RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	BARHL2	Q9NY43	387 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	HOXC10	Q9NYD6	342 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	PPP1R9A	Q9ULJ8	1098 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	AGTPBP1	Q9UPW5	1226 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	TLL2	Q9Y6L7	1015 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	PHIP	Q8WWQ0	1821 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	MYPN	Q86TC9	1320 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	ZBED4	O75132	1171 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	NAPA	P54920	295 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	COG2	Q14746	738 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	SLC35G1	Q2M3R5	365 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	QRICH1	Q2TAL8	776 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	SPRYD7	Q5W111	196 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	KRT40	Q6A162	431 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	MCTP1	Q6DN14	999 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	GALNT17	Q6IS24	598 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	PPP1R18	Q6NYC8	613 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	CATSPERG	Q6ZRH7	1159 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	FBXO11	Q86XK2	927 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	AIFM3	Q96NN9	605 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	VPS54	Q9P1Q0	977 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	PNMA3	Q9UL41	463 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	MTMR6	Q9Y217	621 aa		13.38	□□□□□ -0.27
CNOT2-223	ENST00000550160	BRD1	O95696	1058 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	MMP1	P03956	469 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	OSBP	P22059	807 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	GNA11	P29992	359 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	HOXA7	P31268	230 aa	Predicted RBP	13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	GUCY1B3	Q02153	619 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	DGKZ	Q13574	1117 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	WWC2	Q6AWC2	1192 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.37	□□□□□ -0.27	6e-6	■■□□□ 12
CNOT2-223	ENST00000550160	CCDC102A	Q96A19	550 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	HHIPL1	Q96JK4	782 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	GLT8D2	Q9H1C3	349 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	RANBP17	Q9H2T7	1088 aa	Known RBP	13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	C6orf50	Q9HD87	102 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	FBXO28	Q9NVF7	368 aa		13.37	□□□□□ -0.27
CNOT2-223	ENST00000550160	CCL15-CCL14	A0A0B4J2E2	113 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	ESYT2	A0FGR8	921 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	MANSC4	A6NHS7	340 aa	Predicted RBP	13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	STXBP3	O00186	592 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	F13A1	P00488	732 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	GJA5	P36382	358 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	CCL15	Q16663	113 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	RASAL3	Q86YV0	1011 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	MB21D1	Q8N884	522 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	BICD2	Q8TD16	824 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	PHF20	Q9BVI0	1012 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	SLC45A1	Q9Y2W3	748 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	PCDHA1	Q9Y5I3	950 aa		13.36	□□□□□ -0.27
CNOT2-223	ENST00000550160	LOC285556	D6RIA3	1793 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	MYH6	P13533	1939 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	ICAM1	P05362	532 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	SLC10A3	P09131	477 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	KRT2	P35908	639 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	ADCY7	P51828	1080 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	OAZ1	P54368	228 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	MKRN3	Q13064	507 aa	Known RBP	13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	PKP1	Q13835	747 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	TREML2	Q5T2D2	321 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	OTUD7B	Q6GQQ9	843 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	CCDC174	Q6PII3	467 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	BRAP	Q7Z569	592 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	TEX2	Q8IWB9	1127 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	DIS3L2	Q8IYB7	885 aa	Known RBP	13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	ATG4C	Q96DT6	458 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	FOXP1	Q9H334	677 aa	Predicted RBP	13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	SLC38A10	Q9HBR0	1119 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	KCNJ14	Q9UNX9	436 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	ABCB11	O95342	1321 aa		13.35	□□□□□ -0.27
CNOT2-223	ENST00000550160	SMCO2	A6NFE2	343 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	VWA5A	O00534	786 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	MRPL12	P52815	198 aa	Known RBP	13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	INHBE	P58166	350 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	SNAP25	P60880	206 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	KIF23	Q02241	960 aa	Predicted RBP	13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	USH1G	Q495M9	461 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	MCTP2	Q6DN12	878 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	ANKRD23	Q86SG2	305 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	FERMT3	Q86UX7	667 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	DAGLB	Q8NCG7	672 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	CUL5	Q93034	780 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	COA7	Q96BR5	231 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	MS4A4A	Q96JQ5	239 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	GBP4	Q96PP9	640 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	ZMYND12	Q9H0C1	365 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	CREBZF	Q9NS37	354 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	GJB4	Q9NTQ9	266 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	CCPG1	Q9ULG6	757 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	PCDHA4	Q9UN74	947 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	MRPL11	Q9Y3B7	192 aa	Known RBP	13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	PTPRF	P10586	1907 aa		13.34	□□□□□ -0.27
CNOT2-223	ENST00000550160	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms