RNA–Protein interactions for RNA: ENST00000551800.5

CDK4-209, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-209ENST00000551800 ACVR2BQ13705 512 aa20.26■□□□□ 0.83
CDK4-209ENST00000551800 CCDC96Q2M329 555 aa20.26■□□□□ 0.83
CDK4-209ENST00000551800 FAM109BQ6ICB4 259 aaPredicted RBP20.26■□□□□ 0.83
CDK4-209ENST00000551800 SH3RF1Q7Z6J0 888 aa20.26■□□□□ 0.83
CDK4-209ENST00000551800 ZNF467Q7Z7K2 595 aaPredicted RBP20.26■□□□□ 0.83
CDK4-209ENST00000551800 MKL1Q969V6 931 aa20.26■□□□□ 0.83
CDK4-209ENST00000551800 TRIM43BA6NCK2 446 aa20.25■□□□□ 0.83
CDK4-209ENST00000551800 POTEB2H3BUK9 544 aa20.25■□□□□ 0.83
CDK4-209ENST00000551800 TLR3O15455 904 aaKnown RBP20.25■□□□□ 0.83
CDK4-209ENST00000551800 ADAMTS4O75173 837 aa20.25■□□□□ 0.83
CDK4-209ENST00000551800 DUSP11O75319 330 aaKnown RBP20.25■□□□□ 0.83
CDK4-209ENST00000551800 C9orf50Q5SZB4 431 aa20.25■□□□□ 0.83
CDK4-209ENST00000551800 ARMCX2Q7L311 632 aa20.25■□□□□ 0.83
CDK4-209ENST00000551800 PI4K2BQ8TCG2 481 aa20.25■□□□□ 0.83
CDK4-209ENST00000551800 TRIM43Q96BQ3 446 aaPredicted RBP20.25■□□□□ 0.83
CDK4-209ENST00000551800 RNF146Q9NTX7 359 aa20.25■□□□□ 0.83
CDK4-209ENST00000551800 RANBP6O60518 1105 aaKnown RBP20.24■□□□□ 0.83
CDK4-209ENST00000551800 ALAS1P13196 640 aa20.24■□□□□ 0.83
CDK4-209ENST00000551800 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
CDK4-209ENST00000551800 KCNA10Q16322 511 aa20.24■□□□□ 0.83
CDK4-209ENST00000551800 ZMYM1Q5SVZ6 1142 aa20.24■□□□□ 0.83
CDK4-209ENST00000551800 CCDC174Q6PII3 467 aa20.24■□□□□ 0.83
CDK4-209ENST00000551800 MAMDC4Q6UXC1 1216 aa20.24■□□□□ 0.83
CDK4-209ENST00000551800 PCDHB15Q9Y5E8 787 aa20.24■□□□□ 0.83
CDK4-209ENST00000551800 SNAI1O95863 264 aaPredicted RBP20.23■□□□□ 0.83
CDK4-209ENST00000551800 CTDSPL2Q05D32 466 aa20.23■□□□□ 0.83
CDK4-209ENST00000551800 CCDC144BQ3MJ40 725 aa20.23■□□□□ 0.83
CDK4-209ENST00000551800 DNAJC25-GNG10A0A024R161 153 aa20.22■□□□□ 0.83
CDK4-209ENST00000551800 A0A0U1RQG5 324 aaPredicted RBP20.22■□□□□ 0.83
CDK4-209ENST00000551800 ASB14A6NK59 587 aa20.22■□□□□ 0.83
CDK4-209ENST00000551800 MCCP23508 829 aa20.22■□□□□ 0.83
CDK4-209ENST00000551800 SMAD3P84022 425 aaKnown RBP20.22■□□□□ 0.83
CDK4-209ENST00000551800 TKFCQ3LXA3 575 aa20.22■□□□□ 0.83
CDK4-209ENST00000551800 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
CDK4-209ENST00000551800 CCDC129Q6ZRS4 1044 aa20.22■□□□□ 0.83
CDK4-209ENST00000551800 KCTD1Q719H9 257 aa20.22■□□□□ 0.83
CDK4-209ENST00000551800 CCDC144CPQ8IYA2 1237 aa20.22■□□□□ 0.83
CDK4-209ENST00000551800 OTUD7AQ8TE49 926 aaPredicted RBP20.22■□□□□ 0.83
CDK4-209ENST00000551800 STAG1Q8WVM7 1258 aa20.22■□□□□ 0.83
CDK4-209ENST00000551800 GMCL1Q96IK5 515 aa20.22■□□□□ 0.83
CDK4-209ENST00000551800 GUCD1Q96NT3 240 aa20.22■□□□□ 0.83
CDK4-209ENST00000551800 KIAA0355O15063 1070 aa20.21■□□□□ 0.83
CDK4-209ENST00000551800 ASGR1P07306 291 aa20.21■□□□□ 0.83
CDK4-209ENST00000551800 RRP12Q5JTH9 1297 aaKnown RBP20.21■□□□□ 0.83
CDK4-209ENST00000551800 GNASQ5JWF2 1037 aa20.21■□□□□ 0.83
CDK4-209ENST00000551800 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.21■□□□□ 0.83
CDK4-209ENST00000551800 EVI5LQ96CN4 794 aa20.21■□□□□ 0.83
CDK4-209ENST00000551800 TOX2Q96NM4 488 aa20.21■□□□□ 0.83
CDK4-209ENST00000551800 TRERF1Q96PN7 1200 aa20.21■□□□□ 0.83
CDK4-209ENST00000551800 LAMA2P24043 3122 aaKnown RBP20.2■□□□□ 0.82
CDK4-209ENST00000551800 FOSL2P15408 326 aa20.2■□□□□ 0.82
CDK4-209ENST00000551800 CST5P28325 142 aaPredicted RBP20.2■□□□□ 0.82
CDK4-209ENST00000551800 NSMFQ6X4W1 530 aa20.2■□□□□ 0.82
CDK4-209ENST00000551800 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.2■□□□□ 0.82
CDK4-209ENST00000551800 AGBL1Q96MI9 1066 aa20.2■□□□□ 0.82
CDK4-209ENST00000551800 AP5M1Q9H0R1 490 aa20.2■□□□□ 0.82
CDK4-209ENST00000551800 CCPG1Q9ULG6 757 aa20.2■□□□□ 0.82
CDK4-209ENST00000551800 ELP1O95163 1332 aa20.2■□□□□ 0.82
CDK4-209ENST00000551800 MYADML2A6NDP7 307 aa20.19■□□□□ 0.82
CDK4-209ENST00000551800 ZEB2O60315 1214 aa20.19■□□□□ 0.82
CDK4-209ENST00000551800 CNTN2Q02246 1040 aa20.19■□□□□ 0.82
CDK4-209ENST00000551800 TNFAIP2Q03169 654 aa20.19■□□□□ 0.82
CDK4-209ENST00000551800 PPIGQ13427 754 aaKnown RBP eCLIP20.19■□□□□ 0.82
CDK4-209ENST00000551800 ANKRD33Q7Z3H0 272 aa20.19■□□□□ 0.82
CDK4-209ENST00000551800 A1CFQ9NQ94 594 aaKnown RBP20.19■□□□□ 0.82
CDK4-209ENST00000551800 KIAA1217Q5T5P2 1943 aa20.19■□□□□ 0.82
CDK4-209ENST00000551800 TANC1Q9C0D5 1861 aa20.18■□□□□ 0.82
CDK4-209ENST00000551800 TRIM6-TRIM34B2RNG4 842 aa20.18■□□□□ 0.82
CDK4-209ENST00000551800 GJA9P57773 515 aa20.18■□□□□ 0.82
CDK4-209ENST00000551800 FAAP100Q0VG06 881 aa20.18■□□□□ 0.82
CDK4-209ENST00000551800 RCSD1Q6JBY9 416 aa20.18■□□□□ 0.82
CDK4-209ENST00000551800 TLK2Q86UE8 772 aa20.18■□□□□ 0.82
CDK4-209ENST00000551800 TMEM199Q8N511 208 aa20.18■□□□□ 0.82
CDK4-209ENST00000551800 KLHDC9Q8NEP7 349 aa20.18■□□□□ 0.82
CDK4-209ENST00000551800 MAFAQ8NHW3 353 aaPredicted RBP20.18■□□□□ 0.82
CDK4-209ENST00000551800 DCAF4Q8WV16 495 aa20.18■□□□□ 0.82
CDK4-209ENST00000551800 CDX2Q99626 313 aaPredicted RBP20.18■□□□□ 0.82
CDK4-209ENST00000551800 TIMP1P01033 207 aa20.17■□□□□ 0.82
CDK4-209ENST00000551800 MYLIPQ8WY64 445 aa20.17■□□□□ 0.82
CDK4-209ENST00000551800 CRBNQ96SW2 442 aa20.17■□□□□ 0.82
CDK4-209ENST00000551800 MPHOSPH6Q99547 160 aaKnown RBP20.17■□□□□ 0.82
CDK4-209ENST00000551800 PPP1R12CQ9BZL4 782 aa20.17■□□□□ 0.82
CDK4-209ENST00000551800 UPF3AQ9H1J1 476 aaKnown RBP20.17■□□□□ 0.82
CDK4-209ENST00000551800 HELLSQ9NRZ9 838 aa20.17■□□□□ 0.82
CDK4-209ENST00000551800 PRR12Q9ULL5 1215 aa20.17■□□□□ 0.82
CDK4-209ENST00000551800 MYO9BQ13459 2157 aa20.17■□□□□ 0.82
CDK4-209ENST00000551800 MYH7BA7E2Y1 1941 aa20.16■□□□□ 0.82
CDK4-209ENST00000551800 TMEM265A0A087WTH1 108 aa20.16■□□□□ 0.82
CDK4-209ENST00000551800 NMT2O60551 498 aa20.16■□□□□ 0.82
CDK4-209ENST00000551800 ITGB8P26012 769 aa20.16■□□□□ 0.82
CDK4-209ENST00000551800 SNAP25P60880 206 aa20.16■□□□□ 0.82
CDK4-209ENST00000551800 BEX3Q00994 111 aa20.16■□□□□ 0.82
CDK4-209ENST00000551800 EEPD1Q7L9B9 569 aa20.16■□□□□ 0.82
CDK4-209ENST00000551800 MTIF3Q9H2K0 278 aaKnown RBP20.16■□□□□ 0.82
CDK4-209ENST00000551800 SEMA6BQ9H3T3 888 aa20.16■□□□□ 0.82
CDK4-209ENST00000551800 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.16■□□□□ 0.82
CDK4-209ENST00000551800 ARVCFO00192 962 aa20.15■□□□□ 0.82
CDK4-209ENST00000551800 PLA2G6O60733 806 aa20.15■□□□□ 0.82
CDK4-209ENST00000551800 MFAP1P55081 439 aaKnown RBP20.15■□□□□ 0.82
CDK4-209ENST00000551800 MFSD5Q6N075 450 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms