RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 SMCO2A6NFE2 343 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 EGFRP00533 1210 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 STAT2P52630 851 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 MLLT1Q03111 559 aaPredicted RBP14.36□□□□□ -0.11
CACNB3-217ENST00000550483 NONOQ15233 471 aaKnown RBP eCLIP14.36□□□□□ -0.11
CACNB3-217ENST00000550483 MAP3K11Q16584 847 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 SYDE2Q5VT97 1194 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 ARL6IP4Q66PJ3 421 aaKnown RBP14.36□□□□□ -0.11
CACNB3-217ENST00000550483 REXO1Q8N1G1 1221 aaKnown RBP14.36□□□□□ -0.11
CACNB3-217ENST00000550483 ZC3H15Q8WU90 426 aaKnown RBP14.36□□□□□ -0.11
CACNB3-217ENST00000550483 SHISA4Q96DD7 197 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 TIGD1Q96MW7 591 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 FTOQ9C0B1 505 aaKnown RBP eCLIP14.36□□□□□ -0.11
CACNB3-217ENST00000550483 UBA5Q9GZZ9 404 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 DACT1Q9NYF0 836 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 FAM13BQ9NYF5 915 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 GGA3Q9NZ52 723 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 FEM1BQ9UK73 627 aa14.36□□□□□ -0.11
CACNB3-217ENST00000550483 SRPRBQ9Y5M8 271 aaKnown RBP14.36□□□□□ -0.11
CACNB3-217ENST00000550483 WDR46O15213 610 aaKnown RBP14.35□□□□□ -0.11
CACNB3-217ENST00000550483 CAVIN2O95810 425 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 FDX1P10109 184 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 PTPREP23469 700 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 TOB1P50616 345 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-217ENST00000550483 RRP1BQ14684 758 aaKnown RBP14.35□□□□□ -0.11
CACNB3-217ENST00000550483 EAPPQ56P03 285 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-217ENST00000550483 AXDND1Q5T1B0 1012 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-217ENST00000550483 RBM43Q6ZSC3 357 aaKnown RBP14.35□□□□□ -0.11
CACNB3-217ENST00000550483 PIK3AP1Q6ZUJ8 805 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 USP50Q70EL3 339 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-217ENST00000550483 KCTD1Q719H9 257 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 MIGA2Q7L4E1 593 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 ELOA2Q8IYF1 753 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-217ENST00000550483 SCYL3Q8IZE3 742 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 FSIP1Q8NA03 581 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 TRPM4Q8TD43 1214 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 PIBF1Q8WXW3 757 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 CUL5Q93034 780 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 DCPSQ96C86 337 aaKnown RBP14.35□□□□□ -0.11
CACNB3-217ENST00000550483 WDR18Q9BV38 432 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 KIAA1683Q9H0B3 1180 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 TAF1DQ9H5J8 278 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-217ENST00000550483 VAT1LQ9HCJ6 419 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 RIC8AQ9NPQ8 531 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 PCDHA6Q9UN73 950 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 PCDHA8Q9Y5H6 950 aa14.35□□□□□ -0.11
CACNB3-217ENST00000550483 A0A1W2PRG0 241 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 SYCE3A1L190 88 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 IQCA1LA6NCM1 817 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 RAD21O60216 631 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 LIG1P18858 919 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 EPS15P42566 896 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 IKQ13123 557 aaPredicted RBP14.34□□□□□ -0.11
CACNB3-217ENST00000550483 AP3B2Q13367 1082 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 CDC37Q16543 378 aaPredicted RBP14.34□□□□□ -0.11
CACNB3-217ENST00000550483 NOL9Q5SY16 702 aaKnown RBP14.34□□□□□ -0.11
CACNB3-217ENST00000550483 LDHDQ86WU2 507 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 FEZ1Q99689 392 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 TSPY26PQ9H489 355 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 PICK1Q9NRD5 415 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 PCDH10Q9P2E7 1040 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 HOOK1Q9UJC3 728 aaKnown RBP14.34□□□□□ -0.11
CACNB3-217ENST00000550483 CLEC11AQ9Y240 323 aa14.34□□□□□ -0.11
CACNB3-217ENST00000550483 USP17L10C9JJH3 530 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 TMEM232C9JQI7 657 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 CCDC192P0DO97 292 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 PRPHP41219 470 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 JAG1P78504 1218 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 ATP2C1P98194 919 aaPredicted RBP14.33□□□□□ -0.12
CACNB3-217ENST00000550483 QRICH1Q2TAL8 776 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 DEFB115Q30KQ5 88 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 RESP18Q5W5W9 173 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 TTBK2Q6IQ55 1244 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 TYW1BQ6NUM6 668 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 FBXO11Q86XK2 927 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 SULF1Q8IWU6 871 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 FMR1NBQ8N0W7 255 aaPredicted RBP14.33□□□□□ -0.12
CACNB3-217ENST00000550483 ENGASEQ8NFI3 743 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 USP25Q9UHP3 1055 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 PCDHB6Q9Y5E3 794 aa14.33□□□□□ -0.12
CACNB3-217ENST00000550483 C19orf81C9J6K1 198 aa14.32□□□□□ -0.12
CACNB3-217ENST00000550483 NR1I2O75469 434 aa14.32□□□□□ -0.12
CACNB3-217ENST00000550483 FOSP01100 380 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-217ENST00000550483 SLURP2P0DP57 97 aa14.32□□□□□ -0.12
CACNB3-217ENST00000550483 GCFC2P16383 781 aaKnown RBP14.32□□□□□ -0.12
CACNB3-217ENST00000550483 NF2P35240 595 aa14.32□□□□□ -0.12
CACNB3-217ENST00000550483 DEKP35659 375 aaKnown RBP14.32□□□□□ -0.12
CACNB3-217ENST00000550483 NBPF12Q5TAG4 269 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-217ENST00000550483 MAP1SQ66K74 1059 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-217ENST00000550483 RASGRP2Q7LDG7 609 aa14.32□□□□□ -0.12
CACNB3-217ENST00000550483 NEK8Q86SG6 692 aa14.32□□□□□ -0.12
CACNB3-217ENST00000550483 CDAN1Q8IWY9 1227 aa14.32□□□□□ -0.12
CACNB3-217ENST00000550483 SAMD3Q8N6K7 520 aa14.32□□□□□ -0.12
CACNB3-217ENST00000550483 PSTPIP2Q9H939 334 aa14.32□□□□□ -0.12
CACNB3-217ENST00000550483 FBXO2Q9UK22 296 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-217ENST00000550483 HPSEQ9Y251 543 aa14.32□□□□□ -0.12
CACNB3-217ENST00000550483 PCDHA1Q9Y5I3 950 aa14.32□□□□□ -0.12
CACNB3-217ENST00000550483 PDE4DIPQ5VU43 2346 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms