RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 ZMYM6O95789 1325 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 CEP290O15078 2479 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 ZNF865P0CJ78 1059 aaPredicted RBP11.36□□□□□ -0.59
GCN1-205ENST00000548821 ACLYP53396 1101 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 ANO1Q5XXA6 986 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 IQSEC1Q6DN90 963 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 NOL8Q76FK4 1167 aaKnown RBP11.36□□□□□ -0.59
GCN1-205ENST00000548821 IQCA1Q86XH1 822 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 LRRC47Q8N1G4 583 aaKnown RBP11.36□□□□□ -0.59
GCN1-205ENST00000548821 ESR2Q92731 530 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 RILPL2Q969X0 211 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 FERMT2Q96AC1 680 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 TRERF1Q96PN7 1200 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 SEC62Q99442 399 aaKnown RBP11.36□□□□□ -0.59
GCN1-205ENST00000548821 TMEM39AQ9NV64 488 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.36□□□□□ -0.59
GCN1-205ENST00000548821 CTNNA3Q9UI47 895 aa11.36□□□□□ -0.59
GCN1-205ENST00000548821 MYH8P13535 1937 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 A0A1W2PQ45 241 aaPredicted RBP11.35□□□□□ -0.59
GCN1-205ENST00000548821 A0A1W2PQY0 241 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 ZNF213O14771 459 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 PGK1P00558 417 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 FGAP02671 866 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 FGRP09769 529 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 C6orf222P0C671 652 aaPredicted RBP11.35□□□□□ -0.59
GCN1-205ENST00000548821 ALAS1P13196 640 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 CST5P28325 142 aaPredicted RBP11.35□□□□□ -0.59
GCN1-205ENST00000548821 TNFAIP2Q03169 654 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 TLE2Q04725 743 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 CCDC96Q2M329 555 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 TRIM60Q495X7 471 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 GNASQ5JWF2 1037 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 ZNF697Q5TEC3 545 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 ANKRD33Q7Z3H0 272 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 CRBNQ96SW2 442 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 MTIF3Q9H2K0 278 aaKnown RBP11.35□□□□□ -0.59
GCN1-205ENST00000548821 RNF146Q9NTX7 359 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 STXBP5LQ9Y2K9 1186 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 Q9Y3F1 56 aa11.35□□□□□ -0.59
GCN1-205ENST00000548821 A0A0U1RQG5 324 aaPredicted RBP11.34□□□□□ -0.59
GCN1-205ENST00000548821 SMIM22K7EJ46 135 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 KIAA0355O15063 1070 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 ICAM1P05362 532 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 GJA9P57773 515 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 TRAF1Q13077 416 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 KCNA10Q16322 511 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 CCDC144BQ3MJ40 725 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 RRP12Q5JTH9 1297 aaKnown RBP11.34□□□□□ -0.59
GCN1-205ENST00000548821 GPATCH4Q5T3I0 446 aaKnown RBP11.34□□□□□ -0.59
GCN1-205ENST00000548821 ARMCX2Q7L311 632 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 TMEM199Q8N511 208 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 LRCH3Q96II8 777 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 HOMER2Q9NSB8 354 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 DIAPH3Q9NSV4 1193 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 CCPG1Q9ULG6 757 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
GCN1-205ENST00000548821 RIPK3Q9Y572 518 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 MYH7P12883 1935 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 RAD50Q92878 1312 aa11.34□□□□□ -0.59
GCN1-205ENST00000548821 A0A0G2JMZ2 1700 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 TMEM265A0A087WTH1 108 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 PQBP1O60828 265 aaKnown RBP11.33□□□□□ -0.6
GCN1-205ENST00000548821 ADAMTS4O75173 837 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 SNAI1O95863 264 aaPredicted RBP11.33□□□□□ -0.6
GCN1-205ENST00000548821 HSPD1P10809 573 aaKnown RBP11.33□□□□□ -0.6
GCN1-205ENST00000548821 SMAD3P84022 425 aaKnown RBP11.33□□□□□ -0.6
GCN1-205ENST00000548821 FPGSQ05932 587 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 CTDSPL2Q05D32 466 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 AKNAD1Q5T1N1 836 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 BTNL9Q6UXG8 535 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 CHD1LQ86WJ1 897 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 DGKHQ86XP1 1220 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 SMC5Q8IY18 1101 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 CCDC144CPQ8IYA2 1237 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 KLHDC9Q8NEP7 349 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 BADQ92934 168 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 OSBPL3Q9H4L5 887 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 CNNM2Q9H8M5 875 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 VTA1Q9NP79 307 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 GPHNQ9NQX3 736 aaPredicted RBP11.33□□□□□ -0.6
GCN1-205ENST00000548821 PDLIM7Q9NR12 457 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 PRR12Q9ULL5 1215 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 TRIOBPQ9H2D6 2365 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 BAZ2AQ9UIF9 1905 aaKnown RBP11.33□□□□□ -0.6
GCN1-205ENST00000548821 CCDC171Q6TFL3 1326 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 SALL3Q9BXA9 1300 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 SYNRGQ9UMZ2 1314 aa11.33□□□□□ -0.6
GCN1-205ENST00000548821 SOX1O00570 391 aaPredicted RBP11.32□□□□□ -0.6
GCN1-205ENST00000548821 KPNA6O60684 536 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 ASGR1P07306 291 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 TAL1P17542 331 aaPredicted RBP11.32□□□□□ -0.6
GCN1-205ENST00000548821 NOVP48745 357 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 NKX3-2P78367 333 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 PPIGQ13427 754 aaKnown RBP eCLIP11.32□□□□□ -0.69e-11■■□□□ 12
GCN1-205ENST00000548821 IMMTQ16891 758 aaKnown RBP11.32□□□□□ -0.6
GCN1-205ENST00000548821 SYDE2Q5VT97 1194 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 KCTD1Q719H9 257 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 FAM133AQ8N9E0 248 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 OTUD7AQ8TE49 926 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms