RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 DDX11Q96FC9 970 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 TEX13BQ9BXU2 312 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 UPF3AQ9H1J1 476 aaKnown RBP16.23■□□□□ 0.19
CCDC59-202ENST00000547758 MTIF3Q9H2K0 278 aaKnown RBP16.23■□□□□ 0.19
CCDC59-202ENST00000547758 NKX2-4Q9H2Z4 354 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 ARMT1Q9H993 441 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 KANSL2Q9H9L4 492 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 SPC25Q9HBM1 224 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 IL23AQ9NPF7 189 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 EXOC6BQ9Y2D4 811 aa16.23■□□□□ 0.19
CCDC59-202ENST00000547758 DNAJC25-GNG10A0A024R161 153 aa16.22■□□□□ 0.19
CCDC59-202ENST00000547758 SMIM22K7EJ46 135 aa16.22■□□□□ 0.19
CCDC59-202ENST00000547758 GOLIM4O00461 696 aa16.22■□□□□ 0.19
CCDC59-202ENST00000547758 ADCY6O43306 1168 aa16.22■□□□□ 0.19
CCDC59-202ENST00000547758 PRKAB2O43741 272 aa16.22■□□□□ 0.19
CCDC59-202ENST00000547758 GJA9P57773 515 aa16.22■□□□□ 0.19
CCDC59-202ENST00000547758 ACVR2BQ13705 512 aa16.22■□□□□ 0.19
CCDC59-202ENST00000547758 SNRNP48Q6IEG0 339 aaKnown RBP16.22■□□□□ 0.19
CCDC59-202ENST00000547758 C16orf86Q6ZW13 317 aa16.22■□□□□ 0.19
CCDC59-202ENST00000547758 ZNF467Q7Z7K2 595 aaPredicted RBP16.22■□□□□ 0.19
CCDC59-202ENST00000547758 SLC28A3Q9HAS3 691 aa16.22■□□□□ 0.19
CCDC59-202ENST00000547758 ATP8A2Q9NTI2 1148 aa16.22■□□□□ 0.19
CCDC59-202ENST00000547758 CXXC1Q9P0U4 656 aaPredicted RBP16.22■□□□□ 0.19
CCDC59-202ENST00000547758 CYP2D7A0A087X1C5 515 aa16.21■□□□□ 0.19
CCDC59-202ENST00000547758 CYP2C18P33260 490 aa16.21■□□□□ 0.19
CCDC59-202ENST00000547758 CCDC144BQ3MJ40 725 aa16.21■□□□□ 0.19
CCDC59-202ENST00000547758 GNASQ5JWF2 1037 aa16.21■□□□□ 0.19
CCDC59-202ENST00000547758 C12orf60Q5U649 245 aa16.21■□□□□ 0.19
CCDC59-202ENST00000547758 AMOTL1Q8IY63 956 aa16.21■□□□□ 0.19
CCDC59-202ENST00000547758 NECAB3Q96P71 396 aaPredicted RBP16.21■□□□□ 0.19
CCDC59-202ENST00000547758 DNAJC2Q99543 621 aaKnown RBP16.21■□□□□ 0.19
CCDC59-202ENST00000547758 SLF1Q9BQI6 1058 aa16.21■□□□□ 0.19
CCDC59-202ENST00000547758 C1QTNF1Q9BXJ1 281 aa16.21■□□□□ 0.19
CCDC59-202ENST00000547758 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.21■□□□□ 0.19
CCDC59-202ENST00000547758 YBX2Q9Y2T7 364 aaKnown RBP16.21■□□□□ 0.19
CCDC59-202ENST00000547758 RIPK3Q9Y572 518 aa16.21■□□□□ 0.19
CCDC59-202ENST00000547758 LRRC37A2A6NM11 1700 aa16.21■□□□□ 0.19
CCDC59-202ENST00000547758 MBD4O95243 580 aa16.2■□□□□ 0.18
CCDC59-202ENST00000547758 CD4P01730 458 aa16.2■□□□□ 0.18
CCDC59-202ENST00000547758 CEP85Q6P2H3 762 aa16.2■□□□□ 0.18
CCDC59-202ENST00000547758 ITPRIPQ8IWB1 547 aa16.2■□□□□ 0.18
CCDC59-202ENST00000547758 FTSJ3Q8IY81 847 aaKnown RBP16.2■□□□□ 0.18
CCDC59-202ENST00000547758 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.18
CCDC59-202ENST00000547758 FAM212AQ96EL1 285 aa16.2■□□□□ 0.18
CCDC59-202ENST00000547758 ABHD16BQ9H3Z7 469 aa16.2■□□□□ 0.18
CCDC59-202ENST00000547758 IL1RAPL2Q9NP60 686 aa16.2■□□□□ 0.18
CCDC59-202ENST00000547758 USP17L12C9JPN9 530 aa16.19■□□□□ 0.18
CCDC59-202ENST00000547758 USP17L21D6R901 530 aa16.19■□□□□ 0.18
CCDC59-202ENST00000547758 FGBP02675 491 aa16.19■□□□□ 0.18
CCDC59-202ENST00000547758 MICALL1Q8N3F8 863 aa16.19■□□□□ 0.18
CCDC59-202ENST00000547758 NUP88Q99567 741 aaPredicted RBP16.19■□□□□ 0.18
CCDC59-202ENST00000547758 SCN5AQ14524 2016 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 ATP2A1O14983 1001 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 CTAGE5O15320 804 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 BMP1P13497 986 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 ADD2P35612 726 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 SLC4A3P48751 1232 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 SLFNL1Q499Z3 407 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 PPP2R2DQ66LE6 453 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCDC59-202ENST00000547758 ARMCX2Q7L311 632 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 OTOP2Q7RTS6 562 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 RHPN1Q8TCX5 695 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 DDRGK1Q96HY6 314 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 FGD4Q96M96 766 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 HIPK3Q9H422 1215 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 UMODL1Q5DID0 1318 aa16.18■□□□□ 0.18
CCDC59-202ENST00000547758 RABGGTBP53611 331 aa16.17■□□□□ 0.18
CCDC59-202ENST00000547758 NKX3-2P78367 333 aa16.17■□□□□ 0.18
CCDC59-202ENST00000547758 TFF2Q03403 129 aa16.17■□□□□ 0.18
CCDC59-202ENST00000547758 AAK1Q2M2I8 961 aa16.17■□□□□ 0.18
CCDC59-202ENST00000547758 HSP90AB4PQ58FF6 505 aa16.17■□□□□ 0.18
CCDC59-202ENST00000547758 CPXCR1Q8N123 301 aa16.17■□□□□ 0.18
CCDC59-202ENST00000547758 ANKRD35Q8N283 1001 aa16.17■□□□□ 0.18
CCDC59-202ENST00000547758 PRPF38AQ8NAV1 312 aaKnown RBP16.17■□□□□ 0.18
CCDC59-202ENST00000547758 SLC43A3Q8NBI5 491 aa16.17■□□□□ 0.18
CCDC59-202ENST00000547758 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.17■□□□□ 0.18
CCDC59-202ENST00000547758 SCUBE2Q9NQ36 999 aa16.17■□□□□ 0.18
CCDC59-202ENST00000547758 PLSCR2Q9NRY7 297 aa16.17■□□□□ 0.18
CCDC59-202ENST00000547758 ZBED9Q6R2W3 1325 aa16.17■□□□□ 0.18
CCDC59-202ENST00000547758 BRWD1Q9NSI6 2320 aa16.16■□□□□ 0.18
CCDC59-202ENST00000547758 POTEMA6NI47 508 aa16.16■□□□□ 0.18
CCDC59-202ENST00000547758 ZBED4O75132 1171 aa16.16■□□□□ 0.18
CCDC59-202ENST00000547758 NDUFB10O96000 172 aa16.16■□□□□ 0.18
CCDC59-202ENST00000547758 RLBP1P12271 317 aa16.16■□□□□ 0.18
CCDC59-202ENST00000547758 BEX3Q00994 111 aa16.16■□□□□ 0.18
CCDC59-202ENST00000547758 CCDC144CPQ8IYA2 1237 aa16.16■□□□□ 0.18
CCDC59-202ENST00000547758 CLASRPQ8N2M8 674 aaKnown RBP16.16■□□□□ 0.18
CCDC59-202ENST00000547758 KATNBL1Q9H079 304 aa16.16■□□□□ 0.18
CCDC59-202ENST00000547758 PAG1Q9NWQ8 432 aa16.16■□□□□ 0.18
CCDC59-202ENST00000547758 CTDP1Q9Y5B0 961 aaPredicted RBP16.16■□□□□ 0.18
CCDC59-202ENST00000547758 F5H6K3 240 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 CABYRO75952 493 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 MYOGP15173 224 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 KCNQ1P51787 676 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 CCL23P55773 120 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 KLRC3Q07444 240 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 CTR9Q6PD62 1173 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 CXCL17Q6UXB2 119 aa16.15■□□□□ 0.18
CCDC59-202ENST00000547758 NOC4LQ9BVI4 516 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms