RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 SALL3Q9BXA9 1300 aa8.02□□□□□ -1.13
TMEM116-208ENST00000549537 MOXD2PA6NHM9 499 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 C19orf81C9J6K1 198 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 SMIM22K7EJ46 135 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 PRKAB2O43741 272 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 CYP2D6P10635 497 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 EN2P19622 333 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-208ENST00000549537 LORP23490 312 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-208ENST00000549537 HOXD10P28358 340 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 GCLCP48506 637 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-208ENST00000549537 FXR1P51114 621 aaKnown RBP eCLIP8.01□□□□□ -1.13
TMEM116-208ENST00000549537 PABPC4Q13310 644 aaKnown RBP eCLIP8.01□□□□□ -1.13
TMEM116-208ENST00000549537 CERKLQ49MI3 558 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-208ENST00000549537 TSHZ3Q63HK5 1081 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 PPP2R2DQ66LE6 453 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 DESI1Q6ICB0 168 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 NBPF11Q86T75 865 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 SMCR8Q8TEV9 937 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-208ENST00000549537 GCC1Q96CN9 775 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 C12orf42Q96LP6 360 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 CRBNQ96SW2 442 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 TRIM34Q9BYJ4 488 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.01□□□□□ -1.131e-6■□□□□ 8.8
TMEM116-208ENST00000549537 PUS7LQ9H0K6 701 aaKnown RBP8.01□□□□□ -1.13
TMEM116-208ENST00000549537 ATP8A2Q9NTI2 1148 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 MCM9Q9NXL9 1143 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 MORF4L1Q9UBU8 362 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 DOCK3Q8IZD9 2030 aa8.01□□□□□ -1.13
TMEM116-208ENST00000549537 VCANP13611 3396 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 MYH8P13535 1937 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 PEX10O60683 326 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 ADH1CP00326 375 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 POLR3DP05423 398 aaPredicted RBP8□□□□□ -1.13
TMEM116-208ENST00000549537 GRK4P32298 578 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 FLT3LGP49771 235 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 HERVK_113P62684 666 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 NNTQ13423 1086 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 MTFR1Q15390 333 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 ABCB5Q2M3G0 1257 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 C12orf60Q5U649 245 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L2Q6R6M4 530 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 KBTBD3Q8NAB2 608 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 ZNF511Q8NB15 262 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 SLC44A5Q8NCS7 719 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 PI4K2BQ8TCG2 481 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 RAET1EQ8TD07 263 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 ACER1Q8TDN7 264 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 OTUD7AQ8TE49 926 aaPredicted RBP8□□□□□ -1.13
TMEM116-208ENST00000549537 BAP1Q92560 729 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 SHISA4Q96DD7 197 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 STRBPQ96SI9 672 aaKnown RBP8□□□□□ -1.13
TMEM116-208ENST00000549537 P2RX7Q99572 595 aaKnown RBP8□□□□□ -1.13
TMEM116-208ENST00000549537 KIAA1683Q9H0B3 1180 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 TXNRD2Q9NNW7 524 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 TMOD4Q9NZQ9 345 aa8□□□□□ -1.13
TMEM116-208ENST00000549537 RLFQ13129 1914 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 GREB1LQ9C091 1923 aaPredicted RBP7.99□□□□□ -1.13
TMEM116-208ENST00000549537 CYP2D7A0A087X1C5 515 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 A0A0G2JMZ2 1700 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 A0A1W2PRG0 241 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 TNPO2O14787 897 aaKnown RBP7.99□□□□□ -1.13
TMEM116-208ENST00000549537 RFC5P40937 340 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 HDAC1Q13547 482 aaPredicted RBP7.99□□□□□ -1.13
TMEM116-208ENST00000549537 SEPT2Q15019 361 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 RAB3GAP1Q15042 981 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 ZSCAN25Q6NSZ9 544 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 CTR9Q6PD62 1173 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 SIAH1Q8IUQ4 282 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 OSBP2Q969R2 916 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 CCDC97Q96F63 343 aaPredicted RBP7.99□□□□□ -1.13
TMEM116-208ENST00000549537 DYNLL2Q96FJ2 89 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 RBPJLQ9UBG7 517 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 GJD2Q9UKL4 321 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 TTC41PQ6P2S7 1318 aa7.99□□□□□ -1.13
TMEM116-208ENST00000549537 GSG1L2A8MUP6 293 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L12C9JPN9 530 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L21D6R901 530 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 ADCY3O60266 1144 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 CNMDO75829 334 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 MYCP01106 439 aaPredicted RBP7.98□□□□□ -1.13
TMEM116-208ENST00000549537 VSIG8P0DPA2 414 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 AKR1B1P15121 316 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 ELNP15502 786 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 VCAM1P19320 739 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 NDUFV2P19404 249 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 USP14P54578 494 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 IRX3P78415 501 aaPredicted RBP7.98□□□□□ -1.13
TMEM116-208ENST00000549537 MCM6Q14566 821 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 TMEM259Q4ZIN3 620 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 KIAA1755Q5JYT7 1200 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 LBX2Q6XYB7 198 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 CATSPERGQ6ZRH7 1159 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 TMEM179Q6ZVK1 233 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 C16orf86Q6ZW13 317 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 UBE2Q1Q7Z7E8 422 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 BANK1Q8NDB2 785 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 FAM174AQ8TBP5 190 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 APPBP2Q92624 585 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 GPATCH3Q96I76 525 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 YTHDC1Q96MU7 727 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms