RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ACAD9Q9H845 621 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 HOMER2Q9NSB8 354 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 CNPY2Q9Y2B0 182 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 SMCHD1A6NHR9 2005 aa15.24■□□□□ 0.03
ACTN1-207ENST00000553290 KBTBD13C9JR72 458 aa15.24■□□□□ 0.03
ACTN1-207ENST00000553290 ANO1Q5XXA6 986 aa15.24■□□□□ 0.03
ACTN1-207ENST00000553290 RASGRP2Q7LDG7 609 aa15.24■□□□□ 0.03
ACTN1-207ENST00000553290 IQCA1Q86XH1 822 aa15.24■□□□□ 0.03
ACTN1-207ENST00000553290 DGKHQ86XP1 1220 aa15.24■□□□□ 0.03
ACTN1-207ENST00000553290 AGBL1Q96MI9 1066 aa15.24■□□□□ 0.03
ACTN1-207ENST00000553290 RNF146Q9NTX7 359 aa15.24■□□□□ 0.03
ACTN1-207ENST00000553290 ZNF865P0CJ78 1059 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-207ENST00000553290 RARBP10826 455 aa15.23■□□□□ 0.03
ACTN1-207ENST00000553290 PDHBP11177 359 aa15.23■□□□□ 0.03
ACTN1-207ENST00000553290 ALAS1P13196 640 aa15.23■□□□□ 0.03
ACTN1-207ENST00000553290 AKR1A1P14550 325 aa15.23■□□□□ 0.03
ACTN1-207ENST00000553290 LRRC26Q2I0M4 334 aa15.23■□□□□ 0.03
ACTN1-207ENST00000553290 GJC2Q5T442 439 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-207ENST00000553290 SYDE2Q5VT97 1194 aa15.23■□□□□ 0.03
ACTN1-207ENST00000553290 CCDC174Q6PII3 467 aa15.23■□□□□ 0.03
ACTN1-207ENST00000553290 TRERF1Q96PN7 1200 aa15.23■□□□□ 0.03
ACTN1-207ENST00000553290 KRT23Q9C075 422 aa15.23■□□□□ 0.03
ACTN1-207ENST00000553290 CNNM2Q9H8M5 875 aa15.23■□□□□ 0.03
ACTN1-207ENST00000553290 KDM4AO75164 1064 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 SNAI1O95863 264 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-207ENST00000553290 ICAM1P05362 532 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 SNHG28P0DPA3 235 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 TAL1P17542 331 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-207ENST00000553290 CHMLP26374 656 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 SLC16A2P36021 539 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 LRRC41Q15345 812 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 TTBK2Q6IQ55 1244 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 ZKSCAN3Q9BRR0 538 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 IL25Q9H293 177 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 RANBP17Q9H2T7 1088 aaKnown RBP15.22■□□□□ 0.03
ACTN1-207ENST00000553290 PRO3102Q9H379 93 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 GPCPD1Q9NPB8 672 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 A1CFQ9NQ94 594 aaKnown RBP15.22■□□□□ 0.03
ACTN1-207ENST00000553290 RBM27Q9P2N5 1060 aaKnown RBP15.22■□□□□ 0.03
ACTN1-207ENST00000553290 PNMA2Q9UL42 364 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 CCPG1Q9ULG6 757 aa15.22■□□□□ 0.03
ACTN1-207ENST00000553290 ZMYND8Q9ULU4 1186 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-207ENST00000553290 FRMPD2Q68DX3 1309 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-207ENST00000553290 B4E1Z4 1266 aa15.21■□□□□ 0.03
ACTN1-207ENST00000553290 POTEB2H3BUK9 544 aa15.21■□□□□ 0.03
ACTN1-207ENST00000553290 SNAP25P60880 206 aa15.21■□□□□ 0.03
ACTN1-207ENST00000553290 ZNF543Q08ER8 600 aa15.21■□□□□ 0.03
ACTN1-207ENST00000553290 GPATCH4Q5T3I0 446 aaKnown RBP15.21■□□□□ 0.03
ACTN1-207ENST00000553290 ANKS1AQ92625 1134 aa15.21■□□□□ 0.03
ACTN1-207ENST00000553290 FGD4Q96M96 766 aa15.21■□□□□ 0.03
ACTN1-207ENST00000553290 ZSCAN10Q96SZ4 725 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-207ENST00000553290 ABHD16BQ9H3Z7 469 aa15.21■□□□□ 0.03
ACTN1-207ENST00000553290 XPNPEP3Q9NQH7 507 aa15.21■□□□□ 0.03
ACTN1-207ENST00000553290 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-207ENST00000553290 ZSWIM5Q9P217 1185 aa15.21■□□□□ 0.03
ACTN1-207ENST00000553290 FAM184BQ9ULE4 1060 aa15.21■□□□□ 0.03
ACTN1-207ENST00000553290 RANBP2P49792 3224 aaKnown RBP15.21■□□□□ 0.02
ACTN1-207ENST00000553290 TRIOBPQ9H2D6 2365 aa15.2■□□□□ 0.02
ACTN1-207ENST00000553290 A0A1W2PPC1 479 aa15.2■□□□□ 0.02
ACTN1-207ENST00000553290 MYCNP04198 464 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-207ENST00000553290 FXR1P51114 621 aaKnown RBP eCLIP15.2■□□□□ 0.02
ACTN1-207ENST00000553290 ACVR2BQ13705 512 aa15.2■□□□□ 0.02
ACTN1-207ENST00000553290 ARMCX2Q7L311 632 aa15.2■□□□□ 0.02
ACTN1-207ENST00000553290 RNF180Q86T96 592 aa15.2■□□□□ 0.02
ACTN1-207ENST00000553290 FAM133AQ8N9E0 248 aa15.2■□□□□ 0.02
ACTN1-207ENST00000553290 PNMA1Q8ND90 353 aa15.2■□□□□ 0.02
ACTN1-207ENST00000553290 GDF15Q99988 308 aa15.2■□□□□ 0.02
ACTN1-207ENST00000553290 KAT14Q9H8E8 782 aa15.2■□□□□ 0.02
ACTN1-207ENST00000553290 ZHX1Q9UKY1 873 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-207ENST00000553290 MCM3APO60318 1980 aa15.19■□□□□ 0.02
ACTN1-207ENST00000553290 ASB14A6NK59 587 aa15.19■□□□□ 0.02
ACTN1-207ENST00000553290 SYN1P17600 705 aa15.19■□□□□ 0.02
ACTN1-207ENST00000553290 BMP8BP34820 402 aa15.19■□□□□ 0.02
ACTN1-207ENST00000553290 ATN1P54259 1190 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-207ENST00000553290 CNTN2Q02246 1040 aa15.19■□□□□ 0.02
ACTN1-207ENST00000553290 MUM1L1Q5H9M0 696 aa15.19■□□□□ 0.02
ACTN1-207ENST00000553290 CCDC144CPQ8IYA2 1237 aa15.19■□□□□ 0.02
ACTN1-207ENST00000553290 UBAC1Q9BSL1 405 aa15.19■□□□□ 0.02
ACTN1-207ENST00000553290 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-207ENST00000553290 SOWAHBA6NEL2 793 aa15.18■□□□□ 0.02
ACTN1-207ENST00000553290 SGSM2O43147 1006 aa15.18■□□□□ 0.02
ACTN1-207ENST00000553290 DUSP11O75319 330 aaKnown RBP15.18■□□□□ 0.02
ACTN1-207ENST00000553290 PGK1P00558 417 aa15.18■□□□□ 0.02
ACTN1-207ENST00000553290 ADCYAP1R1P41586 468 aa15.18■□□□□ 0.02
ACTN1-207ENST00000553290 RTP1P59025 263 aa15.18■□□□□ 0.02
ACTN1-207ENST00000553290 TRDNQ13061 729 aa15.18■□□□□ 0.02
ACTN1-207ENST00000553290 NSMFQ6X4W1 530 aa15.18■□□□□ 0.02
ACTN1-207ENST00000553290 SLC39A5Q6ZMH5 540 aa15.18■□□□□ 0.02
ACTN1-207ENST00000553290 ENAHQ8N8S7 591 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-207ENST00000553290 TSEN34Q9BSV6 310 aaKnown RBP15.18■□□□□ 0.02
ACTN1-207ENST00000553290 CYP39A1Q9NYL5 469 aa15.18■□□□□ 0.02
ACTN1-207ENST00000553290 PHF24Q9UPV7 400 aa15.18■□□□□ 0.02
ACTN1-207ENST00000553290 TNKSO95271 1327 aa15.17■□□□□ 0.02
ACTN1-207ENST00000553290 GOLGA8HP0CJ92 632 aa15.17■□□□□ 0.02
ACTN1-207ENST00000553290 PTH1RQ03431 593 aa15.17■□□□□ 0.02
ACTN1-207ENST00000553290 CCDC144BQ3MJ40 725 aa15.17■□□□□ 0.02
ACTN1-207ENST00000553290 ASPRV1Q53RT3 343 aa15.17■□□□□ 0.02
ACTN1-207ENST00000553290 C1orf53Q5VUE5 145 aa15.17■□□□□ 0.02
ACTN1-207ENST00000553290 WDR19Q8NEZ3 1342 aa15.17■□□□□ 0.02
ACTN1-207ENST00000553290 SYNRGQ9UMZ2 1314 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms