RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 MYO1BO43795 1136 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 GNA11P29992 359 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 RBM5P52756 815 aaKnown RBP eCLIP11.26□□□□□ -0.61
TMEM116-216ENST00000552800 NR5A1Q13285 461 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 STK38Q15208 465 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 MCTP2Q6DN12 878 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 SMYD5Q6GMV2 418 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 CCAR1Q8IX12 1150 aaKnown RBP11.26□□□□□ -0.61
TMEM116-216ENST00000552800 CCDC82Q8N4S0 544 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 C4orf32Q8N8J7 132 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 MRPS27Q92552 414 aaKnown RBP11.26□□□□□ -0.61
TMEM116-216ENST00000552800 FERMT2Q96AC1 680 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 TEPSINQ96N21 525 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 PPP1R9BQ96SB3 815 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 GLT8D2Q9H1C3 349 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 VPS54Q9P1Q0 977 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 HCSTQ9UBK5 93 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 TMX2Q9Y320 296 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 USP17L5A8MUK1 530 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-216ENST00000552800 LAD1O00515 517 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 PPFIA3O75145 1194 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 ME1P48163 572 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 TNNI2P48788 182 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 ATP2C1P98194 919 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-216ENST00000552800 TNFAIP1Q13829 316 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 MAP3K11Q16584 847 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 ABCB5Q2M3G0 1257 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
TMEM116-216ENST00000552800 WWC2Q6AWC2 1192 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 TYW1BQ6NUM6 668 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 USP17L2Q6R6M4 530 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 KRI1Q8N9T8 703 aaKnown RBP11.25□□□□□ -0.61
TMEM116-216ENST00000552800 BICD2Q8TD16 824 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 RRP36Q96EU6 259 aaKnown RBP11.25□□□□□ -0.61
TMEM116-216ENST00000552800 FTOQ9C0B1 505 aaKnown RBP eCLIP11.25□□□□□ -0.61
TMEM116-216ENST00000552800 RBSNQ9H1K0 784 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 NUP62CLQ9H1M0 184 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 DEFB129Q9H1M3 183 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 TSPY26PQ9H489 355 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 JMJD4Q9H9V9 463 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 CABP5Q9NP86 173 aa11.25□□□□□ -0.61
TMEM116-216ENST00000552800 FBXO2Q9UK22 296 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-216ENST00000552800 TRIM75PA6NK02 468 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 PHF20L1A8MW92 1017 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 EEF2P13639 858 aaKnown RBP11.24□□□□□ -0.61
TMEM116-216ENST00000552800 OSBPP22059 807 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 PRPHP41219 470 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 CLK2P49760 499 aaKnown RBP11.24□□□□□ -0.61
TMEM116-216ENST00000552800 EIF6P56537 245 aaKnown RBP11.24□□□□□ -0.61
TMEM116-216ENST00000552800 NLRP5P59047 1200 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 TCP10Q12799 353 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 RRP1BQ14684 758 aaKnown RBP11.24□□□□□ -0.61
TMEM116-216ENST00000552800 NT5DC1Q5TFE4 455 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 SHC4Q6S5L8 630 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 PDLIM2Q96JY6 352 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 CSRNP1Q96S65 589 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 GOLPH3LQ9H4A5 285 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 ZNF112Q9UJU3 913 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 NOL7Q9UMY1 257 aaKnown RBP11.24□□□□□ -0.61
TMEM116-216ENST00000552800 PCDHA6Q9UN73 950 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 PCDHB6Q9Y5E3 794 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 PCDHA8Q9Y5H6 950 aa11.24□□□□□ -0.61
TMEM116-216ENST00000552800 PSDA5PKW4 1024 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-216ENST00000552800 F5H6K3 240 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 ZBTB5O15062 677 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 ZNF202O95125 648 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 CCDC192P0DO97 292 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 LMNB1P20700 586 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 CAP2P40123 477 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 CACNB3P54284 484 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 MDM2Q00987 491 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-216ENST00000552800 KLRC3Q07444 240 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 TRAF1Q13077 416 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 SEMA3FQ13275 785 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 GNL2Q13823 731 aaKnown RBP11.23□□□□□ -0.61
TMEM116-216ENST00000552800 EARS2Q5JPH6 523 aaKnown RBP11.23□□□□□ -0.61
TMEM116-216ENST00000552800 CCDC73Q6ZRK6 1079 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 KRT25Q7Z3Z0 450 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 GPC2Q8N158 579 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 SPATA20Q8TB22 786 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 EPAS1Q99814 870 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 PYM1Q9BRP8 204 aaKnown RBP11.23□□□□□ -0.61
TMEM116-216ENST00000552800 MAF1Q9H063 256 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 TNMDQ9H2S6 317 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.23□□□□□ -0.61
TMEM116-216ENST00000552800 C6orf50Q9HD87 102 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 USP25Q9UHP3 1055 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 TUBE1Q9UJT0 475 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 PPP2R3BQ9Y5P8 575 aa11.23□□□□□ -0.61
TMEM116-216ENST00000552800 ASNSP08243 561 aa11.22□□□□□ -0.61
TMEM116-216ENST00000552800 NDUFA8P51970 172 aa11.22□□□□□ -0.61
TMEM116-216ENST00000552800 JAG1P78504 1218 aa11.22□□□□□ -0.61
TMEM116-216ENST00000552800 CEBPZQ03701 1054 aaKnown RBP11.22□□□□□ -0.61
TMEM116-216ENST00000552800 SEPT2Q15019 361 aa11.22□□□□□ -0.61
TMEM116-216ENST00000552800 SLC4A8Q2Y0W8 1093 aa11.22□□□□□ -0.61
TMEM116-216ENST00000552800 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
TMEM116-216ENST00000552800 CT47A1Q5JQC4 288 aaPredicted RBP11.22□□□□□ -0.61
TMEM116-216ENST00000552800 SLFN13Q68D06 897 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms