RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 ZNF143P52747 638 aaPredicted RBP5.93□□□□□ -1.46
CPNE8-206ENST00000549842 PMS1P54277 932 aaKnown RBP5.93□□□□□ -1.46
CPNE8-206ENST00000549842 PLEKHG6Q3KR16 790 aa5.93□□□□□ -1.46
CPNE8-206ENST00000549842 CCDC181Q5TID7 509 aa5.93□□□□□ -1.46
CPNE8-206ENST00000549842 ZNF655Q8N720 491 aaPredicted RBP5.93□□□□□ -1.46
CPNE8-206ENST00000549842 LRRN4CLQ8ND94 238 aa5.93□□□□□ -1.46
CPNE8-206ENST00000549842 KLHL6Q8WZ60 621 aa5.93□□□□□ -1.46
CPNE8-206ENST00000549842 NINJ1Q92982 152 aa5.93□□□□□ -1.46
CPNE8-206ENST00000549842 IRF2BPLQ9H1B7 796 aa5.93□□□□□ -1.46
CPNE8-206ENST00000549842 KLHL42Q9P2K6 505 aa5.93□□□□□ -1.46
CPNE8-206ENST00000549842 PCDHB10Q9UN67 800 aa5.93□□□□□ -1.46
CPNE8-206ENST00000549842 ZNF281Q9Y2X9 895 aa5.93□□□□□ -1.46
CPNE8-206ENST00000549842 ADCY3O60266 1144 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 RFPL3O75679 317 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 NMIQ13287 307 aaPredicted RBP5.92□□□□□ -1.46
CPNE8-206ENST00000549842 TM4SF20Q53R12 229 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 CREG2Q8IUH2 290 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 MFSD3Q96ES6 412 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 ASIC4Q96FT7 647 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 SLC6A18Q96N87 628 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 IPO9Q96P70 1041 aaKnown RBP5.92□□□□□ -1.46
CPNE8-206ENST00000549842 FMNL2Q96PY5 1086 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 ALPK1Q96QP1 1244 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 HDAC8Q9BY41 377 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 DUSP13Q9UII6 198 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 CTNND2Q9UQB3 1225 aa5.92□□□□□ -1.46
CPNE8-206ENST00000549842 SHISA3A0PJX4 238 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 FAM86C2PA6NEL3 165 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 RBAK-RBAKDNI3L0D1 243 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 SIGLEC6O43699 453 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 PAPLNO95428 1278 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 AFMP43652 599 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 AUHQ13825 339 aaKnown RBP5.91□□□□□ -1.46
CPNE8-206ENST00000549842 CLEC16AQ2KHT3 1053 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 RNF111Q6ZNA4 994 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 NIM1KQ8IY84 436 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 STAG1Q8WVM7 1258 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 APBA2Q99767 749 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 PRDM14Q9GZV8 571 aa5.91□□□□□ -1.46
CPNE8-206ENST00000549842 ANKRD34BA5PLL1 514 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 WASH4PA8MWX3 477 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 PAX4O43316 350 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 PARNO95453 639 aaKnown RBP5.9□□□□□ -1.46
CPNE8-206ENST00000549842 PDGFRBP09619 1106 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 CNGA1P29973 690 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 C21orf62-AS1Q17RA5 79 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 SV2CQ496J9 727 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 C7orf61Q8IZ16 206 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 LINC00116Q8NCU8 138 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 CHAC2Q8WUX2 184 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 CDC6Q99741 560 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 DHRS4Q9BTZ2 278 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 CHMP4AQ9BY43 222 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 C19orf73Q9NVV2 129 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 PCDHB12Q9Y5F1 795 aa5.9□□□□□ -1.46
CPNE8-206ENST00000549842 A0A087WZG4 1122 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 PLD2O14939 933 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 S100BP04271 92 aaPredicted RBP5.89□□□□□ -1.47
CPNE8-206ENST00000549842 MYCLP1P12525 358 aaPredicted RBP5.89□□□□□ -1.47
CPNE8-206ENST00000549842 TEKQ02763 1124 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 EGR3Q06889 387 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 PABPC4Q13310 644 aaKnown RBP eCLIP5.89□□□□□ -1.47
CPNE8-206ENST00000549842 HSP90AA2PQ14568 343 aaPredicted RBP5.89□□□□□ -1.47
CPNE8-206ENST00000549842 FNDC3BQ53EP0 1204 aaKnown RBP5.89□□□□□ -1.47
CPNE8-206ENST00000549842 FERMT3Q86UX7 667 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 DHX37Q8IY37 1157 aaKnown RBP5.89□□□□□ -1.47
CPNE8-206ENST00000549842 USHBP1Q8N6Y0 703 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 TCTN2Q96GX1 697 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 CEP89Q96ST8 783 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 MKRN2Q9H000 416 aaKnown RBP5.89□□□□□ -1.47
CPNE8-206ENST00000549842 CAAP1Q9H8G2 361 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 PRDM7Q9NQW5 492 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 HOMER2Q9NSB8 354 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 TMEM59LQ9UK28 342 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 PCDHA11Q9Y5I1 949 aa5.89□□□□□ -1.47
CPNE8-206ENST00000549842 TRAV20A0A0B4J274 112 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 A0A1W2PQU0 124 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 ENDOUP21128 410 aaKnown RBP5.88□□□□□ -1.47
CPNE8-206ENST00000549842 LTKP29376 864 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 SOX5P35711 763 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 STAT3P40763 770 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 NR0B2Q15466 257 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 FOXB2Q5VYV0 432 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 TMC3Q7Z5M5 1100 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 SCUBE1Q8IWY4 988 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 CCDC144CPQ8IYA2 1237 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 KISS1RQ969F8 398 aaPredicted RBP5.88□□□□□ -1.47
CPNE8-206ENST00000549842 ZNF512BQ96KM6 892 aaPredicted RBP5.88□□□□□ -1.47
CPNE8-206ENST00000549842 CHST7Q9NS84 486 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 SLAMF8Q9P0V8 285 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 CHPF2Q9P2E5 772 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 LRP2BPQ9P2M1 347 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 ATP8A1Q9Y2Q0 1164 aa5.88□□□□□ -1.47
CPNE8-206ENST00000549842 TRBV23-1A0A0A0MS06 115 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 C9IYK1 514 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 SHOXO15266 292 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 PRAMEF1O95521 474 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 HPXP02790 462 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 ZGLP1P0C6A0 271 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 L1CAMP32004 1257 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms