RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 ELP1O95163 1332 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 CCND2P30279 289 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 ECE1P42892 770 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 MFSD14CQ5VZR4 134 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 RETREG2Q8NC44 543 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 RPS6KC1Q96S38 1066 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 DDX25Q9UHL0 483 aaKnown RBP13.56□□□□□ -0.24
NR4A1-215ENST00000550557 KDM3AQ9Y4C1 1321 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 A0A1B0GVL5 298 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 GJC1P36383 396 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 NECTIN1Q15223 517 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 NOX5Q96PH1 765 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 ZBED2Q9BTP6 218 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 AKT3Q9Y243 479 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 SUGT1Q9Y2Z0 365 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 CEMIPQ8WUJ3 1361 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 PRPF6O94906 941 aaKnown RBP13.56□□□□□ -0.24
NR4A1-215ENST00000550557 RAPGEF1Q13905 1077 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 ZNF589Q86UQ0 364 aaPredicted RBP13.56□□□□□ -0.24
NR4A1-215ENST00000550557 KCNH3Q9ULD8 1083 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 MROH7-TTC4A0A0A0MT08 1334 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 LRRIQ4A6NIV6 560 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 H0YCG3 227 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 M0R2C6 588 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
NR4A1-215ENST00000550557 USP17L2Q6R6M4 530 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 SLC7A3Q8WY07 619 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 OSBP2Q969R2 916 aa13.56□□□□□ -0.24
NR4A1-215ENST00000550557 PFKFB2O60825 505 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 RPS12P25398 132 aaKnown RBP13.55□□□□□ -0.24
NR4A1-215ENST00000550557 TFDP1Q14186 410 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
NR4A1-215ENST00000550557 RSBN1LQ6PCB5 846 aaPredicted RBP13.55□□□□□ -0.24
NR4A1-215ENST00000550557 FAM84BQ96KN1 310 aaPredicted RBP13.55□□□□□ -0.24
NR4A1-215ENST00000550557 PSMD1Q99460 953 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 SSX2IPQ9Y2D8 614 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 VEGFAP15692 232 aaPredicted RBP13.55□□□□□ -0.24
NR4A1-215ENST00000550557 CYLC1P35663 651 aaPredicted RBP13.55□□□□□ -0.24
NR4A1-215ENST00000550557 SLF1Q9BQI6 1058 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 GOLGA6L9A6NEM1 432 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 CUTAO60888 179 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 GYS1P13807 737 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 SNX16P57768 344 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 SEPT2Q15019 361 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 LRCH2Q5VUJ6 765 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 FMNL3Q8IVF7 1028 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 LARSQ9P2J5 1176 aaKnown RBP13.55□□□□□ -0.24
NR4A1-215ENST00000550557 KCNH4Q9UQ05 1017 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 ZNF577Q9BSK1 485 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 CBX8Q9HC52 389 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 FER1L4A9Z1Z3 1794 aa13.55□□□□□ -0.24
NR4A1-215ENST00000550557 ZMYM6O95789 1325 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 CD19P15391 556 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 ZSCAN20P17040 1043 aaPredicted RBP13.54□□□□□ -0.24
NR4A1-215ENST00000550557 TNNI1P19237 187 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 EIF2AK2P19525 551 aaKnown RBP13.54□□□□□ -0.24
NR4A1-215ENST00000550557 LIG4P49917 911 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 RNF207Q6ZRF8 634 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 CRACR2AQ9BSW2 395 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 HERC5Q9UII4 1024 aaKnown RBP13.54□□□□□ -0.24
NR4A1-215ENST00000550557 RABGAP1Q9Y3P9 1069 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 ANKRD26Q9UPS8 1709 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 PSMD14O00487 310 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 POLR2DO15514 142 aaKnown RBP13.54□□□□□ -0.24
NR4A1-215ENST00000550557 SLU7O95391 586 aaKnown RBP13.54□□□□□ -0.24
NR4A1-215ENST00000550557 ZNF75DP51815 510 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 SCARF1Q14162 830 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 SPECC1Q5M775 1068 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 PIGSQ96S52 555 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 SEPT9Q9UHD8 586 aaPredicted RBP13.54□□□□□ -0.24
NR4A1-215ENST00000550557 NUB1Q9Y5A7 615 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 KIFAP3Q92845 792 aa13.54□□□□□ -0.24
NR4A1-215ENST00000550557 P4HA1P13674 534 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 TECP42680 631 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 CDC37Q16543 378 aaPredicted RBP13.53□□□□□ -0.24
NR4A1-215ENST00000550557 FAM83BQ5T0W9 1011 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 SNRNP48Q6IEG0 339 aaKnown RBP13.53□□□□□ -0.24
NR4A1-215ENST00000550557 MIS18BP1Q6P0N0 1132 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 ZFYVE28Q9HCC9 887 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 CYP21A2P08686 494 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 CYP4A11Q02928 519 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 RNASELQ05823 741 aaKnown RBP13.53□□□□□ -0.24
NR4A1-215ENST00000550557 OGFRQ9NZT2 677 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 CALCOCO1Q9P1Z2 691 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 OR52Z1P0C646 297 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 NT5C2P49902 561 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.53□□□□□ -0.24
NR4A1-215ENST00000550557 APOL6Q9BWW8 343 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 MYL3P08590 195 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 UBXN1Q04323 297 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 NELFCDQ8IXH7 590 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 CCDC102AQ96A19 550 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 MAPK8IP1Q9UQF2 711 aa13.53□□□□□ -0.24
NR4A1-215ENST00000550557 CSPG5O95196 566 aa13.52□□□□□ -0.24
NR4A1-215ENST00000550557 TUBB4AP04350 444 aa13.52□□□□□ -0.24
NR4A1-215ENST00000550557 SNAPC2Q13487 334 aa13.52□□□□□ -0.24
NR4A1-215ENST00000550557 GPBP1Q86WP2 473 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms