RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 USP26Q9BXU7 913 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 RNF208Q9H0X6 261 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 PPP4R2Q9NY27 417 aa7.1□□□□□ -1.27
SMARCC2-213ENST00000552627 ADCY9O60503 1353 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 ARFGEF1Q9Y6D6 1849 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 TMEM238LA0A1B0GVL6 79 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 NTSR2O95665 410 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 ITPKAP23677 461 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 ST5P78524 1137 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 GRM2Q14416 872 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 ENOX2Q16206 610 aaKnown RBP7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 PRSS36Q5K4E3 855 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 PRPF40BQ6NWY9 871 aaKnown RBP7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 PRR23CQ6ZRP0 262 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 SLC51AQ86UW1 340 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 NLRP10Q86W26 655 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 JARID2Q92833 1246 aaPredicted RBP7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 MYD88Q99836 296 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 MAP3K2Q9Y2U5 619 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 COL4A1P02462 1669 aa7.09□□□□□ -1.27
SMARCC2-213ENST00000552627 TAF1P21675 1872 aa7.09□□□□□ -1.28
SMARCC2-213ENST00000552627 SLX4Q8IY92 1834 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 CACNA1FO60840 1977 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 LOC100289279A0A1B0GTE1 492 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 PI4KAP2A4QPH2 592 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 MEGF11A6BM72 1044 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 F6X3S4 739 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 SART1O43290 800 aaKnown RBP7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 TGFB2P61812 414 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 PTPN12Q05209 780 aaKnown RBP7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 TCIRG1Q13488 830 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 ANKRD34AQ69YU3 496 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 TPTE2Q6XPS3 522 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 TRMT2AQ8IZ69 625 aaKnown RBP7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 PI4KAP1Q8N8J0 262 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 ZNF622Q969S3 477 aaKnown RBP eCLIP7.08□□□□□ -1.281e-8■■□□□ 12.6
SMARCC2-213ENST00000552627 ISCA1Q9BUE6 129 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 BRIP1Q9BX63 1249 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 ZNF576Q9H609 170 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 ABCB6Q9NP58 842 aa7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 GOLGB1Q14789 3259 aaKnown RBP7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 IBTKQ9P2D0 1353 aaPredicted RBP7.08□□□□□ -1.28
SMARCC2-213ENST00000552627 H0YIN7 160 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 B3GALT4O96024 378 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 HCLS1P14317 486 aaPredicted RBP7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 PDE6BP35913 854 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 MAPK8P45983 427 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 CWF19L2Q2TBE0 894 aaKnown RBP7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 UVSSAQ2YD98 709 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 PARP10Q53GL7 1025 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 HSP90AB3PQ58FF7 597 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 DALRD3Q5D0E6 543 aaKnown RBP7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 FDX2Q6P4F2 183 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 PI16Q6UXB8 463 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 KSR2Q6VAB6 950 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 GLIS3Q8NEA6 775 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 SSH1Q8WYL5 1049 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 UTP4Q969X6 686 aaKnown RBP7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 FAM89AQ96GI7 184 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 FAM46AQ96IP4 442 aaKnown RBP7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 METTL22Q9BUU2 404 aaPredicted RBP7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 UTP14AQ9BVJ6 771 aaKnown RBP7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 PIM2Q9P1W9 311 aa7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 TRMT112Q9UI30 125 aaKnown RBP7.07□□□□□ -1.28
SMARCC2-213ENST00000552627 SPEF2Q9C093 1822 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 ZBED9Q6R2W3 1325 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 CHD4Q14839 1912 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 DHX15O43143 795 aaKnown RBP7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 DDX58O95786 925 aaKnown RBP7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 CYP11A1P05108 521 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 IGKV5-2P06315 115 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 SRGNP10124 158 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 FMR1Q06787 632 aaKnown RBP eCLIP7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 RPS26P11Q5JNZ5 115 aaPredicted RBP7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 EXOSC6Q5RKV6 272 aaKnown RBP7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 OLFM4Q6UX06 510 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 DTHD1Q6ZMT9 781 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 PPP1R42Q7Z4L9 355 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 ARMC10Q8N2F6 343 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 YTHDC1Q96MU7 727 aaKnown RBP7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 TMPRSS13Q9BYE2 586 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 BCO2Q9BYV7 579 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 NYXQ9GZU5 481 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 ZFYVE1Q9HBF4 777 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 RAXQ9Y2V3 346 aa7.06□□□□□ -1.28
SMARCC2-213ENST00000552627 UTRNP46939 3433 aa7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 SH3TC1Q8TE82 1336 aa7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 RIC1Q4ADV7 1423 aa7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 DLGAP3O95886 979 aa7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 FCGRTP55899 365 aa7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 POU4F3Q15319 338 aa7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 ARHGAP27Q6ZUM4 889 aa7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 SND1Q7KZF4 910 aaKnown RBP eCLIP7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 TTLL6Q8N841 843 aa7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 C12orf50Q8NA57 414 aaPredicted RBP7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 DNAAF4Q8WXU2 420 aa7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 CHMP4AQ9BY43 222 aa7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 CYP4F12Q9HCS2 524 aa7.05□□□□□ -1.28
SMARCC2-213ENST00000552627 SMC4Q9NTJ3 1288 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms