RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	ROBO2	Q9HCK4	1378 aa		5.25	□□□□□ -1.57
USP44-208	ENST00000552440	PAGE1	O75459	146 aa		5.25	□□□□□ -1.57
USP44-208	ENST00000552440	LEFTY1	O75610	366 aa		5.25	□□□□□ -1.57
USP44-208	ENST00000552440	MCL1	Q07820	350 aa		5.25	□□□□□ -1.57
USP44-208	ENST00000552440	GRAMD1B	Q3KR37	738 aa		5.25	□□□□□ -1.57
USP44-208	ENST00000552440	SEZ6	Q53EL9	994 aa		5.25	□□□□□ -1.57
USP44-208	ENST00000552440	DDX42	Q86XP3	938 aa	Known RBP eCLIP	5.25	□□□□□ -1.57
USP44-208	ENST00000552440	ZNF507	Q8TCN5	953 aa		5.25	□□□□□ -1.57
USP44-208	ENST00000552440	GPBAR1	Q8TDU6	330 aa		5.25	□□□□□ -1.57
USP44-208	ENST00000552440	NEUROD6	Q96NK8	337 aa		5.25	□□□□□ -1.57
USP44-208	ENST00000552440	PPCS	Q9HAB8	311 aa		5.25	□□□□□ -1.57
USP44-208	ENST00000552440	MAPK8IP1	Q9UQF2	711 aa		5.25	□□□□□ -1.57
USP44-208	ENST00000552440	F13A1	P00488	732 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	TRAPPC10	P48553	1259 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	KCTD2	Q14681	263 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	TCEA2	Q15560	299 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	KCNMB1	Q16558	191 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	C2orf27A	Q580R0	203 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	ACBD5	Q5T8D3	534 aa	Predicted RBP	5.24	□□□□□ -1.57
USP44-208	ENST00000552440	KSR2	Q6VAB6	950 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	BNC2	Q6ZN30	1099 aa	Predicted RBP	5.24	□□□□□ -1.57
USP44-208	ENST00000552440	DRC7	Q8IY82	874 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	FBXO27	Q8NI29	283 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	TTC8	Q8TAM2	541 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	E2F7	Q96AV8	911 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	COX4I2	Q96KJ9	171 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	FOXQ1	Q9C009	403 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	PRDM5	Q9NQX1	630 aa	Predicted RBP	5.24	□□□□□ -1.57
USP44-208	ENST00000552440	PLAGL2	Q9UPG8	496 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	PLAA	Q9Y263	795 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	MRPS23	Q9Y3D9	190 aa	Known RBP	5.24	□□□□□ -1.57
USP44-208	ENST00000552440	WASHC2C	Q9Y4E1	1318 aa		5.24	□□□□□ -1.57
USP44-208	ENST00000552440	LRRC10B	A6NIK2	292 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	ITIH2	P19823	946 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	GIPR	P48546	466 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	EIF6	P56537	245 aa	Known RBP	5.23	□□□□□ -1.57
USP44-208	ENST00000552440	ZP2	Q05996	745 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	CCDC84	Q86UT8	332 aa	Predicted RBP	5.23	□□□□□ -1.57
USP44-208	ENST00000552440	CHPF	Q8IZ52	775 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	MYRIP	Q8NFW9	859 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	ENOX1	Q8TC92	643 aa	Known RBP	5.23	□□□□□ -1.57
USP44-208	ENST00000552440	CHAC2	Q8WUX2	184 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	TOX2	Q96NM4	488 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	AS3MT	Q9HBK9	375 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	FAM221A	A4D161	298 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	TLR3	O15455	904 aa	Known RBP	5.23	□□□□□ -1.57
USP44-208	ENST00000552440	RASGRP1	O95267	797 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	MORC3	Q14149	939 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	DDR2	Q16832	855 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	DIEXF	Q68CQ4	756 aa	Known RBP	5.23	□□□□□ -1.57
USP44-208	ENST00000552440	LLGL2	Q6P1M3	1020 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	SLC4A10	Q6U841	1118 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	TEX19	Q8NA77	164 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	GATAD2B	Q8WXI9	593 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	PTPRH	Q9HD43	1115 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	ZNF69	Q9UC07	566 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	KCNG1	Q9UIX4	513 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	MCM8	Q9UJA3	840 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	ADAMTS6	Q9UKP5	1117 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	PCDHB5	Q9Y5E4	795 aa		5.23	□□□□□ -1.57
USP44-208	ENST00000552440	RPGRIP1L	Q68CZ1	1315 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	PDPK1	O15530	556 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	LRIG2	O94898	1065 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
USP44-208	ENST00000552440	MYL3	P08590	195 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	STAT3	P40763	770 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	RAB27A	P51159	221 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	RASGRF1	Q13972	1273 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	MPP2	Q14168	576 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	FBLN7	Q53RD9	439 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	RASIP1	Q5U651	963 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	C22orf34	Q6ZV56	151 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	FAM214B	Q7L5A3	538 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	THNSL2	Q86YJ6	484 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	SYNPO	Q8N3V7	929 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	FBXO41	Q8TF61	875 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	ELMO3	Q96BJ8	720 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	HEXIM2	Q96MH2	286 aa	Known RBP	5.22	□□□□□ -1.57
USP44-208	ENST00000552440	ACTR10	Q9NZ32	417 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	ZIM2	Q9NZV7	527 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	TAGLN3	Q9UI15	199 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	CD2AP	Q9Y5K6	639 aa		5.22	□□□□□ -1.57
USP44-208	ENST00000552440	FAM155A	B1AL88	458 aa	Predicted RBP	5.21	□□□□□ -1.58
USP44-208	ENST00000552440	TCERG1	O14776	1098 aa	Known RBP	5.21	□□□□□ -1.58
USP44-208	ENST00000552440	ASMTL	O95671	621 aa		5.21	□□□□□ -1.58
USP44-208	ENST00000552440	VDR	P11473	427 aa		5.21	□□□□□ -1.58
USP44-208	ENST00000552440	CYP7A1	P22680	504 aa		5.21	□□□□□ -1.58
USP44-208	ENST00000552440	RAP1GAP	P47736	663 aa		5.21	□□□□□ -1.58
USP44-208	ENST00000552440	RING1	Q06587	406 aa		5.21	□□□□□ -1.58
USP44-208	ENST00000552440	SIM2	Q14190	667 aa	Predicted RBP	5.21	□□□□□ -1.58
USP44-208	ENST00000552440	CWF19L2	Q2TBE0	894 aa	Known RBP	5.21	□□□□□ -1.58
USP44-208	ENST00000552440	ZBTB37	Q5TC79	503 aa		5.21	□□□□□ -1.58
USP44-208	ENST00000552440	ZKSCAN2	Q63HK3	967 aa		5.21	□□□□□ -1.58
USP44-208	ENST00000552440	HDX	Q7Z353	690 aa		5.21	□□□□□ -1.58
USP44-208	ENST00000552440	SPACA3	Q8IXA5	215 aa		5.21	□□□□□ -1.58
USP44-208	ENST00000552440	MFSD2A	Q8NA29	543 aa		5.21	□□□□□ -1.58
USP44-208	ENST00000552440	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	5.21	□□□□□ -1.58
USP44-208	ENST00000552440	THAP3	Q8WTV1	239 aa	Predicted RBP	5.21	□□□□□ -1.58
USP44-208	ENST00000552440	FERD3L	Q96RJ6	166 aa		5.21	□□□□□ -1.58
USP44-208	ENST00000552440	CDC5L	Q99459	802 aa	Known RBP	5.21	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 71 ms