP2Q9H939 334 aa20.1■□□□□ 0.81
PSEN1-206ENST00000553447 TMEM260Q9NX78 707 aa20.1■□□□□ 0.81
PSEN1-206ENST00000553447 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.1■□□□□ 0.81
PSEN1-206ENST00000553447 BIN2Q9UBW5 565 aaPredicted RBP20.1■□□□□ 0.81
PSEN1-206ENST00000553447 PPP1R9AQ9ULJ8 1098 aa20.1■□□□□ 0.81
PSEN1-206ENST00000553447 MORC2Q9Y6X9 1032 aaPredicted RBP20.1■□□□□ 0.81
PSEN1-206ENST00000553447 RBBP6Q7Z6E9 1792 aaKnown RBP20.1■□□□□ 0.81
PSEN1-206ENST00000553447 MYH7BA7E2Y1 1941 aa20.1■□□□□ 0.81
PSEN1-206ENST00000553447 TRPM7Q96QT4 1865 aa20.09■□□□□ 0.81
PSEN1-206ENST00000553447 SPDYE5A6NIY4 337 aa20.09■□□□□ 0.81
PSEN1-206ENST00000553447 WNT7AO00755 349 aa20.09■□□□□ 0.81
PSEN1-206ENST00000553447 BMP15O95972 392 aa20.09■□□□□ 0.81
PSEN1-206ENST00000553447 LDLRAD1Q5T700 205 aa20.09■□□□□ 0.81
PSEN1-206ENST00000553447 JAKMIP3Q5VZ66 844 aa20.09■□□□□ 0.81
PSEN1-206ENST00000553447 ADALQ6DHV7 355 aa20.09■□□□□ 0.81
PSEN1-206ENST00000553447 TAL1P17542 331 aaPredicted RBP20.08■□□□□ 0.81
PSEN1-206ENST00000553447 MARCKSP29966 332 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms