RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 LSRQ86X29 649 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-204ENST00000553265 RNF214Q8ND24 703 aa8.52□□□□□ -1.05
PRKCH-204ENST00000553265 ISL2Q96A47 359 aa8.52□□□□□ -1.05
PRKCH-204ENST00000553265 DPH2Q9BQC3 489 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-204ENST00000553265 EHMT1Q9H9B1 1298 aa8.52□□□□□ -1.05
PRKCH-204ENST00000553265 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
PRKCH-204ENST00000553265 STRIP2Q9ULQ0 834 aa8.52□□□□□ -1.05
PRKCH-204ENST00000553265 THRAP3Q9Y2W1 955 aaKnown RBP8.52□□□□□ -1.05
PRKCH-204ENST00000553265 CENPJQ9HC77 1338 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-204ENST00000553265 LTN1O94822 1766 aa8.51□□□□□ -1.05
PRKCH-204ENST00000553265 ATE1O95260 518 aa8.51□□□□□ -1.05
PRKCH-204ENST00000553265 GCP02774 474 aa8.51□□□□□ -1.05
PRKCH-204ENST00000553265 SGO2Q562F6 1265 aa8.51□□□□□ -1.05
PRKCH-204ENST00000553265 OVOS1Q6IE37 1185 aa8.51□□□□□ -1.05
PRKCH-204ENST00000553265 CDPF1Q6NVV7 123 aa8.51□□□□□ -1.05
PRKCH-204ENST00000553265 RUFY4Q6ZNE9 571 aa8.51□□□□□ -1.05
PRKCH-204ENST00000553265 ACSF2Q96CM8 615 aaPredicted RBP8.51□□□□□ -1.05
PRKCH-204ENST00000553265 CEP41Q9BYV8 373 aa8.51□□□□□ -1.05
PRKCH-204ENST00000553265 TNS2Q63HR2 1409 aa8.51□□□□□ -1.05
PRKCH-204ENST00000553265 NKG7Q16617 165 aa8.5□□□□□ -1.05
PRKCH-204ENST00000553265 PTF1AQ7RTS3 328 aa8.5□□□□□ -1.05
PRKCH-204ENST00000553265 TXNRD3Q86VQ6 643 aa8.5□□□□□ -1.05
PRKCH-204ENST00000553265 HNRNPLLQ8WVV9 542 aaKnown RBP8.5□□□□□ -1.05
PRKCH-204ENST00000553265 DCAF5Q96JK2 942 aa8.5□□□□□ -1.05
PRKCH-204ENST00000553265 CRBNQ96SW2 442 aa8.5□□□□□ -1.05
PRKCH-204ENST00000553265 GSX1Q9H4S2 264 aaPredicted RBP8.5□□□□□ -1.05
PRKCH-204ENST00000553265 SSU72Q9NP77 194 aaKnown RBP8.5□□□□□ -1.05
PRKCH-204ENST00000553265 TJP2Q9UDY2 1190 aa8.5□□□□□ -1.05
PRKCH-204ENST00000553265 FAM86C2PA6NEL3 165 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 UPK3BL1B0FP48 263 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 CHURC1-FNTBB4DL54 471 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 UPK3BL2E5RIL1 263 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 RNF225M0QZC1 329 aaPredicted RBP8.49□□□□□ -1.05
PRKCH-204ENST00000553265 SMAD7O15105 426 aaKnown RBP8.49□□□□□ -1.05
PRKCH-204ENST00000553265 FANCGO15287 622 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 GIPRP48546 466 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 USP11P51784 963 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 CD163Q86VB7 1156 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 FBLIM1Q8WUP2 373 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 UTP4Q969X6 686 aaKnown RBP8.49□□□□□ -1.05
PRKCH-204ENST00000553265 FAM46AQ96IP4 442 aaKnown RBP8.49□□□□□ -1.05
PRKCH-204ENST00000553265 DAGLAQ9Y4D2 1042 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 TACC3Q9Y6A5 838 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 CD163L1Q9NR16 1453 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 BTAF1O14981 1849 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 WDR17Q8IZU2 1322 aa8.49□□□□□ -1.05
PRKCH-204ENST00000553265 TUBGCP6Q96RT7 1819 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 C1QTNF9BB2RNN3 333 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 IMPDH2P12268 514 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 EVA1CP58658 441 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.48□□□□□ -1.05
PRKCH-204ENST00000553265 ANKS3Q6ZW76 656 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 SMYD4Q8IYR2 804 aaPredicted RBP8.48□□□□□ -1.05
PRKCH-204ENST00000553265 ARMC10Q8N2F6 343 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 FAM13CQ8NE31 585 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 ZNF507Q8TCN5 953 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 XAGE3Q8WTP9 111 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 TMEM40Q8WWA1 233 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 TMEM87BQ96K49 555 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 STK17AQ9UEE5 414 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 COL24A1Q17RW2 1714 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 QSER1Q2KHR3 1735 aa8.48□□□□□ -1.05
PRKCH-204ENST00000553265 FAM208AQ9UK61 1670 aaKnown RBP8.47□□□□□ -1.05
PRKCH-204ENST00000553265 SHANK3Q9BYB0 1731 aa8.47□□□□□ -1.05
PRKCH-204ENST00000553265 SLC22A31A6NKX4 558 aa8.47□□□□□ -1.05
PRKCH-204ENST00000553265 POLR2BP30876 1174 aaKnown RBP8.47□□□□□ -1.05
PRKCH-204ENST00000553265 ARSHQ5FYA8 562 aa8.47□□□□□ -1.05
PRKCH-204ENST00000553265 TMEM201Q5SNT2 666 aa8.47□□□□□ -1.05
PRKCH-204ENST00000553265 CDC37L1Q7L3B6 337 aa8.47□□□□□ -1.05
PRKCH-204ENST00000553265 ALYREFQ86V81 257 aaKnown RBP8.47□□□□□ -1.05
PRKCH-204ENST00000553265 ARMC5Q96C12 935 aa8.47□□□□□ -1.05
PRKCH-204ENST00000553265 PDGFDQ9GZP0 370 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-204ENST00000553265 ACSS3Q9H6R3 686 aa8.47□□□□□ -1.05
PRKCH-204ENST00000553265 GMIPQ9P107 970 aa8.47□□□□□ -1.05
PRKCH-204ENST00000553265 PRKAG3Q9UGI9 489 aa8.47□□□□□ -1.05
PRKCH-204ENST00000553265 ADAM30Q9UKF2 790 aa8.47□□□□□ -1.05
PRKCH-204ENST00000553265 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.46□□□□□ -1.06
PRKCH-204ENST00000553265 MEIS3P2A8K0S8 358 aa8.46□□□□□ -1.06
PRKCH-204ENST00000553265 PLSCR1O15162 318 aa8.46□□□□□ -1.06
PRKCH-204ENST00000553265 DYNC1LI2O43237 492 aaPredicted RBP8.46□□□□□ -1.06
PRKCH-204ENST00000553265 KCNQ2O43526 872 aa8.46□□□□□ -1.06
PRKCH-204ENST00000553265 NFICP08651 508 aa8.46□□□□□ -1.06
PRKCH-204ENST00000553265 BMP3P12645 472 aa8.46□□□□□ -1.06
PRKCH-204ENST00000553265 PPP2R5EQ16537 467 aa8.46□□□□□ -1.06
PRKCH-204ENST00000553265 PRAMEF13Q5VWM6 474 aa8.46□□□□□ -1.06
PRKCH-204ENST00000553265 HID1Q8IV36 788 aa8.46□□□□□ -1.06
PRKCH-204ENST00000553265 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.46□□□□□ -1.06
PRKCH-204ENST00000553265 MARCH10Q8NA82 808 aaPredicted RBP8.46□□□□□ -1.06
PRKCH-204ENST00000553265 SEMA6CQ9H3T2 930 aa8.46□□□□□ -1.06
PRKCH-204ENST00000553265 SPON1Q9HCB6 807 aa8.46□□□□□ -1.06
PRKCH-204ENST00000553265 SBNO2Q9Y2G9 1366 aa8.46□□□□□ -1.06
PRKCH-204ENST00000553265 YY1P25490 414 aa8.45□□□□□ -1.06
PRKCH-204ENST00000553265 SLBPQ14493 270 aaKnown RBP eCLIP8.45□□□□□ -1.06
PRKCH-204ENST00000553265 DDB1Q16531 1140 aa8.45□□□□□ -1.06
PRKCH-204ENST00000553265 NLRC3Q7RTR2 1065 aa8.45□□□□□ -1.06
PRKCH-204ENST00000553265 ARHGEF25Q86VW2 580 aa8.45□□□□□ -1.06
PRKCH-204ENST00000553265 CKAP2LQ8IYA6 745 aa8.45□□□□□ -1.06
PRKCH-204ENST00000553265 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
PRKCH-204ENST00000553265 RBBP8NLQ8NC74 664 aaPredicted RBP8.45□□□□□ -1.06
PRKCH-204ENST00000553265 ATG4CQ96DT6 458 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms