RNA–Protein interactions for RNA: ENST00000553332.5

XRCC3-203, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-203ENST00000553332 ANKS1AQ92625 1134 aa16.83■□□□□ 0.28
XRCC3-203ENST00000553332 ANO2Q9NQ90 1003 aa16.83■□□□□ 0.28
XRCC3-203ENST00000553332 CDC45O75419 566 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 IGHA2P01877 340 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 SNHG28P0DPA3 235 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 ALAS1P13196 640 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 TAL1P17542 331 aaPredicted RBP16.82■□□□□ 0.28
XRCC3-203ENST00000553332 ZNF792Q3KQV3 632 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 PRAMEF19Q5SWL8 479 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 IFIT1BQ5T764 474 aaKnown RBP16.82■□□□□ 0.28
XRCC3-203ENST00000553332 CHST3Q7LGC8 479 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 RALYLQ86SE5 291 aaKnown RBP16.82■□□□□ 0.28
XRCC3-203ENST00000553332 ANKRD35Q8N283 1001 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 TRPV1Q8NER1 839 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 CHST13Q8NET6 341 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 NCOA7Q8NI08 942 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 RNF146Q9NTX7 359 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 FBXO40Q9UH90 709 aa16.82■□□□□ 0.28
XRCC3-203ENST00000553332 SEC23AQ15436 765 aa16.81■□□□□ 0.28
XRCC3-203ENST00000553332 CASC1Q6TDU7 716 aa16.81■□□□□ 0.28
XRCC3-203ENST00000553332 TRERF1Q96PN7 1200 aa16.81■□□□□ 0.28
XRCC3-203ENST00000553332 UBA5Q9GZZ9 404 aa16.81■□□□□ 0.28
XRCC3-203ENST00000553332 RANBP17Q9H2T7 1088 aaKnown RBP16.81■□□□□ 0.28
XRCC3-203ENST00000553332 CPVLQ9H3G5 476 aa16.81■□□□□ 0.28
XRCC3-203ENST00000553332 ACAD9Q9H845 621 aa16.81■□□□□ 0.28
XRCC3-203ENST00000553332 PPP4R2Q9NY27 417 aa16.81■□□□□ 0.28
XRCC3-203ENST00000553332 CCPG1Q9ULG6 757 aa16.81■□□□□ 0.28
XRCC3-203ENST00000553332 MCM3APO60318 1980 aa16.8■□□□□ 0.28
XRCC3-203ENST00000553332 MYH6P13533 1939 aa16.8■□□□□ 0.28
XRCC3-203ENST00000553332 IFIT3O14879 490 aaKnown RBP16.8■□□□□ 0.28
XRCC3-203ENST00000553332 CYBAP13498 195 aa16.8■□□□□ 0.28
XRCC3-203ENST00000553332 GPATCH4Q5T3I0 446 aaKnown RBP16.8■□□□□ 0.28
XRCC3-203ENST00000553332 LHX8Q68G74 356 aa16.8■□□□□ 0.28
XRCC3-203ENST00000553332 UBE2Q1Q7Z7E8 422 aa16.8■□□□□ 0.28
XRCC3-203ENST00000553332 DIS3LQ8TF46 1054 aaKnown RBP16.8■□□□□ 0.28
XRCC3-203ENST00000553332 PAWRQ96IZ0 340 aaKnown RBP16.8■□□□□ 0.28
XRCC3-203ENST00000553332 TINF2Q9BSI4 451 aa16.8■□□□□ 0.28
XRCC3-203ENST00000553332 OGDHLQ9ULD0 1010 aa16.8■□□□□ 0.28
XRCC3-203ENST00000553332 DIS3Q9Y2L1 958 aaKnown RBP16.8■□□□□ 0.28
XRCC3-203ENST00000553332 DNAJC25-GNG10A0A024R161 153 aa16.79■□□□□ 0.28
XRCC3-203ENST00000553332 SLC27A2O14975 620 aa16.79■□□□□ 0.28
XRCC3-203ENST00000553332 ICAM1P05362 532 aa16.79■□□□□ 0.28
XRCC3-203ENST00000553332 CAPN2P17655 700 aa16.79■□□□□ 0.28
XRCC3-203ENST00000553332 TKFCQ3LXA3 575 aa16.79■□□□□ 0.28
XRCC3-203ENST00000553332 MUM1L1Q5H9M0 696 aa16.79■□□□□ 0.28
XRCC3-203ENST00000553332 ANO1Q5XXA6 986 aa16.79■□□□□ 0.28
XRCC3-203ENST00000553332 DDX20Q9UHI6 824 aaKnown RBP16.79■□□□□ 0.28
XRCC3-203ENST00000553332 ERICH2A1L162 156 aa16.78■□□□□ 0.28
XRCC3-203ENST00000553332 PARP1P09874 1014 aaKnown RBP16.78■□□□□ 0.28
XRCC3-203ENST00000553332 ANTXR2P58335 489 aa16.78■□□□□ 0.28
XRCC3-203ENST00000553332 WTAPQ15007 396 aa16.78■□□□□ 0.28
XRCC3-203ENST00000553332 NECTIN1Q15223 517 aa16.78■□□□□ 0.28
XRCC3-203ENST00000553332 ASPRV1Q53RT3 343 aa16.78■□□□□ 0.28
XRCC3-203ENST00000553332 CREB3L3Q68CJ9 461 aa16.78■□□□□ 0.28
XRCC3-203ENST00000553332 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.78■□□□□ 0.285e-6■■■■■ 45.5
XRCC3-203ENST00000553332 MB21D2Q8IYB1 491 aaPredicted RBP16.78■□□□□ 0.28
XRCC3-203ENST00000553332 ANKLE1Q8NAG6 615 aa16.78■□□□□ 0.28
XRCC3-203ENST00000553332 DPF3Q92784 378 aa16.78■□□□□ 0.28
XRCC3-203ENST00000553332 SENP2Q9HC62 589 aa16.78■□□□□ 0.28
XRCC3-203ENST00000553332 A1CFQ9NQ94 594 aaKnown RBP16.78■□□□□ 0.28
XRCC3-203ENST00000553332 POTEB2H3BUK9 544 aa16.77■□□□□ 0.28
XRCC3-203ENST00000553332 DHX16O60231 1041 aaKnown RBP16.77■□□□□ 0.28
XRCC3-203ENST00000553332 MNX1P50219 401 aaPredicted RBP16.77■□□□□ 0.28
XRCC3-203ENST00000553332 CNTN2Q02246 1040 aa16.77■□□□□ 0.28
XRCC3-203ENST00000553332 SART3Q15020 963 aaKnown RBP16.77■□□□□ 0.28
XRCC3-203ENST00000553332 TMEM67Q5HYA8 995 aa16.77■□□□□ 0.28
XRCC3-203ENST00000553332 ERICH6BQ5W0A0 696 aa16.77■□□□□ 0.28
XRCC3-203ENST00000553332 NSMFQ6X4W1 530 aa16.77■□□□□ 0.28
XRCC3-203ENST00000553332 NECAB2Q7Z6G3 386 aa16.77■□□□□ 0.28
XRCC3-203ENST00000553332 ADGRF4Q8IZF3 695 aa16.77■□□□□ 0.28
XRCC3-203ENST00000553332 VAT1LQ9HCJ6 419 aa16.77■□□□□ 0.28
XRCC3-203ENST00000553332 LCTP09848 1927 aa16.76■□□□□ 0.27
XRCC3-203ENST00000553332 ALPK3Q96L96 1907 aa16.76■□□□□ 0.27
XRCC3-203ENST00000553332 SEPT4O43236 478 aa16.76■□□□□ 0.27
XRCC3-203ENST00000553332 MSCO60682 206 aa16.76■□□□□ 0.27
XRCC3-203ENST00000553332 STAG2Q8N3U4 1231 aa16.76■□□□□ 0.27
XRCC3-203ENST00000553332 FGD4Q96M96 766 aa16.76■□□□□ 0.27
XRCC3-203ENST00000553332 HTATIP2Q9BUP3 242 aa16.76■□□□□ 0.27
XRCC3-203ENST00000553332 CNPY2Q9Y2B0 182 aa16.76■□□□□ 0.27
XRCC3-203ENST00000553332 PFASO15067 1338 aa16.75■□□□□ 0.27
XRCC3-203ENST00000553332 PRC1O43663 620 aa16.75■□□□□ 0.27
XRCC3-203ENST00000553332 SNAI1O95863 264 aaPredicted RBP16.75■□□□□ 0.27
XRCC3-203ENST00000553332 MYCNP04198 464 aaPredicted RBP16.75■□□□□ 0.27
XRCC3-203ENST00000553332 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
XRCC3-203ENST00000553332 CDC37Q16543 378 aaPredicted RBP16.75■□□□□ 0.27
XRCC3-203ENST00000553332 USH1GQ495M9 461 aa16.75■□□□□ 0.27
XRCC3-203ENST00000553332 PRPF38BQ5VTL8 546 aaKnown RBP16.75■□□□□ 0.27
XRCC3-203ENST00000553332 ZNF467Q7Z7K2 595 aaPredicted RBP16.75■□□□□ 0.27
XRCC3-203ENST00000553332 IGDCC4Q8TDY8 1250 aa16.75■□□□□ 0.27
XRCC3-203ENST00000553332 C11orf49Q9H6J7 331 aa16.75■□□□□ 0.27
XRCC3-203ENST00000553332 GPHNQ9NQX3 736 aaPredicted RBP16.75■□□□□ 0.27
XRCC3-203ENST00000553332 CYP39A1Q9NYL5 469 aa16.75■□□□□ 0.27
XRCC3-203ENST00000553332 SYNGAP1Q96PV0 1343 aa16.74■□□□□ 0.27
XRCC3-203ENST00000553332 SOWAHBA6NEL2 793 aa16.74■□□□□ 0.27
XRCC3-203ENST00000553332 NFIBO00712 420 aa16.74■□□□□ 0.27
XRCC3-203ENST00000553332 ZNF865P0CJ78 1059 aaPredicted RBP16.74■□□□□ 0.27
XRCC3-203ENST00000553332 MCM5P33992 734 aa16.74■□□□□ 0.27
XRCC3-203ENST00000553332 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
XRCC3-203ENST00000553332 MAMDC4Q6UXC1 1216 aa16.74■□□□□ 0.27
XRCC3-203ENST00000553332 MSL3Q8N5Y2 521 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms