RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 TMEM39AQ9NV64 488 aa24.54■■□□□ 1.52
CACNB3-218ENST00000550771 MYH4Q9Y623 1939 aa24.54■■□□□ 1.52
CACNB3-218ENST00000550771 DCDC2CA8MYV0 355 aa24.53■■□□□ 1.52
CACNB3-218ENST00000550771 TMEM232C9JQI7 657 aa24.53■■□□□ 1.52
CACNB3-218ENST00000550771 PLA2G6O60733 806 aa24.53■■□□□ 1.52
CACNB3-218ENST00000550771 FAAP100Q0VG06 881 aa24.53■■□□□ 1.52
CACNB3-218ENST00000550771 ARMCX2Q7L311 632 aa24.53■■□□□ 1.52
CACNB3-218ENST00000550771 PCSK9Q8NBP7 692 aaKnown RBP24.53■■□□□ 1.52
CACNB3-218ENST00000550771 STAG1Q8WVM7 1258 aa24.53■■□□□ 1.52
CACNB3-218ENST00000550771 SPC25Q9HBM1 224 aa24.53■■□□□ 1.52
CACNB3-218ENST00000550771 ELP1O95163 1332 aa24.53■■□□□ 1.52
CACNB3-218ENST00000550771 SLC1A4P43007 532 aa24.52■■□□□ 1.52
CACNB3-218ENST00000550771 CCDC144BQ3MJ40 725 aa24.52■■□□□ 1.52
CACNB3-218ENST00000550771 GLT1D1Q96MS3 346 aa24.52■■□□□ 1.52
CACNB3-218ENST00000550771 UPF3AQ9H1J1 476 aaKnown RBP24.52■■□□□ 1.52
CACNB3-218ENST00000550771 SEMA6BQ9H3T3 888 aa24.52■■□□□ 1.52
CACNB3-218ENST00000550771 ACAD9Q9H845 621 aa24.52■■□□□ 1.52
CACNB3-218ENST00000550771 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.52■■□□□ 1.52
CACNB3-218ENST00000550771 MYADML2A6NDP7 307 aa24.51■■□□□ 1.51
CACNB3-218ENST00000550771 GJA9P57773 515 aa24.51■■□□□ 1.51
CACNB3-218ENST00000550771 TKFCQ3LXA3 575 aa24.51■■□□□ 1.51
CACNB3-218ENST00000550771 CCDC144CPQ8IYA2 1237 aa24.51■■□□□ 1.51
CACNB3-218ENST00000550771 FAM133AQ8N9E0 248 aa24.51■■□□□ 1.51
CACNB3-218ENST00000550771 HOMER2Q9NSB8 354 aa24.51■■□□□ 1.51
CACNB3-218ENST00000550771 ZNF536O15090 1300 aa24.51■■□□□ 1.51
CACNB3-218ENST00000550771 MROH7Q68CQ1 1323 aa24.51■■□□□ 1.51
CACNB3-218ENST00000550771 SALL3Q9BXA9 1300 aa24.51■■□□□ 1.51
CACNB3-218ENST00000550771 FOXP2O15409 715 aa24.5■■□□□ 1.51
CACNB3-218ENST00000550771 ADCY6O43306 1168 aa24.5■■□□□ 1.51
CACNB3-218ENST00000550771 C6orf222P0C671 652 aaPredicted RBP24.5■■□□□ 1.51
CACNB3-218ENST00000550771 EPHB4P54760 987 aa24.5■■□□□ 1.51
CACNB3-218ENST00000550771 NKX3-2P78367 333 aa24.5■■□□□ 1.51
CACNB3-218ENST00000550771 FPGSQ05932 587 aa24.5■■□□□ 1.51
CACNB3-218ENST00000550771 RNPC3Q96LT9 517 aaKnown RBP24.5■■□□□ 1.51
CACNB3-218ENST00000550771 CDX2Q99626 313 aaPredicted RBP24.5■■□□□ 1.51
CACNB3-218ENST00000550771 KATNBL1Q9H079 304 aa24.5■■□□□ 1.51
CACNB3-218ENST00000550771 ISY1Q9ULR0 285 aaKnown RBP24.5■■□□□ 1.51
CACNB3-218ENST00000550771 STX8Q9UNK0 236 aa24.5■■□□□ 1.51
CACNB3-218ENST00000550771 TSPY2A6NKD2 308 aa24.49■■□□□ 1.51
CACNB3-218ENST00000550771 ASGR1P07306 291 aa24.49■■□□□ 1.51
CACNB3-218ENST00000550771 MCCP23508 829 aa24.49■■□□□ 1.51
CACNB3-218ENST00000550771 IKQ13123 557 aaPredicted RBP24.49■■□□□ 1.51
CACNB3-218ENST00000550771 A1CFQ9NQ94 594 aaKnown RBP24.49■■□□□ 1.51
CACNB3-218ENST00000550771 IL17RBQ9NRM6 502 aa24.49■■□□□ 1.51
CACNB3-218ENST00000550771 RNF146Q9NTX7 359 aa24.49■■□□□ 1.51
CACNB3-218ENST00000550771 ANAPC4Q9UJX5 808 aa24.49■■□□□ 1.51
CACNB3-218ENST00000550771 TBX21Q9UL17 535 aa24.49■■□□□ 1.51
CACNB3-218ENST00000550771 TMEM265A0A087WTH1 108 aa24.48■■□□□ 1.51
CACNB3-218ENST00000550771 TIMP1P01033 207 aa24.48■■□□□ 1.51
CACNB3-218ENST00000550771 CDK7P50613 346 aa24.48■■□□□ 1.51
CACNB3-218ENST00000550771 CNTN2Q02246 1040 aa24.48■■□□□ 1.51
CACNB3-218ENST00000550771 RCSD1Q6JBY9 416 aa24.48■■□□□ 1.51
CACNB3-218ENST00000550771 CCDC129Q6ZRS4 1044 aa24.48■■□□□ 1.51
CACNB3-218ENST00000550771 EVI5LQ96CN4 794 aa24.48■■□□□ 1.51
CACNB3-218ENST00000550771 AGBL1Q96MI9 1066 aa24.48■■□□□ 1.51
CACNB3-218ENST00000550771 ZBTB47Q9UFB7 747 aaPredicted RBP24.48■■□□□ 1.51
CACNB3-218ENST00000550771 NOVP48745 357 aa24.47■■□□□ 1.51
CACNB3-218ENST00000550771 IRX5P78411 483 aaPredicted RBP24.47■■□□□ 1.51
CACNB3-218ENST00000550771 GNASQ5JWF2 1037 aa24.47■■□□□ 1.51
CACNB3-218ENST00000550771 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.47■■□□□ 1.51
CACNB3-218ENST00000550771 TRERF1Q96PN7 1200 aa24.47■■□□□ 1.51
CACNB3-218ENST00000550771 TTYH1Q9H313 450 aaPredicted RBP24.47■■□□□ 1.51
CACNB3-218ENST00000550771 LAMA2P24043 3122 aaKnown RBP24.47■■□□□ 1.51
CACNB3-218ENST00000550771 A0A0U1RQG5 324 aaPredicted RBP24.46■■□□□ 1.51
CACNB3-218ENST00000550771 ASB14A6NK59 587 aa24.46■■□□□ 1.51
CACNB3-218ENST00000550771 CTDSPL2Q05D32 466 aa24.46■■□□□ 1.51
CACNB3-218ENST00000550771 KCTD1Q719H9 257 aa24.46■■□□□ 1.51
CACNB3-218ENST00000550771 A0A0C4DFX4 3053 aa24.46■■□□□ 1.51
CACNB3-218ENST00000550771 SOWAHBA6NEL2 793 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 ARVCFO00192 962 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 CTAGE5O15320 804 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 ORC4O43929 436 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 NMT2O60551 498 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 FGRP09769 529 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 ALX1Q15699 326 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 ANKRD45Q5TZF3 282 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 MFSD5Q6N075 450 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 TICAM2Q86XR7 235 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 VTI1AQ96AJ9 217 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 INCENPQ9NQS7 918 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 HELLSQ9NRZ9 838 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 PRR12Q9ULL5 1215 aa24.45■■□□□ 1.5
CACNB3-218ENST00000550771 RANBP6O60518 1105 aaKnown RBP24.44■■□□□ 1.5
CACNB3-218ENST00000550771 ALAS1P13196 640 aa24.44■■□□□ 1.5
CACNB3-218ENST00000550771 RRP1P56182 461 aaKnown RBP24.44■■□□□ 1.5
CACNB3-218ENST00000550771 TNFAIP2Q03169 654 aa24.44■■□□□ 1.5
CACNB3-218ENST00000550771 VPS53Q5VIR6 699 aa24.44■■□□□ 1.5
CACNB3-218ENST00000550771 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.43■■□□□ 1.5
CACNB3-218ENST00000550771 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.43■■□□□ 1.5
CACNB3-218ENST00000550771 CCDC174Q6PII3 467 aa24.43■■□□□ 1.5
CACNB3-218ENST00000550771 FAM126BQ8IXS8 530 aa24.43■■□□□ 1.5
CACNB3-218ENST00000550771 DCAF4Q8WV16 495 aa24.43■■□□□ 1.5
CACNB3-218ENST00000550771 CHMP4CQ96CF2 233 aa24.43■■□□□ 1.5
CACNB3-218ENST00000550771 GNEQ9Y223 722 aaKnown RBP24.43■■□□□ 1.5
CACNB3-218ENST00000550771 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.42■■□□□ 1.5
CACNB3-218ENST00000550771 PDE1AP54750 535 aa24.42■■□□□ 1.5
CACNB3-218ENST00000550771 PPIGQ13427 754 aaKnown RBP eCLIP24.42■■□□□ 1.5
CACNB3-218ENST00000550771 NOL8Q76FK4 1167 aaKnown RBP24.42■■□□□ 1.5
CACNB3-218ENST00000550771 MAFAQ8NHW3 353 aaPredicted RBP24.42■■□□□ 1.5
CACNB3-218ENST00000550771 CYP39A1Q9NYL5 469 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms