RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ETF1P62495 437 aaKnown RBP10.08□□□□□ -0.8
TMEM116-209ENST00000550020 EVX2Q03828 476 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 TRAF1Q13077 416 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 GRIK5Q16478 980 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 INF2Q27J81 1249 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 ZNF772Q68DY9 489 aaPredicted RBP10.08□□□□□ -0.8
TMEM116-209ENST00000550020 STYK1Q6J9G0 422 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 KLHL10Q6JEL2 608 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 CABP7Q86V35 215 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 TEX2Q8IWB9 1127 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 TRMT44Q8IYL2 757 aaKnown RBP10.08□□□□□ -0.8
TMEM116-209ENST00000550020 SLC44A5Q8NCS7 719 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 SUPT20HQ8NEM7 779 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 ANKRD7Q92527 254 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 DPF2Q92785 391 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 IQCDQ96DY2 449 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 CEP95Q96GE4 821 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 DHTKD1Q96HY7 919 aaPredicted RBP10.08□□□□□ -0.8
TMEM116-209ENST00000550020 GPR101Q96P66 508 aaPredicted RBP10.08□□□□□ -0.8
TMEM116-209ENST00000550020 STK17AQ9UEE5 414 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 IGKV6D-41A0A0C4DH26 115 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 PNMA6FA0A0J9YX94 578 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 RIMBP2O15034 1052 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 CYTH3O43739 400 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 CCNT1O60563 726 aaKnown RBP10.07□□□□□ -0.8
TMEM116-209ENST00000550020 FGFR1OPO95684 399 aaKnown RBP10.07□□□□□ -0.8
TMEM116-209ENST00000550020 CCDC175P0C221 793 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 SNHG28P0DPA3 235 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 PDHBP11177 359 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 TUBB4BP68371 445 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 GABPAQ06546 454 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 TUBB2AQ13885 445 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 ZNF827Q17R98 1081 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 TSR1Q2NL82 804 aaKnown RBP10.07□□□□□ -0.8
TMEM116-209ENST00000550020 CC2D2BQ6DHV5 1058 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 IGSF22Q8N9C0 903 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 NELFBQ8WX92 580 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 CDK5RAP3Q96JB5 506 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 TUBB2BQ9BVA1 445 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 CCDC94Q9BW85 323 aaPredicted RBP10.07□□□□□ -0.8
TMEM116-209ENST00000550020 THAP9Q9H5L6 903 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 SAMSN1Q9NSI8 373 aaKnown RBP10.07□□□□□ -0.8
TMEM116-209ENST00000550020 EXOC1Q9NV70 894 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 ADD3Q9UEY8 706 aaKnown RBP10.07□□□□□ -0.8
TMEM116-209ENST00000550020 CTNND2Q9UQB3 1225 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 MTMR7Q9Y216 660 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 STK24Q9Y6E0 443 aa10.07□□□□□ -0.8
TMEM116-209ENST00000550020 DDX60LQ5H9U9 1706 aaKnown RBP10.07□□□□□ -0.8
TMEM116-209ENST00000550020 USP27XA6NNY8 438 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 TMEM232C9JQI7 657 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 H0YIN7 160 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 N4BP3O15049 544 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 RHOBTB3O94955 611 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 GOLGA8HP0CJ92 632 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 ZNF543Q08ER8 600 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 PICALMQ13492 652 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 PDIA5Q14554 519 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 SEPT2Q15019 361 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 KARSQ15046 597 aaKnown RBP10.06□□□□□ -0.8
TMEM116-209ENST00000550020 IL17AQ16552 155 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 LETM2Q2VYF4 491 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 COBLL1Q53SF7 1204 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 NOM1Q5C9Z4 860 aaKnown RBP10.06□□□□□ -0.8
TMEM116-209ENST00000550020 STRIP1Q5VSL9 837 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 CNNM4Q6P4Q7 775 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 USP17L2Q6R6M4 530 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 CUL5Q93034 780 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 ZDHHC15Q96MV8 337 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 PIGSQ96S52 555 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 FEZ1Q99689 392 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 L2HGDHQ9H9P8 463 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 KBTBD4Q9NVX7 518 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 SYNPO2Q9UMS6 1093 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 PPP2R2CQ9Y2T4 447 aa10.06□□□□□ -0.8
TMEM116-209ENST00000550020 PVALEFA0A1B0GWK0 134 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 A0A1W2PQC6 194 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 USP17L5A8MUK1 530 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 KCNJ18B7U540 433 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 WNT7AO00755 349 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 CD44P16070 742 aaKnown RBP10.05□□□□□ -0.8
TMEM116-209ENST00000550020 CASQ1P31415 396 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 FXR2P51116 673 aaKnown RBP eCLIP10.05□□□□□ -0.8
TMEM116-209ENST00000550020 KCNJ12Q14500 433 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 CALCRLQ16602 461 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 TCP11X2Q5H9J9 407 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 PPP4R3AQ6IN85 833 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 TYW1BQ6NUM6 668 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 SYT10Q6XYQ8 523 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 SV2BQ7L1I2 683 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 TMTC1Q8IUR5 882 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 ADSSL1Q8N142 457 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 TC2NQ8N9U0 490 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 RETREG2Q8NC44 543 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 GIMAP8Q8ND71 665 aaPredicted RBP10.05□□□□□ -0.8
TMEM116-209ENST00000550020 MNS1Q8NEH6 495 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 RASGRP4Q8TDF6 673 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 TBCKQ8TEA7 893 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 DCAF4Q8WV16 495 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 CNKSR1Q969H4 720 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms