RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 TOMM22Q9NS69 142 aa15.39■□□□□ 0.05
NPAS3-209ENST00000551008 MTMR7Q9Y216 660 aa15.39■□□□□ 0.05
NPAS3-209ENST00000551008 NR2E3Q9Y5X4 410 aa15.39■□□□□ 0.05
NPAS3-209ENST00000551008 DNM1LO00429 736 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 ADCY6O43306 1168 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 SNHG28P0DPA3 235 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 PDHBP11177 359 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 PCP11498 1178 aaKnown RBP15.38■□□□□ 0.05
NPAS3-209ENST00000551008 SLC16A2P36021 539 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 SLC4A3P48751 1232 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 MFAP1P55081 439 aaKnown RBP15.38■□□□□ 0.05
NPAS3-209ENST00000551008 GJC2Q5T442 439 aaPredicted RBP15.38■□□□□ 0.05
NPAS3-209ENST00000551008 MAMDC4Q6UXC1 1216 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 MFSD6Q6ZSS7 791 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 DCAF4Q8WV16 495 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 ZKSCAN3Q9BRR0 538 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 KATNBL1Q9H079 304 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 SLC5A4Q9NY91 659 aa15.38■□□□□ 0.05
NPAS3-209ENST00000551008 ZMYND8Q9ULU4 1186 aaPredicted RBP15.38■□□□□ 0.05
NPAS3-209ENST00000551008 HIP1O00291 1037 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 FDX1P10109 184 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 CHMLP26374 656 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 CNTN2Q02246 1040 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 MUM1L1Q5H9M0 696 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 PPP4R3BQ5MIZ7 849 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 FAM133AQ8N9E0 248 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 CHST13Q8NET6 341 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 CHURC1Q8WUH1 139 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 GDF15Q99988 308 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 RANBP17Q9H2T7 1088 aaKnown RBP15.37■□□□□ 0.05
NPAS3-209ENST00000551008 A1CFQ9NQ94 594 aaKnown RBP15.37■□□□□ 0.05
NPAS3-209ENST00000551008 HOMER2Q9NSB8 354 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 RNF146Q9NTX7 359 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 NRBP1Q9UHY1 535 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 TAF6LQ9Y6J9 622 aa15.37■□□□□ 0.05
NPAS3-209ENST00000551008 DDX49Q9Y6V7 483 aaKnown RBP15.37■□□□□ 0.05
NPAS3-209ENST00000551008 FRMPD2Q68DX3 1309 aaPredicted RBP15.37■□□□□ 0.05
NPAS3-209ENST00000551008 B4E1Z4 1266 aa15.36■□□□□ 0.05
NPAS3-209ENST00000551008 SYN1P17600 705 aa15.36■□□□□ 0.05
NPAS3-209ENST00000551008 PTH1RQ03431 593 aa15.36■□□□□ 0.05
NPAS3-209ENST00000551008 LRRC41Q15345 812 aa15.36■□□□□ 0.05
NPAS3-209ENST00000551008 CCDC96Q2M329 555 aa15.36■□□□□ 0.05
NPAS3-209ENST00000551008 CCDC174Q6PII3 467 aa15.36■□□□□ 0.05
NPAS3-209ENST00000551008 ZNF467Q7Z7K2 595 aaPredicted RBP15.36■□□□□ 0.05
NPAS3-209ENST00000551008 SKAP1Q86WV1 359 aa15.36■□□□□ 0.05
NPAS3-209ENST00000551008 ISY1Q9ULR0 285 aaKnown RBP15.36■□□□□ 0.05
NPAS3-209ENST00000551008 SYNGAP1Q96PV0 1343 aa15.36■□□□□ 0.05
NPAS3-209ENST00000551008 SOWAHBA6NEL2 793 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 ZNF213O14771 459 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 KDM4AO75164 1064 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 IRX5P78411 483 aaPredicted RBP15.35■□□□□ 0.05
NPAS3-209ENST00000551008 ZNF543Q08ER8 600 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 IKQ13123 557 aaPredicted RBP15.35■□□□□ 0.05
NPAS3-209ENST00000551008 SYDE2Q5VT97 1194 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 MSL3Q8N5Y2 521 aaKnown RBP15.35■□□□□ 0.05
NPAS3-209ENST00000551008 DDX11Q96FC9 970 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 TTC14Q96N46 770 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 SENP6Q9GZR1 1112 aaPredicted RBP15.35■□□□□ 0.05
NPAS3-209ENST00000551008 RNF41Q9H4P4 317 aaPredicted RBP15.35■□□□□ 0.05
NPAS3-209ENST00000551008 ACAD9Q9H845 621 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 GPCPD1Q9NPB8 672 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 ZSWIM5Q9P217 1185 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 FBXO40Q9UH90 709 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 RAD50Q92878 1312 aa15.35■□□□□ 0.05
NPAS3-209ENST00000551008 BAZ2BQ9UIF8 2168 aaKnown RBP15.34■□□□□ 0.05
NPAS3-209ENST00000551008 ADAMTS4O75173 837 aa15.34■□□□□ 0.05
NPAS3-209ENST00000551008 PGK1P00558 417 aa15.34■□□□□ 0.05
NPAS3-209ENST00000551008 ALAS1P13196 640 aa15.34■□□□□ 0.05
NPAS3-209ENST00000551008 ENAHQ8N8S7 591 aaPredicted RBP15.34■□□□□ 0.05
NPAS3-209ENST00000551008 ANKS1AQ92625 1134 aa15.34■□□□□ 0.05
NPAS3-209ENST00000551008 ESR2Q92731 530 aa15.34■□□□□ 0.05
NPAS3-209ENST00000551008 TRERF1Q96PN7 1200 aa15.34■□□□□ 0.05
NPAS3-209ENST00000551008 PURBQ96QR8 312 aaKnown RBP15.34■□□□□ 0.05
NPAS3-209ENST00000551008 CPVLQ9H3G5 476 aa15.34■□□□□ 0.05
NPAS3-209ENST00000551008 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.34■□□□□ 0.05
NPAS3-209ENST00000551008 MYADML2A6NDP7 307 aa15.33■□□□□ 0.04
NPAS3-209ENST00000551008 ICAM1P05362 532 aa15.33■□□□□ 0.04
NPAS3-209ENST00000551008 ATN1P54259 1190 aaPredicted RBP15.33■□□□□ 0.04
NPAS3-209ENST00000551008 SNX17Q15036 470 aa15.33■□□□□ 0.04
NPAS3-209ENST00000551008 TKFCQ3LXA3 575 aa15.33■□□□□ 0.04
NPAS3-209ENST00000551008 CYB5R4Q7L1T6 521 aa15.33■□□□□ 0.04
NPAS3-209ENST00000551008 ARMCX2Q7L311 632 aa15.33■□□□□ 0.04
NPAS3-209ENST00000551008 ANKRD35Q8N283 1001 aa15.33■□□□□ 0.04
NPAS3-209ENST00000551008 CLEC4DQ8WXI8 215 aa15.33■□□□□ 0.04
NPAS3-209ENST00000551008 XPNPEP3Q9NQH7 507 aa15.33■□□□□ 0.04
NPAS3-209ENST00000551008 CYP39A1Q9NYL5 469 aa15.33■□□□□ 0.04
NPAS3-209ENST00000551008 CTDP1Q9Y5B0 961 aaPredicted RBP15.33■□□□□ 0.04
NPAS3-209ENST00000551008 SYNRGQ9UMZ2 1314 aa15.33■□□□□ 0.04
NPAS3-209ENST00000551008 NFIBO00712 420 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 CTAGE5O15320 804 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 SGSM2O43147 1006 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 CYP21A2P08686 494 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 GOLGA8HP0CJ92 632 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 AKR1A1P14550 325 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 PTGS1P23219 599 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 ADCYAP1R1P41586 468 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 MAGEA10P43363 369 aaPredicted RBP15.32■□□□□ 0.04
NPAS3-209ENST00000551008 RTP1P59025 263 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 SEC23AQ15436 765 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 CCSAPQ6IQ19 270 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms