RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 IRX5P78411 483 aaPredicted RBP18.4■□□□□ 0.54
CACNB3-220ENST00000551716 TNFAIP2Q03169 654 aa18.4■□□□□ 0.54
CACNB3-220ENST00000551716 CXCL17Q6UXB2 119 aa18.4■□□□□ 0.54
CACNB3-220ENST00000551716 ARMCX2Q7L311 632 aa18.4■□□□□ 0.54
CACNB3-220ENST00000551716 CHST13Q8NET6 341 aa18.4■□□□□ 0.54
CACNB3-220ENST00000551716 AP5M1Q9H0R1 490 aa18.4■□□□□ 0.54
CACNB3-220ENST00000551716 RIPK3Q9Y572 518 aa18.4■□□□□ 0.54
CACNB3-220ENST00000551716 TCF20Q9UGU0 1960 aaKnown RBP18.4■□□□□ 0.54
CACNB3-220ENST00000551716 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.54
CACNB3-220ENST00000551716 PI4K2BG5E9Z4 385 aa18.39■□□□□ 0.53
CACNB3-220ENST00000551716 ADCY6O43306 1168 aa18.39■□□□□ 0.53
CACNB3-220ENST00000551716 C16orf86Q6ZW13 317 aa18.39■□□□□ 0.53
CACNB3-220ENST00000551716 AACSQ86V21 672 aa18.39■□□□□ 0.53
CACNB3-220ENST00000551716 LCORLQ8N3X6 602 aa18.39■□□□□ 0.53
CACNB3-220ENST00000551716 PHOSPHO2Q8TCD6 241 aa18.39■□□□□ 0.53
CACNB3-220ENST00000551716 FRAT1Q92837 279 aaPredicted RBP18.39■□□□□ 0.53
CACNB3-220ENST00000551716 CHD7Q9P2D1 2997 aa18.39■□□□□ 0.53
CACNB3-220ENST00000551716 KIF28PB7ZC32 967 aa18.38■□□□□ 0.53
CACNB3-220ENST00000551716 SUPT20HL2P0C7V6 817 aa18.38■□□□□ 0.53
CACNB3-220ENST00000551716 ACTN1P12814 892 aa18.38■□□□□ 0.53
CACNB3-220ENST00000551716 SLC4A3P48751 1232 aa18.38■□□□□ 0.53
CACNB3-220ENST00000551716 BEX3Q00994 111 aa18.38■□□□□ 0.53
CACNB3-220ENST00000551716 FSCN1Q16658 493 aaKnown RBP18.38■□□□□ 0.53
CACNB3-220ENST00000551716 CCDC144CPQ8IYA2 1237 aa18.38■□□□□ 0.53
CACNB3-220ENST00000551716 CPXCR1Q8N123 301 aa18.38■□□□□ 0.53
CACNB3-220ENST00000551716 CLUAP1Q96AJ1 413 aa18.38■□□□□ 0.53
CACNB3-220ENST00000551716 TCRBV5S4A2TA0A5A2 114 aa18.37■□□□□ 0.53
CACNB3-220ENST00000551716 USP17L12C9JPN9 530 aa18.37■□□□□ 0.53
CACNB3-220ENST00000551716 USP17L21D6R901 530 aa18.37■□□□□ 0.53
CACNB3-220ENST00000551716 CA3P07451 260 aa18.37■□□□□ 0.53
CACNB3-220ENST00000551716 OAZ1P54368 228 aa18.37■□□□□ 0.53
CACNB3-220ENST00000551716 ALYREFQ86V81 257 aaKnown RBP18.37■□□□□ 0.53
CACNB3-220ENST00000551716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.37■□□□□ 0.53
CACNB3-220ENST00000551716 TRPV6Q9H1D0 765 aa18.37■□□□□ 0.53
CACNB3-220ENST00000551716 WNT8AQ9H1J5 351 aa18.37■□□□□ 0.53
CACNB3-220ENST00000551716 ARMT1Q9H993 441 aa18.37■□□□□ 0.53
CACNB3-220ENST00000551716 Q9Y3F1 56 aa18.37■□□□□ 0.53
CACNB3-220ENST00000551716 UMODL1Q5DID0 1318 aa18.37■□□□□ 0.53
CACNB3-220ENST00000551716 MUC6Q6W4X9 2439 aa18.37■□□□□ 0.53
CACNB3-220ENST00000551716 ASB14A6NK59 587 aa18.36■□□□□ 0.53
CACNB3-220ENST00000551716 F5H6K3 240 aa18.36■□□□□ 0.53
CACNB3-220ENST00000551716 SMIM22K7EJ46 135 aa18.36■□□□□ 0.53
CACNB3-220ENST00000551716 RFXAPO00287 272 aa18.36■□□□□ 0.53
CACNB3-220ENST00000551716 B4GALT4O60513 344 aa18.36■□□□□ 0.53
CACNB3-220ENST00000551716 KLRC3Q07444 240 aa18.36■□□□□ 0.53
CACNB3-220ENST00000551716 IQSEC1Q6DN90 963 aa18.36■□□□□ 0.53
CACNB3-220ENST00000551716 AGBL1Q96MI9 1066 aa18.36■□□□□ 0.53
CACNB3-220ENST00000551716 SLC9A7Q96T83 725 aa18.36■□□□□ 0.53
CACNB3-220ENST00000551716 KATNBL1Q9H079 304 aa18.36■□□□□ 0.53
CACNB3-220ENST00000551716 GNEQ9Y223 722 aaKnown RBP18.36■□□□□ 0.53
CACNB3-220ENST00000551716 ZNF316A6NFI3 1004 aaPredicted RBP18.35■□□□□ 0.53
CACNB3-220ENST00000551716 FDX1P10109 184 aa18.35■□□□□ 0.53
CACNB3-220ENST00000551716 RFC2P35250 354 aa18.35■□□□□ 0.53
CACNB3-220ENST00000551716 HSP90AB4PQ58FF6 505 aa18.35■□□□□ 0.53
CACNB3-220ENST00000551716 TLK2Q86UE8 772 aa18.35■□□□□ 0.53
CACNB3-220ENST00000551716 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
CACNB3-220ENST00000551716 SLC38A10Q9HBR0 1119 aa18.35■□□□□ 0.53
CACNB3-220ENST00000551716 C11orf16Q9NQ32 467 aa18.35■□□□□ 0.53
CACNB3-220ENST00000551716 LMCD1Q9NZU5 365 aa18.35■□□□□ 0.53
CACNB3-220ENST00000551716 NYAP2Q9P242 653 aa18.35■□□□□ 0.53
CACNB3-220ENST00000551716 FEM1BQ9UK73 627 aa18.35■□□□□ 0.53
CACNB3-220ENST00000551716 PRRC2BQ5JSZ5 2229 aaKnown RBP18.35■□□□□ 0.53
CACNB3-220ENST00000551716 GRIN2DO15399 1336 aa18.34■□□□□ 0.53
CACNB3-220ENST00000551716 PRR33A8MZF0 331 aa18.34■□□□□ 0.53
CACNB3-220ENST00000551716 GOLIM4O00461 696 aa18.34■□□□□ 0.53
CACNB3-220ENST00000551716 DYNC1LI2O43237 492 aaPredicted RBP18.34■□□□□ 0.53
CACNB3-220ENST00000551716 PRKAB2O43741 272 aa18.34■□□□□ 0.53
CACNB3-220ENST00000551716 TTLL4Q14679 1199 aa18.34■□□□□ 0.53
CACNB3-220ENST00000551716 ARNTL2Q8WYA1 636 aa18.34■□□□□ 0.53
CACNB3-220ENST00000551716 SCLYQ96I15 445 aa18.34■□□□□ 0.53
CACNB3-220ENST00000551716 FGD4Q96M96 766 aa18.34■□□□□ 0.53
CACNB3-220ENST00000551716 NUP88Q99567 741 aaPredicted RBP18.34■□□□□ 0.53
CACNB3-220ENST00000551716 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.34■□□□□ 0.53
CACNB3-220ENST00000551716 CERS4Q9HA82 394 aa18.34■□□□□ 0.53
CACNB3-220ENST00000551716 RAVER2Q9HCJ3 691 aaKnown RBP18.34■□□□□ 0.53
CACNB3-220ENST00000551716 NAV1Q8NEY1 1877 aa18.33■□□□□ 0.53
CACNB3-220ENST00000551716 MBD4O95243 580 aa18.33■□□□□ 0.52
CACNB3-220ENST00000551716 ZKSCAN2Q63HK3 967 aa18.33■□□□□ 0.52
CACNB3-220ENST00000551716 KIFC2Q96AC6 838 aa18.33■□□□□ 0.52
CACNB3-220ENST00000551716 ALDH8A1Q9H2A2 487 aaPredicted RBP18.33■□□□□ 0.52
CACNB3-220ENST00000551716 ASTN1O14525 1302 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 CYP2D7A0A087X1C5 515 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.32■□□□□ 0.52
CACNB3-220ENST00000551716 FAM86C2PA6NEL3 165 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 NDUFB10O96000 172 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 TAP1Q03518 808 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 FAM133AQ8N9E0 248 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 VWCEQ96DN2 955 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 DNAJC2Q99543 621 aaKnown RBP18.32■□□□□ 0.52
CACNB3-220ENST00000551716 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.52
CACNB3-220ENST00000551716 ACAD9Q9H845 621 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 SYNPO2Q9UMS6 1093 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 TNNQ9UQP3 1299 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 COL11A1P12107 1806 aaPredicted RBP18.32■□□□□ 0.52
CACNB3-220ENST00000551716 PARP14Q460N5 1801 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 TRANK1O15050 2925 aa18.32■□□□□ 0.52
CACNB3-220ENST00000551716 ALADP13716 330 aa18.31■□□□□ 0.52
CACNB3-220ENST00000551716 ADD2P35612 726 aa18.31■□□□□ 0.52
CACNB3-220ENST00000551716 DEFB128Q7Z7B8 93 aa18.31■□□□□ 0.52
CACNB3-220ENST00000551716 CLASRPQ8N2M8 674 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms