RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 MUM1L1Q5H9M0 696 aa12.52□□□□□ -0.41
DDX23-217ENST00000553065 C1orf53Q5VUE5 145 aa12.52□□□□□ -0.41
DDX23-217ENST00000553065 TICAM2Q86XR7 235 aa12.52□□□□□ -0.41
DDX23-217ENST00000553065 TBC1D10CQ8IV04 446 aa12.52□□□□□ -0.41
DDX23-217ENST00000553065 RWDD1Q9H446 243 aaPredicted RBP12.52□□□□□ -0.41
DDX23-217ENST00000553065 TCP11L1Q9NUJ3 509 aa12.52□□□□□ -0.41
DDX23-217ENST00000553065 PRR12Q9ULL5 1215 aa12.52□□□□□ -0.41
DDX23-217ENST00000553065 PHF24Q9UPV7 400 aa12.52□□□□□ -0.41
DDX23-217ENST00000553065 SUPT16HQ9Y5B9 1047 aaKnown RBP12.52□□□□□ -0.41
DDX23-217ENST00000553065 TSPY2A6NKD2 308 aa12.51□□□□□ -0.41
DDX23-217ENST00000553065 COPB2P35606 906 aa12.51□□□□□ -0.41
DDX23-217ENST00000553065 TRIM60Q495X7 471 aa12.51□□□□□ -0.41
DDX23-217ENST00000553065 BTNL9Q6UXG8 535 aa12.51□□□□□ -0.41
DDX23-217ENST00000553065 ZNF467Q7Z7K2 595 aaPredicted RBP12.51□□□□□ -0.41
DDX23-217ENST00000553065 MSL3Q8N5Y2 521 aaKnown RBP12.51□□□□□ -0.41
DDX23-217ENST00000553065 CHST13Q8NET6 341 aa12.51□□□□□ -0.41
DDX23-217ENST00000553065 RILPL2Q969X0 211 aa12.51□□□□□ -0.41
DDX23-217ENST00000553065 DDX11Q96FC9 970 aa12.51□□□□□ -0.41
DDX23-217ENST00000553065 A1CFQ9NQ94 594 aaKnown RBP12.51□□□□□ -0.41
DDX23-217ENST00000553065 XPNPEP3Q9NQH7 507 aa12.51□□□□□ -0.41
DDX23-217ENST00000553065 STX8Q9UNK0 236 aa12.51□□□□□ -0.41
DDX23-217ENST00000553065 A0A0C4DFX4 3053 aa12.51□□□□□ -0.41
DDX23-217ENST00000553065 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.5□□□□□ -0.41
DDX23-217ENST00000553065 TRIM6-TRIM34B2RNG4 842 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 SLC3A2P08195 630 aaKnown RBP12.5□□□□□ -0.41
DDX23-217ENST00000553065 SLC16A2P36021 539 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 SLC1A4P43007 532 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 STAT2P52630 851 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 TLE2Q04725 743 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 ACVR2BQ13705 512 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 Q7L0L9 218 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 TDHQ8IZJ6 230 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 CHURC1Q8WUH1 139 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 UBE2OQ9C0C9 1292 aaKnown RBP12.5□□□□□ -0.41
DDX23-217ENST00000553065 HOMER2Q9NSB8 354 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.5□□□□□ -0.41
DDX23-217ENST00000553065 ATP11BQ9Y2G3 1177 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 CCDC171Q6TFL3 1326 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 SYNGAP1Q96PV0 1343 aa12.5□□□□□ -0.41
DDX23-217ENST00000553065 ZMYM6O95789 1325 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 SYNRGQ9UMZ2 1314 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 MYCNP04198 464 aaPredicted RBP12.49□□□□□ -0.41
DDX23-217ENST00000553065 SNHG28P0DPA3 235 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 RARBP10826 455 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 AKR1A1P14550 325 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 EPHB4P54760 987 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 CCDC144BQ3MJ40 725 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 C9orf50Q5SZB4 431 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 AKNAD1Q5T1N1 836 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 ARMCX2Q7L311 632 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 FAM160B2Q86V87 743 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 ANKRD35Q8N283 1001 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 TRERF1Q96PN7 1200 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 PDLIM7Q9NR12 457 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 PDGFCQ9NRA1 345 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 MTMR7Q9Y216 660 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 CDH23Q9H251 3354 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 MCM3APO60318 1980 aa12.49□□□□□ -0.41
DDX23-217ENST00000553065 NEDD4P46934 1319 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 A0A1W2PQ45 241 aaPredicted RBP12.48□□□□□ -0.41
DDX23-217ENST00000553065 A0A1W2PQY0 241 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 KBTBD13C9JR72 458 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 POTEB2H3BUK9 544 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 DUSP11O75319 330 aaKnown RBP12.48□□□□□ -0.41
DDX23-217ENST00000553065 FDX1P10109 184 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 GSPT1P15170 499 aaKnown RBP12.48□□□□□ -0.41
DDX23-217ENST00000553065 CDK7P50613 346 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 ACLYP53396 1101 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 NKX3-2P78367 333 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 SHHQ15465 462 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 KCNA10Q16322 511 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 RRP12Q5JTH9 1297 aaKnown RBP12.48□□□□□ -0.41
DDX23-217ENST00000553065 TAPT1Q6NXT6 567 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 CCDC174Q6PII3 467 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 CWC27Q6UX04 472 aaKnown RBP12.48□□□□□ -0.41
DDX23-217ENST00000553065 CLEC4DQ8WXI8 215 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 BADQ92934 168 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 ZKSCAN3Q9BRR0 538 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 UPF3AQ9H1J1 476 aaKnown RBP12.48□□□□□ -0.41
DDX23-217ENST00000553065 RANBP17Q9H2T7 1088 aaKnown RBP12.48□□□□□ -0.41
DDX23-217ENST00000553065 CPVLQ9H3G5 476 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 RNF146Q9NTX7 359 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 FAM184BQ9ULE4 1060 aa12.48□□□□□ -0.41
DDX23-217ENST00000553065 FRMPD2Q68DX3 1309 aaPredicted RBP12.47□□□□□ -0.41
DDX23-217ENST00000553065 PDHBP11177 359 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 TOP1P11387 765 aaKnown RBP12.47□□□□□ -0.41
DDX23-217ENST00000553065 ALAS1P13196 640 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 GJA9P57773 515 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 FAAP100Q0VG06 881 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 MORC4Q8TE76 937 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 DCAF4Q8WV16 495 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 ANKS1AQ92625 1134 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 TTC14Q96N46 770 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 TSEN34Q9BSV6 310 aaKnown RBP12.47□□□□□ -0.41
DDX23-217ENST00000553065 ABHD16BQ9H3Z7 469 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 ACAD9Q9H845 621 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 GPCPD1Q9NPB8 672 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 CYP39A1Q9NYL5 469 aa12.47□□□□□ -0.41
DDX23-217ENST00000553065 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms