RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 ALX1Q15699 326 aa23.63■■□□□ 1.37
NPAS3-210ENST00000551492 CFAP100Q494V2 611 aa23.63■■□□□ 1.37
NPAS3-210ENST00000551492 RTKN2Q8IZC4 609 aa23.63■■□□□ 1.37
NPAS3-210ENST00000551492 TACO1Q9BSH4 297 aaKnown RBP23.63■■□□□ 1.37
NPAS3-210ENST00000551492 NUP62CLQ9H1M0 184 aa23.63■■□□□ 1.37
NPAS3-210ENST00000551492 CAPN7Q9Y6W3 813 aa23.63■■□□□ 1.37
NPAS3-210ENST00000551492 LDHCP07864 332 aa23.63■■□□□ 1.37
NPAS3-210ENST00000551492 CCT5P48643 541 aa23.63■■□□□ 1.37
NPAS3-210ENST00000551492 TFAP4Q01664 338 aa23.63■■□□□ 1.37
NPAS3-210ENST00000551492 STRIP1Q5VSL9 837 aa23.63■■□□□ 1.37
NPAS3-210ENST00000551492 TSPY2A6NKD2 308 aa23.62■■□□□ 1.37
NPAS3-210ENST00000551492 ENO4A6NNW6 628 aa23.62■■□□□ 1.37
NPAS3-210ENST00000551492 NEMFO60524 1076 aa23.62■■□□□ 1.37
NPAS3-210ENST00000551492 NAP1L1P55209 391 aaKnown RBP23.62■■□□□ 1.37
NPAS3-210ENST00000551492 GSTO1P78417 241 aa23.62■■□□□ 1.37
NPAS3-210ENST00000551492 SAMD7Q7Z3H4 446 aa23.62■■□□□ 1.37
NPAS3-210ENST00000551492 IQCA1Q86XH1 822 aa23.62■■□□□ 1.37
NPAS3-210ENST00000551492 NIM1KQ8IY84 436 aa23.62■■□□□ 1.37
NPAS3-210ENST00000551492 CABS1Q96KC9 395 aa23.62■■□□□ 1.37
NPAS3-210ENST00000551492 LY9Q9HBG7 655 aa23.62■■□□□ 1.37
NPAS3-210ENST00000551492 TNKSO95271 1327 aa23.62■■□□□ 1.37
NPAS3-210ENST00000551492 ZSCAN22P10073 491 aaPredicted RBP23.62■■□□□ 1.37
NPAS3-210ENST00000551492 CDC37L1Q7L3B6 337 aa23.62■■□□□ 1.37
NPAS3-210ENST00000551492 INTS4Q96HW7 963 aaKnown RBP23.62■■□□□ 1.37
NPAS3-210ENST00000551492 DDTLA6NHG4 134 aaPredicted RBP23.61■■□□□ 1.37
NPAS3-210ENST00000551492 TRAF1Q13077 416 aa23.61■■□□□ 1.37
NPAS3-210ENST00000551492 LARP1BQ659C4 914 aaKnown RBP23.61■■□□□ 1.37
NPAS3-210ENST00000551492 FAM177A1Q8N128 213 aaPredicted RBP23.61■■□□□ 1.37
NPAS3-210ENST00000551492 ANGEL1Q9UNK9 670 aaKnown RBP23.61■■□□□ 1.37
NPAS3-210ENST00000551492 ZNF232Q9UNY5 417 aa23.61■■□□□ 1.37
NPAS3-210ENST00000551492 SNED1Q8TER0 1413 aa23.61■■□□□ 1.37
NPAS3-210ENST00000551492 SH2B2O14492 632 aaPredicted RBP23.61■■□□□ 1.37
NPAS3-210ENST00000551492 PREPLQ4J6C6 727 aaPredicted RBP23.61■■□□□ 1.37
NPAS3-210ENST00000551492 C12orf60Q5U649 245 aa23.61■■□□□ 1.37
NPAS3-210ENST00000551492 FAM204AQ9H8W3 233 aa23.61■■□□□ 1.37
NPAS3-210ENST00000551492 STX8Q9UNK0 236 aa23.61■■□□□ 1.37
NPAS3-210ENST00000551492 ENAHQ8N8S7 591 aaPredicted RBP23.6■■□□□ 1.37
NPAS3-210ENST00000551492 UBAC1Q9BSL1 405 aa23.6■■□□□ 1.37
NPAS3-210ENST00000551492 CEBPZQ03701 1054 aaKnown RBP23.6■■□□□ 1.37
NPAS3-210ENST00000551492 JDP2Q8WYK2 163 aa23.6■■□□□ 1.37
NPAS3-210ENST00000551492 CCDC102AQ96A19 550 aa23.6■■□□□ 1.37
NPAS3-210ENST00000551492 SYT17Q9BSW7 474 aa23.6■■□□□ 1.37
NPAS3-210ENST00000551492 ATP8A2Q9NTI2 1148 aa23.6■■□□□ 1.37
NPAS3-210ENST00000551492 PTPDC1A2A3K4 754 aa23.6■■□□□ 1.37
NPAS3-210ENST00000551492 SNUPNO95149 360 aaKnown RBP23.6■■□□□ 1.37
NPAS3-210ENST00000551492 GPR161Q8N6U8 529 aaKnown RBP23.6■■□□□ 1.37
NPAS3-210ENST00000551492 ZSWIM4Q9H7M6 989 aa23.6■■□□□ 1.37
NPAS3-210ENST00000551492 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.6■■□□□ 1.37
NPAS3-210ENST00000551492 PDS5AQ29RF7 1337 aaKnown RBP23.6■■□□□ 1.37
NPAS3-210ENST00000551492 HMGB1P09429 215 aaKnown RBP23.59■■□□□ 1.37
NPAS3-210ENST00000551492 APOA5Q6Q788 366 aa23.59■■□□□ 1.37
NPAS3-210ENST00000551492 MIGA2Q7L4E1 593 aa23.59■■□□□ 1.37
NPAS3-210ENST00000551492 TNMDQ9H2S6 317 aa23.59■■□□□ 1.37
NPAS3-210ENST00000551492 KDM4CQ9H3R0 1056 aa23.59■■□□□ 1.37
NPAS3-210ENST00000551492 INPP5BP32019 993 aa23.58■■□□□ 1.37
NPAS3-210ENST00000551492 ETF1P62495 437 aaKnown RBP23.58■■□□□ 1.37
NPAS3-210ENST00000551492 WTAPQ15007 396 aa23.58■■□□□ 1.37
NPAS3-210ENST00000551492 TBC1D10BQ4KMP7 808 aaPredicted RBP23.58■■□□□ 1.37
NPAS3-210ENST00000551492 IL17RBQ9NRM6 502 aa23.58■■□□□ 1.37
NPAS3-210ENST00000551492 GOLGA8HP0CJ92 632 aa23.58■■□□□ 1.36
NPAS3-210ENST00000551492 ANKRD1Q15327 319 aa23.58■■□□□ 1.36
NPAS3-210ENST00000551492 C3orf20Q8ND61 904 aa23.58■■□□□ 1.36
NPAS3-210ENST00000551492 NSUN7Q8NE18 718 aaKnown RBP23.58■■□□□ 1.36
NPAS3-210ENST00000551492 VEGFAP15692 232 aaPredicted RBP23.57■■□□□ 1.36
NPAS3-210ENST00000551492 YBX3P16989 372 aaKnown RBP eCLIP23.57■■□□□ 1.36
NPAS3-210ENST00000551492 CDC25BP30305 580 aa23.57■■□□□ 1.36
NPAS3-210ENST00000551492 GUCY1A2P33402 732 aa23.57■■□□□ 1.36
NPAS3-210ENST00000551492 PPP4CP60510 307 aa23.57■■□□□ 1.36
NPAS3-210ENST00000551492 NAA25Q14CX7 972 aa23.57■■□□□ 1.36
NPAS3-210ENST00000551492 TFIP11Q9UBB9 837 aaKnown RBP23.57■■□□□ 1.36
NPAS3-210ENST00000551492 ZNRF3Q9ULT6 936 aa23.57■■□□□ 1.36
NPAS3-210ENST00000551492 A0A087WWV3 80 aa23.57■■□□□ 1.36
NPAS3-210ENST00000551492 CDK8P49336 464 aa23.57■■□□□ 1.36
NPAS3-210ENST00000551492 MYSM1Q5VVJ2 828 aa23.57■■□□□ 1.36
NPAS3-210ENST00000551492 CCDC84Q86UT8 332 aaPredicted RBP23.57■■□□□ 1.36
NPAS3-210ENST00000551492 ZSCAN31Q96LW9 406 aaPredicted RBP23.57■■□□□ 1.36
NPAS3-210ENST00000551492 FTOQ9C0B1 505 aaKnown RBP eCLIP23.57■■□□□ 1.36
NPAS3-210ENST00000551492 SLC12A7Q9Y666 1083 aa23.57■■□□□ 1.36
NPAS3-210ENST00000551492 GAKO14976 1311 aa23.56■■□□□ 1.36
NPAS3-210ENST00000551492 CPLX1O14810 134 aa23.56■■□□□ 1.36
NPAS3-210ENST00000551492 STX6O43752 255 aa23.56■■□□□ 1.36
NPAS3-210ENST00000551492 FDPSP14324 419 aaKnown RBP23.56■■□□□ 1.36
NPAS3-210ENST00000551492 USP4Q13107 963 aa23.56■■□□□ 1.36
NPAS3-210ENST00000551492 SH3BP5LQ7L8J4 393 aa23.56■■□□□ 1.36
NPAS3-210ENST00000551492 ESR2Q92731 530 aa23.56■■□□□ 1.36
NPAS3-210ENST00000551492 DACT1Q9NYF0 836 aa23.56■■□□□ 1.36
NPAS3-210ENST00000551492 FAM198AQ9UFP1 575 aa23.56■■□□□ 1.36
NPAS3-210ENST00000551492 CHUKO15111 745 aa23.56■■□□□ 1.36
NPAS3-210ENST00000551492 F13A1P00488 732 aa23.56■■□□□ 1.36
NPAS3-210ENST00000551492 METAP2P50579 478 aaKnown RBP eCLIP23.56■■□□□ 1.36
NPAS3-210ENST00000551492 RSBN1LQ6PCB5 846 aaPredicted RBP23.56■■□□□ 1.36
NPAS3-210ENST00000551492 SH2B1Q9NRF2 756 aaPredicted RBP23.56■■□□□ 1.36
NPAS3-210ENST00000551492 PFKFB2O60825 505 aa23.55■■□□□ 1.36
NPAS3-210ENST00000551492 RBBP5Q15291 538 aaKnown RBP23.55■■□□□ 1.36
NPAS3-210ENST00000551492 CD2APQ9Y5K6 639 aa23.55■■□□□ 1.36
NPAS3-210ENST00000551492 MAFGO15525 162 aa23.55■■□□□ 1.36
NPAS3-210ENST00000551492 MRPL12P52815 198 aaKnown RBP23.55■■□□□ 1.36
NPAS3-210ENST00000551492 ZSCAN10Q96SZ4 725 aaPredicted RBP23.55■■□□□ 1.36
NPAS3-210ENST00000551492 KRT23Q9C075 422 aa23.55■■□□□ 1.36
NPAS3-210ENST00000551492 FAM217BQ9NTX9 383 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms