RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 C11orf97A0A1B0GVM6 126 aaPredicted RBP18■□□□□ 0.47
SVOP-203ENST00000550436 CNTN2Q02246 1040 aa18■□□□□ 0.47
SVOP-203ENST00000550436 TJAP1Q5JTD0 557 aa18■□□□□ 0.47
SVOP-203ENST00000550436 GNASQ5JWF2 1037 aa18■□□□□ 0.47
SVOP-203ENST00000550436 CCDC129Q6ZRS4 1044 aa18■□□□□ 0.47
SVOP-203ENST00000550436 ARMCX2Q7L311 632 aa18■□□□□ 0.47
SVOP-203ENST00000550436 MSL3Q8N5Y2 521 aaKnown RBP18■□□□□ 0.47
SVOP-203ENST00000550436 PRPF38AQ8NAV1 312 aaKnown RBP18■□□□□ 0.47
SVOP-203ENST00000550436 SYMPKQ92797 1274 aaKnown RBP18■□□□□ 0.47
SVOP-203ENST00000550436 KATNBL1Q9H079 304 aa18■□□□□ 0.47
SVOP-203ENST00000550436 UPF3AQ9H1J1 476 aaKnown RBP18■□□□□ 0.47
SVOP-203ENST00000550436 EPB41L4AQ9HCS5 686 aaPredicted RBP18■□□□□ 0.47
SVOP-203ENST00000550436 CXXC1Q9P0U4 656 aaPredicted RBP18■□□□□ 0.47
SVOP-203ENST00000550436 ASTN1O14525 1302 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 ELP1O95163 1332 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 UMODL1Q5DID0 1318 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 ARVCFO00192 962 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 ZBED4O75132 1171 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 CST5P28325 142 aaPredicted RBP17.99■□□□□ 0.47
SVOP-203ENST00000550436 GJA9P57773 515 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 PPIGQ13427 754 aaKnown RBP eCLIP17.99■□□□□ 0.47
SVOP-203ENST00000550436 CCDC85BQ15834 202 aaPredicted RBP17.99■□□□□ 0.47
SVOP-203ENST00000550436 SBK1Q52WX2 424 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 FAM126BQ8IXS8 530 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 LRRC47Q8N1G4 583 aaKnown RBP17.99■□□□□ 0.47
SVOP-203ENST00000550436 ANKRD35Q8N283 1001 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 OSBP2Q969R2 916 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 MKNK2Q9HBH9 465 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 SLC38A10Q9HBR0 1119 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 HOMER2Q9NSB8 354 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 ARPP21Q9UBL0 812 aaPredicted RBP17.99■□□□□ 0.47
SVOP-203ENST00000550436 PCDHB15Q9Y5E8 787 aa17.99■□□□□ 0.47
SVOP-203ENST00000550436 ATP2A1O14983 1001 aa17.98■□□□□ 0.47
SVOP-203ENST00000550436 TMEM63BQ5T3F8 832 aa17.98■□□□□ 0.47
SVOP-203ENST00000550436 TSHZ3Q63HK5 1081 aa17.98■□□□□ 0.47
SVOP-203ENST00000550436 ZNF467Q7Z7K2 595 aaPredicted RBP17.98■□□□□ 0.47
SVOP-203ENST00000550436 CCDC144CPQ8IYA2 1237 aa17.98■□□□□ 0.47
SVOP-203ENST00000550436 CEP95Q96GE4 821 aa17.98■□□□□ 0.47
SVOP-203ENST00000550436 TCF20Q9UGU0 1960 aaKnown RBP17.98■□□□□ 0.47
SVOP-203ENST00000550436 A0A0U1RQG5 324 aaPredicted RBP17.97■□□□□ 0.47
SVOP-203ENST00000550436 TNFRSF10AO00220 468 aa17.97■□□□□ 0.47
SVOP-203ENST00000550436 CXCL17Q6UXB2 119 aa17.97■□□□□ 0.47
SVOP-203ENST00000550436 PCSK9Q8NBP7 692 aaKnown RBP17.97■□□□□ 0.47
SVOP-203ENST00000550436 NKX2-4Q9H2Z4 354 aa17.97■□□□□ 0.47
SVOP-203ENST00000550436 ABHD16BQ9H3Z7 469 aa17.97■□□□□ 0.47
SVOP-203ENST00000550436 SOWAHBA6NEL2 793 aa17.96■□□□□ 0.47
SVOP-203ENST00000550436 M0R2C6 588 aa17.96■□□□□ 0.47
SVOP-203ENST00000550436 CD4P01730 458 aa17.96■□□□□ 0.47
SVOP-203ENST00000550436 COL9A1P20849 921 aa17.96■□□□□ 0.47
SVOP-203ENST00000550436 SNAP25P60880 206 aa17.96■□□□□ 0.47
SVOP-203ENST00000550436 ZSCAN25Q6NSZ9 544 aa17.96■□□□□ 0.47
SVOP-203ENST00000550436 TMEM199Q8N511 208 aa17.96■□□□□ 0.47
SVOP-203ENST00000550436 GAS2L1Q99501 681 aaPredicted RBP17.96■□□□□ 0.47
SVOP-203ENST00000550436 YBX2Q9Y2T7 364 aaKnown RBP17.96■□□□□ 0.47
SVOP-203ENST00000550436 CTDP1Q9Y5B0 961 aaPredicted RBP17.96■□□□□ 0.47
SVOP-203ENST00000550436 GRIN2DO15399 1336 aa17.96■□□□□ 0.46
SVOP-203ENST00000550436 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.95■□□□□ 0.46
SVOP-203ENST00000550436 FAM133AQ8N9E0 248 aa17.95■□□□□ 0.46
SVOP-203ENST00000550436 MKL1Q969V6 931 aa17.95■□□□□ 0.46
SVOP-203ENST00000550436 AGBL1Q96MI9 1066 aa17.95■□□□□ 0.46
SVOP-203ENST00000550436 LRRCC1Q9C099 1032 aa17.95■□□□□ 0.46
SVOP-203ENST00000550436 SPC25Q9HBM1 224 aa17.95■□□□□ 0.46
SVOP-203ENST00000550436 IL23AQ9NPF7 189 aa17.95■□□□□ 0.46
SVOP-203ENST00000550436 PDGFCQ9NRA1 345 aa17.95■□□□□ 0.46
SVOP-203ENST00000550436 MTMR4Q9NYA4 1195 aa17.95■□□□□ 0.46
SVOP-203ENST00000550436 MROH7Q68CQ1 1323 aa17.95■□□□□ 0.46
SVOP-203ENST00000550436 BDP1A6H8Y1 2624 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 IGFBP4P22692 258 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 RABGGTBP53611 331 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 CCL23P55773 120 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 TNFAIP2Q03169 654 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 SLFN13Q68D06 897 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 NOL8Q76FK4 1167 aaKnown RBP17.94■□□□□ 0.46
SVOP-203ENST00000550436 RASGRP2Q7LDG7 609 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 CHST13Q8NET6 341 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 VWCEQ96DN2 955 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 PURBQ96QR8 312 aaKnown RBP17.94■□□□□ 0.46
SVOP-203ENST00000550436 TRPV6Q9H1D0 765 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 DCTPP1Q9H773 170 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 FEM1BQ9UK73 627 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 ZNF536O15090 1300 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 LCTP09848 1927 aa17.94■□□□□ 0.46
SVOP-203ENST00000550436 LRRC37A2A6NM11 1700 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 TMEM232C9JQI7 657 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 GPAA1O43292 621 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 BMP3P12645 472 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 MYOGP15173 224 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 PSMC6P62333 389 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 PSRC1Q6PGN9 363 aaPredicted RBP17.93■□□□□ 0.46
SVOP-203ENST00000550436 EEPD1Q7L9B9 569 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 OTOP2Q7RTS6 562 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 ZNF444Q8N0Y2 327 aaPredicted RBP17.93■□□□□ 0.46
SVOP-203ENST00000550436 KBTBD3Q8NAB2 608 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 SLC43A3Q8NBI5 491 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 HERVK_113Q902F9 699 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 APPBP2Q92624 585 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 SEC62Q99442 399 aaKnown RBP17.93■□□□□ 0.46
SVOP-203ENST00000550436 A1CFQ9NQ94 594 aaKnown RBP17.93■□□□□ 0.46
SVOP-203ENST00000550436 ECHDC1Q9NTX5 307 aa17.93■□□□□ 0.46
SVOP-203ENST00000550436 ISY1Q9ULR0 285 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms