RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 ARFGEF1Q9Y6D6 1849 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 SPTBN5Q9NRC6 3674 aaKnown RBP4.85□□□□□ -1.63
FOXN3-203ENST00000553353 IQCA1LA6NCM1 817 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 TRAF5O00463 557 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 POLR3DP05423 398 aaPredicted RBP4.85□□□□□ -1.63
FOXN3-203ENST00000553353 RNASE1P07998 156 aaKnown RBP4.85□□□□□ -1.63
FOXN3-203ENST00000553353 SLFN14P0C7P3 912 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 CD8BP10966 210 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 ITPKAP23677 461 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 EPHX2P34913 555 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 BNIP3Q12983 259 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 MTMR3Q13615 1198 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 PDE3AQ14432 1141 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 IFI16Q16666 785 aaKnown RBP4.85□□□□□ -1.63
FOXN3-203ENST00000553353 CIAPIN1Q6FI81 312 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 SPOCD1Q6ZMY3 1216 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 SLC17A8Q8NDX2 589 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 PI4K2BQ8TCG2 481 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 HHIPL1Q96JK4 782 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 ATXN3LQ9H3M9 355 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 FAM53CQ9NYF3 392 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 ABT1Q9ULW3 272 aaKnown RBP4.85□□□□□ -1.63
FOXN3-203ENST00000553353 PCDH11XQ9BZA7 1347 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 PCDH11YQ9BZA8 1340 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 ZNF541Q9H0D2 1346 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 NCAPD2Q15021 1401 aa4.85□□□□□ -1.63
FOXN3-203ENST00000553353 RGPD5Q99666 1765 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 SMG6Q86US8 1419 aaKnown RBP4.84□□□□□ -1.63
FOXN3-203ENST00000553353 FAM155AB1AL88 458 aaPredicted RBP4.84□□□□□ -1.63
FOXN3-203ENST00000553353 ECEL1O95672 775 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 FAM87AP0C7U9 286 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 NFIXQ14938 502 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 PLD6Q8N2A8 252 aaKnown RBP4.84□□□□□ -1.63
FOXN3-203ENST00000553353 USHBP1Q8N6Y0 703 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 LTV1Q96GA3 475 aaPredicted RBP4.84□□□□□ -1.63
FOXN3-203ENST00000553353 FAM84AQ96KN4 292 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 ZNF576Q9H609 170 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 PIDD1Q9HB75 910 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 MBNL3Q9NUK0 354 aaKnown RBP4.84□□□□□ -1.63
FOXN3-203ENST00000553353 CRIM1Q9NZV1 1036 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 HACL1Q9UJ83 578 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 PPP1R9AQ9ULJ8 1098 aa4.84□□□□□ -1.63
FOXN3-203ENST00000553353 SBF1O95248 1867 aa4.83□□□□□ -1.64
FOXN3-203ENST00000553353 TAF1LQ8IZX4 1826 aa4.83□□□□□ -1.64
FOXN3-203ENST00000553353 SNED1Q8TER0 1413 aa4.83□□□□□ -1.64
FOXN3-203ENST00000553353 KTN1Q86UP2 1357 aaKnown RBP4.83□□□□□ -1.64
FOXN3-203ENST00000553353 TMEM265A0A087WTH1 108 aa4.83□□□□□ -1.64
FOXN3-203ENST00000553353 FZD9O00144 591 aa4.83□□□□□ -1.64
FOXN3-203ENST00000553353 TMPRSS2O15393 492 aa4.83□□□□□ -1.64
FOXN3-203ENST00000553353 RFC4P35249 363 aa4.83□□□□□ -1.64
FOXN3-203ENST00000553353 EAPPQ56P03 285 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-203ENST00000553353 RPS26P11Q5JNZ5 115 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-203ENST00000553353 PNMA8AQ86V59 439 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-203ENST00000553353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.83□□□□□ -1.641e-7■■■□□ 14.8
FOXN3-203ENST00000553353 HRASLS5Q96KN8 279 aa4.83□□□□□ -1.64
FOXN3-203ENST00000553353 PRO3102Q9H379 93 aa4.83□□□□□ -1.64
FOXN3-203ENST00000553353 LGR6Q9HBX8 967 aa4.83□□□□□ -1.64
FOXN3-203ENST00000553353 SAGE1Q9NXZ1 904 aa4.83□□□□□ -1.64
FOXN3-203ENST00000553353 RNF123Q5XPI4 1314 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 ID3Q02535 119 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 CDK5R2Q13319 367 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 AOC3Q16853 763 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 ANGEL2Q5VTE6 544 aaKnown RBP4.82□□□□□ -1.64
FOXN3-203ENST00000553353 SLC23A3Q6PIS1 610 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 CTU1Q7Z7A3 348 aaKnown RBP4.82□□□□□ -1.64
FOXN3-203ENST00000553353 SMYD4Q8IYR2 804 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-203ENST00000553353 FANCD2OSQ96PS1 177 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 EHD4Q9H223 541 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 TAOK3Q9H2K8 898 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 KRT82Q9NSB4 513 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 ADAMTS6Q9UKP5 1117 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 GTF3C3Q9Y5Q9 886 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 SNX11Q9Y5W9 270 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 UNC80Q8N2C7 3258 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 MUC3AQ02505 3323 aa4.82□□□□□ -1.64
FOXN3-203ENST00000553353 CEACAM5P06731 702 aa4.81□□□□□ -1.64
FOXN3-203ENST00000553353 CRKLP46109 303 aaKnown RBP4.81□□□□□ -1.64
FOXN3-203ENST00000553353 MESP2Q0VG99 397 aa4.81□□□□□ -1.64
FOXN3-203ENST00000553353 GRM1Q13255 1194 aa4.81□□□□□ -1.64
FOXN3-203ENST00000553353 KIF4BQ2VIQ3 1234 aa4.81□□□□□ -1.64
FOXN3-203ENST00000553353 C2CD5Q86YS7 1000 aa4.81□□□□□ -1.64
FOXN3-203ENST00000553353 FAM181AQ8N9Y4 354 aa4.81□□□□□ -1.64
FOXN3-203ENST00000553353 LRRN4CLQ8ND94 238 aa4.81□□□□□ -1.64
FOXN3-203ENST00000553353 RAPGEF4Q8WZA2 1011 aa4.81□□□□□ -1.64
FOXN3-203ENST00000553353 RNF186Q9NXI6 227 aa4.81□□□□□ -1.64
FOXN3-203ENST00000553353 PGAP2Q9UHJ9 254 aa4.81□□□□□ -1.64
FOXN3-203ENST00000553353 PCOLCE2Q9UKZ9 415 aa4.81□□□□□ -1.64
FOXN3-203ENST00000553353 TIAM2Q8IVF5 1701 aa4.8□□□□□ -1.64
FOXN3-203ENST00000553353 EVC2Q86UK5 1308 aa4.8□□□□□ -1.64
FOXN3-203ENST00000553353 LRRC10BA6NIK2 292 aa4.8□□□□□ -1.64
FOXN3-203ENST00000553353 SERPINB2P05120 415 aa4.8□□□□□ -1.64
FOXN3-203ENST00000553353 LIG1P18858 919 aa4.8□□□□□ -1.64
FOXN3-203ENST00000553353 EPS15P42566 896 aa4.8□□□□□ -1.64
FOXN3-203ENST00000553353 OXCT1P55809 520 aa4.8□□□□□ -1.64
FOXN3-203ENST00000553353 NOGQ13253 232 aa4.8□□□□□ -1.64
FOXN3-203ENST00000553353 PRPF40BQ6NWY9 871 aaKnown RBP4.8□□□□□ -1.64
FOXN3-203ENST00000553353 DUSP23Q9BVJ7 150 aa4.8□□□□□ -1.64
FOXN3-203ENST00000553353 CCDC86Q9H6F5 360 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms