RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 KLHDC9Q8NEP7 349 aa27.39■■□□□ 1.98
SMARCD1-209ENST00000550477 RNPC3Q96LT9 517 aaKnown RBP27.39■■□□□ 1.98
SMARCD1-209ENST00000550477 ACAD9Q9H845 621 aa27.39■■□□□ 1.98
SMARCD1-209ENST00000550477 ELP1O95163 1332 aa27.39■■□□□ 1.97
SMARCD1-209ENST00000550477 COL6A3P12111 3177 aa27.38■■□□□ 1.97
SMARCD1-209ENST00000550477 PLIN4Q96Q06 1357 aa27.38■■□□□ 1.97
SMARCD1-209ENST00000550477 CCDC174Q6PII3 467 aa27.38■■□□□ 1.97
SMARCD1-209ENST00000550477 STAG1Q8WVM7 1258 aa27.38■■□□□ 1.97
SMARCD1-209ENST00000550477 SEMA6BQ9H3T3 888 aa27.38■■□□□ 1.97
SMARCD1-209ENST00000550477 TSPY2A6NKD2 308 aa27.37■■□□□ 1.97
SMARCD1-209ENST00000550477 MX1P20591 662 aa27.37■■□□□ 1.97
SMARCD1-209ENST00000550477 CST5P28325 142 aaPredicted RBP27.37■■□□□ 1.97
SMARCD1-209ENST00000550477 TKFCQ3LXA3 575 aa27.37■■□□□ 1.97
SMARCD1-209ENST00000550477 ZMYM1Q5SVZ6 1142 aa27.37■■□□□ 1.97
SMARCD1-209ENST00000550477 ARMCX2Q7L311 632 aa27.37■■□□□ 1.97
SMARCD1-209ENST00000550477 LENG1Q96BZ8 264 aaPredicted RBP27.37■■□□□ 1.97
SMARCD1-209ENST00000550477 HOMER2Q9NSB8 354 aa27.37■■□□□ 1.97
SMARCD1-209ENST00000550477 ASB14A6NK59 587 aa27.36■■□□□ 1.97
SMARCD1-209ENST00000550477 CCDC144BQ3MJ40 725 aa27.36■■□□□ 1.97
SMARCD1-209ENST00000550477 PI4K2BQ8TCG2 481 aa27.36■■□□□ 1.97
SMARCD1-209ENST00000550477 GMCL1Q96IK5 515 aa27.36■■□□□ 1.97
SMARCD1-209ENST00000550477 SEC62Q99442 399 aaKnown RBP27.36■■□□□ 1.97
SMARCD1-209ENST00000550477 STX8Q9UNK0 236 aa27.36■■□□□ 1.97
SMARCD1-209ENST00000550477 FAAP100Q0VG06 881 aa27.35■■□□□ 1.97
SMARCD1-209ENST00000550477 GNASQ5JWF2 1037 aa27.35■■□□□ 1.97
SMARCD1-209ENST00000550477 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.35■■□□□ 1.97
SMARCD1-209ENST00000550477 CDX2Q99626 313 aaPredicted RBP27.35■■□□□ 1.97
SMARCD1-209ENST00000550477 TMEM265A0A087WTH1 108 aa27.34■■□□□ 1.97
SMARCD1-209ENST00000550477 TLR3O15455 904 aaKnown RBP27.34■■□□□ 1.97
SMARCD1-209ENST00000550477 ASGR1P07306 291 aa27.34■■□□□ 1.97
SMARCD1-209ENST00000550477 MCCP23508 829 aa27.34■■□□□ 1.97
SMARCD1-209ENST00000550477 GJA9P57773 515 aa27.34■■□□□ 1.97
SMARCD1-209ENST00000550477 NOL8Q76FK4 1167 aaKnown RBP27.34■■□□□ 1.97
SMARCD1-209ENST00000550477 A0A0U1RQG5 324 aaPredicted RBP27.33■■□□□ 1.97
SMARCD1-209ENST00000550477 PLA2G6O60733 806 aa27.33■■□□□ 1.97
SMARCD1-209ENST00000550477 TIMP1P01033 207 aa27.33■■□□□ 1.97
SMARCD1-209ENST00000550477 ITGB8P26012 769 aa27.33■■□□□ 1.97
SMARCD1-209ENST00000550477 CCSAPQ6IQ19 270 aaPredicted RBP27.33■■□□□ 1.97
SMARCD1-209ENST00000550477 RCSD1Q6JBY9 416 aa27.33■■□□□ 1.97
SMARCD1-209ENST00000550477 CCDC144CPQ8IYA2 1237 aa27.33■■□□□ 1.97
SMARCD1-209ENST00000550477 RNF146Q9NTX7 359 aa27.33■■□□□ 1.97
SMARCD1-209ENST00000550477 PCDHB15Q9Y5E8 787 aa27.33■■□□□ 1.97
SMARCD1-209ENST00000550477 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.32■■□□□ 1.96
SMARCD1-209ENST00000550477 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.32■■□□□ 1.96
SMARCD1-209ENST00000550477 TRERF1Q96PN7 1200 aa27.32■■□□□ 1.96
SMARCD1-209ENST00000550477 UPF3AQ9H1J1 476 aaKnown RBP27.32■■□□□ 1.96
SMARCD1-209ENST00000550477 ALAS1P13196 640 aa27.31■■□□□ 1.96
SMARCD1-209ENST00000550477 TNFAIP2Q03169 654 aa27.31■■□□□ 1.96
SMARCD1-209ENST00000550477 PPIGQ13427 754 aaKnown RBP eCLIP27.31■■□□□ 1.96
SMARCD1-209ENST00000550477 EVI5LQ96CN4 794 aa27.31■■□□□ 1.96
SMARCD1-209ENST00000550477 MCM3APO60318 1980 aa27.3■■□□□ 1.96
SMARCD1-209ENST00000550477 ARVCFO00192 962 aa27.3■■□□□ 1.96
SMARCD1-209ENST00000550477 ZEB2O60315 1214 aa27.3■■□□□ 1.96
SMARCD1-209ENST00000550477 RANBP6O60518 1105 aaKnown RBP27.3■■□□□ 1.96
SMARCD1-209ENST00000550477 TMEM199Q8N511 208 aa27.3■■□□□ 1.96
SMARCD1-209ENST00000550477 FAM133AQ8N9E0 248 aa27.3■■□□□ 1.96
SMARCD1-209ENST00000550477 AGBL1Q96MI9 1066 aa27.3■■□□□ 1.96
SMARCD1-209ENST00000550477 AP5M1Q9H0R1 490 aa27.3■■□□□ 1.96
SMARCD1-209ENST00000550477 MYADML2A6NDP7 307 aa27.29■■□□□ 1.96
SMARCD1-209ENST00000550477 CABYRO75952 493 aa27.29■■□□□ 1.96
SMARCD1-209ENST00000550477 CNTN2Q02246 1040 aa27.29■■□□□ 1.96
SMARCD1-209ENST00000550477 ANKRD45Q5TZF3 282 aa27.29■■□□□ 1.96
SMARCD1-209ENST00000550477 MFSD5Q6N075 450 aa27.29■■□□□ 1.96
SMARCD1-209ENST00000550477 CCDC129Q6ZRS4 1044 aa27.29■■□□□ 1.96
SMARCD1-209ENST00000550477 MAFAQ8NHW3 353 aaPredicted RBP27.29■■□□□ 1.96
SMARCD1-209ENST00000550477 SEZ6LQ9BYH1 1024 aa27.29■■□□□ 1.96
SMARCD1-209ENST00000550477 A1CFQ9NQ94 594 aaKnown RBP27.29■■□□□ 1.96
SMARCD1-209ENST00000550477 CDK7P50613 346 aa27.28■■□□□ 1.96
SMARCD1-209ENST00000550477 CTDSPL2Q05D32 466 aa27.28■■□□□ 1.96
SMARCD1-209ENST00000550477 KCTD1Q719H9 257 aa27.28■■□□□ 1.96
SMARCD1-209ENST00000550477 OTUD7AQ8TE49 926 aaPredicted RBP27.28■■□□□ 1.96
SMARCD1-209ENST00000550477 CHMP4CQ96CF2 233 aa27.28■■□□□ 1.96
SMARCD1-209ENST00000550477 FGD4Q96M96 766 aa27.28■■□□□ 1.96
SMARCD1-209ENST00000550477 HELLSQ9NRZ9 838 aa27.28■■□□□ 1.96
SMARCD1-209ENST00000550477 TOMM22Q9NS69 142 aa27.28■■□□□ 1.96
SMARCD1-209ENST00000550477 FOSL2P15408 326 aa27.27■■□□□ 1.96
SMARCD1-209ENST00000550477 EPHB4P54760 987 aa27.27■■□□□ 1.96
SMARCD1-209ENST00000550477 ANAPC4Q9UJX5 808 aa27.27■■□□□ 1.96
SMARCD1-209ENST00000550477 TBX21Q9UL17 535 aa27.27■■□□□ 1.96
SMARCD1-209ENST00000550477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.27■■□□□ 1.96
SMARCD1-209ENST00000550477 ZNF536O15090 1300 aa27.26■■□□□ 1.95
SMARCD1-209ENST00000550477 NKX3-2P78367 333 aa27.26■■□□□ 1.95
SMARCD1-209ENST00000550477 CCDC96Q2M329 555 aa27.26■■□□□ 1.95
SMARCD1-209ENST00000550477 TICAM2Q86XR7 235 aa27.26■■□□□ 1.95
SMARCD1-209ENST00000550477 DCAF4Q8WV16 495 aa27.26■■□□□ 1.95
SMARCD1-209ENST00000550477 TTYH1Q9H313 450 aaPredicted RBP27.26■■□□□ 1.95
SMARCD1-209ENST00000550477 CCPG1Q9ULG6 757 aa27.26■■□□□ 1.95
SMARCD1-209ENST00000550477 PRR12Q9ULL5 1215 aa27.26■■□□□ 1.95
SMARCD1-209ENST00000550477 MTMR7Q9Y216 660 aa27.26■■□□□ 1.95
SMARCD1-209ENST00000550477 IQSEC1Q6DN90 963 aa27.25■■□□□ 1.95
SMARCD1-209ENST00000550477 MYLIPQ8WY64 445 aa27.25■■□□□ 1.95
SMARCD1-209ENST00000550477 IL17RBQ9NRM6 502 aa27.25■■□□□ 1.95
SMARCD1-209ENST00000550477 ADCY6O43306 1168 aa27.24■■□□□ 1.95
SMARCD1-209ENST00000550477 ORC4O43929 436 aa27.24■■□□□ 1.95
SMARCD1-209ENST00000550477 ALX1Q15699 326 aa27.24■■□□□ 1.95
SMARCD1-209ENST00000550477 NSMFQ6X4W1 530 aa27.24■■□□□ 1.95
SMARCD1-209ENST00000550477 TLK2Q86UE8 772 aa27.24■■□□□ 1.95
SMARCD1-209ENST00000550477 KATNBL1Q9H079 304 aa27.24■■□□□ 1.95
SMARCD1-209ENST00000550477 MTIF3Q9H2K0 278 aaKnown RBP27.24■■□□□ 1.95
SMARCD1-209ENST00000550477 CYP39A1Q9NYL5 469 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms