RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 ADCY7P51828 1080 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 EARS2Q5JPH6 523 aaKnown RBP13.84□□□□□ -0.19
PTPRR-209ENST00000549308 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.84□□□□□ -0.19
PTPRR-209ENST00000549308 FBXO11Q86XK2 927 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 LINC00301Q8NCQ3 95 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 PCDHA6Q9UN73 950 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 PCDHA8Q9Y5H6 950 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 SNCAIPQ9Y6H5 919 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 OTOFQ9HC10 1997 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 PHIPQ8WWQ0 1821 aa13.84□□□□□ -0.19
PTPRR-209ENST00000549308 CCDC194A0A1B0GVG4 234 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 ADAMTS3O15072 1205 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 SPTLC2O15270 562 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 BACE1P56817 501 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 DGKZQ13574 1117 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 MAP1SQ66K74 1059 aaPredicted RBP13.83□□□□□ -0.2
PTPRR-209ENST00000549308 ARMC9Q7Z3E5 817 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 RASGRP4Q8TDF6 673 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 KCNG4Q8TDN1 519 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 AMNQ9BXJ7 453 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 TANGO6Q9C0B7 1094 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 EMILIN3Q9NT22 766 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 PAPPA2Q9BXP8 1791 aa13.83□□□□□ -0.2
PTPRR-209ENST00000549308 C19orf81C9J6K1 198 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 ME1P48163 572 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 TOB1P50616 345 aaPredicted RBP13.82□□□□□ -0.2
PTPRR-209ENST00000549308 SLC39A14Q15043 492 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 NOM1Q5C9Z4 860 aaKnown RBP13.82□□□□□ -0.2
PTPRR-209ENST00000549308 MOB2Q70IA6 237 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 ANKRD13AQ8IZ07 590 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 PGBD1Q96JS3 809 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 RPAP3Q9H6T3 665 aaPredicted RBP13.82□□□□□ -0.2
PTPRR-209ENST00000549308 ELP3Q9H9T3 547 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 FBXO28Q9NVF7 368 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 TMOD4Q9NZQ9 345 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 CEP131Q9UPN4 1083 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 PCDHA1Q9Y5I3 950 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 M0R2N6 131 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 VCAM1P19320 739 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 HMGCS2P54868 508 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 TRAF1Q13077 416 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 USH1GQ495M9 461 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 TTC38Q5R3I4 469 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 CAVIN1Q6NZI2 390 aaKnown RBP13.82□□□□□ -0.2
PTPRR-209ENST00000549308 CCDC174Q6PII3 467 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 KRT25Q7Z3Z0 450 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 REXO1Q8N1G1 1221 aaKnown RBP13.82□□□□□ -0.2
PTPRR-209ENST00000549308 JMYQ8N9B5 988 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 CUL5Q93034 780 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 SLF1Q9BQI6 1058 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
PTPRR-209ENST00000549308 RANBP17Q9H2T7 1088 aaKnown RBP13.82□□□□□ -0.2
PTPRR-209ENST00000549308 ZNF408Q9H9D4 720 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 RIC8AQ9NPQ8 531 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 BIN2Q9UBW5 565 aaPredicted RBP13.82□□□□□ -0.2
PTPRR-209ENST00000549308 AFG3L2Q9Y4W6 797 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 PCDHB6Q9Y5E3 794 aa13.82□□□□□ -0.2
PTPRR-209ENST00000549308 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
PTPRR-209ENST00000549308 MRPL12P52815 198 aaKnown RBP13.81□□□□□ -0.2
PTPRR-209ENST00000549308 NONOQ15233 471 aaKnown RBP eCLIP13.81□□□□□ -0.2
PTPRR-209ENST00000549308 PTPAQ15257 358 aa13.81□□□□□ -0.2
PTPRR-209ENST00000549308 JAKMIP3Q5VZ66 844 aa13.81□□□□□ -0.2
PTPRR-209ENST00000549308 LDHDQ86WU2 507 aa13.81□□□□□ -0.2
PTPRR-209ENST00000549308 ZNF526Q8TF50 670 aaPredicted RBP13.81□□□□□ -0.2
PTPRR-209ENST00000549308 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
PTPRR-209ENST00000549308 GLT8D2Q9H1C3 349 aa13.81□□□□□ -0.2
PTPRR-209ENST00000549308 TMEM260Q9NX78 707 aa13.81□□□□□ -0.2
PTPRR-209ENST00000549308 PCDHA7Q9UN72 937 aa13.81□□□□□ -0.2
PTPRR-209ENST00000549308 CTDP1Q9Y5B0 961 aaPredicted RBP13.81□□□□□ -0.2
PTPRR-209ENST00000549308 TRAF5O00463 557 aa13.8□□□□□ -0.2
PTPRR-209ENST00000549308 PPP6R2O75170 966 aa13.8□□□□□ -0.2
PTPRR-209ENST00000549308 FLOT1O75955 427 aa13.8□□□□□ -0.2
PTPRR-209ENST00000549308 MARCKSP29966 332 aaPredicted RBP13.8□□□□□ -0.2
PTPRR-209ENST00000549308 MAP3K11Q16584 847 aa13.8□□□□□ -0.2
PTPRR-209ENST00000549308 PRPF38AQ8NAV1 312 aaKnown RBP13.8□□□□□ -0.2
PTPRR-209ENST00000549308 RBM46Q8TBY0 533 aaKnown RBP13.8□□□□□ -0.2
PTPRR-209ENST00000549308 CLMNQ96JQ2 1002 aa13.8□□□□□ -0.2
PTPRR-209ENST00000549308 PSTPIP2Q9H939 334 aa13.8□□□□□ -0.2
PTPRR-209ENST00000549308 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.8□□□□□ -0.2
PTPRR-209ENST00000549308 BMP15O95972 392 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 ZNF174Q15697 407 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 UBE2SQ16763 222 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 INF2Q27J81 1249 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 SH3D19Q5HYK7 790 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 ERO1BQ86YB8 467 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 CCAR1Q8IX12 1150 aaKnown RBP13.79□□□□□ -0.2
PTPRR-209ENST00000549308 SYAP1Q96A49 352 aaPredicted RBP13.79□□□□□ -0.2
PTPRR-209ENST00000549308 NMRK2Q9NPI5 230 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 PPP1R9AQ9ULJ8 1098 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 ZBED4O75132 1171 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 TAL1P17542 331 aaPredicted RBP13.79□□□□□ -0.2
PTPRR-209ENST00000549308 PPATQ06203 517 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 CNKSR2Q8WXI2 1034 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
PTPRR-209ENST00000549308 ABCB11O95342 1321 aa13.78□□□□□ -0.2
PTPRR-209ENST00000549308 SPDYE5A6NIY4 337 aa13.78□□□□□ -0.2
PTPRR-209ENST00000549308 CUTAO60888 179 aa13.78□□□□□ -0.2
PTPRR-209ENST00000549308 LIG1P18858 919 aa13.78□□□□□ -0.2
PTPRR-209ENST00000549308 FMR1Q06787 632 aaKnown RBP eCLIP13.78□□□□□ -0.2
PTPRR-209ENST00000549308 ADALQ6DHV7 355 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms