RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 CEBPZQ03701 1054 aaKnown RBP18.79■□□□□ 0.6
BRF1-208ENST00000546997 SSRP1Q08945 709 aaKnown RBP18.79■□□□□ 0.6
BRF1-208ENST00000546997 DCAF15Q66K64 600 aa18.79■□□□□ 0.6
BRF1-208ENST00000546997 ZC3H15Q8WU90 426 aaKnown RBP18.79■□□□□ 0.6
BRF1-208ENST00000546997 CPVLQ9H3G5 476 aa18.79■□□□□ 0.6
BRF1-208ENST00000546997 PARP1P09874 1014 aaKnown RBP18.79■□□□□ 0.6
BRF1-208ENST00000546997 SNHG28P0DPA3 235 aa18.79■□□□□ 0.6
BRF1-208ENST00000546997 ZNF165P49910 485 aa18.79■□□□□ 0.6
BRF1-208ENST00000546997 LRMPQ12912 555 aa18.79■□□□□ 0.6
BRF1-208ENST00000546997 LRRC8AQ8IWT6 810 aa18.79■□□□□ 0.6
BRF1-208ENST00000546997 ACER1Q8TDN7 264 aa18.79■□□□□ 0.6
BRF1-208ENST00000546997 CACTINQ8WUQ7 758 aaKnown RBP18.79■□□□□ 0.6
BRF1-208ENST00000546997 FTOQ9C0B1 505 aaKnown RBP eCLIP18.79■□□□□ 0.6
BRF1-208ENST00000546997 FRMPD2Q68DX3 1309 aaPredicted RBP18.79■□□□□ 0.6
BRF1-208ENST00000546997 PHIPQ8WWQ0 1821 aa18.78■□□□□ 0.6
BRF1-208ENST00000546997 CTAGE5O15320 804 aa18.78■□□□□ 0.6
BRF1-208ENST00000546997 ASNSP08243 561 aa18.78■□□□□ 0.6
BRF1-208ENST00000546997 TRIM22Q8IYM9 498 aa18.78■□□□□ 0.6
BRF1-208ENST00000546997 TIGD1Q96MW7 591 aa18.78■□□□□ 0.6
BRF1-208ENST00000546997 RNF26Q9BY78 433 aaPredicted RBP18.78■□□□□ 0.6
BRF1-208ENST00000546997 ZNF341Q9BYN7 854 aa18.78■□□□□ 0.6
BRF1-208ENST00000546997 GLIS2Q9BZE0 524 aaPredicted RBP18.78■□□□□ 0.6
BRF1-208ENST00000546997 DACT1Q9NYF0 836 aa18.78■□□□□ 0.6
BRF1-208ENST00000546997 CYTH3O43739 400 aa18.77■□□□□ 0.6
BRF1-208ENST00000546997 PTPN14Q15678 1187 aa18.77■□□□□ 0.6
BRF1-208ENST00000546997 PNMA8AQ86V59 439 aaPredicted RBP18.77■□□□□ 0.6
BRF1-208ENST00000546997 HOOK2Q96ED9 719 aa18.77■□□□□ 0.6
BRF1-208ENST00000546997 WRNIP1Q96S55 665 aa18.77■□□□□ 0.6
BRF1-208ENST00000546997 ALG1Q9BT22 464 aa18.77■□□□□ 0.6
BRF1-208ENST00000546997 KLRF2D3W0D1 207 aa18.77■□□□□ 0.59
BRF1-208ENST00000546997 RAD21O60216 631 aa18.77■□□□□ 0.59
BRF1-208ENST00000546997 CTNND1O60716 968 aaKnown RBP18.77■□□□□ 0.59
BRF1-208ENST00000546997 PRKG1Q13976 671 aa18.77■□□□□ 0.59
BRF1-208ENST00000546997 SUPT20HL1Q3ZLR7 823 aa18.77■□□□□ 0.59
BRF1-208ENST00000546997 BICD2Q8TD16 824 aa18.77■□□□□ 0.59
BRF1-208ENST00000546997 ZKSCAN4Q969J2 545 aaPredicted RBP18.77■□□□□ 0.59
BRF1-208ENST00000546997 TSPYL1Q9H0U9 437 aa18.77■□□□□ 0.59
BRF1-208ENST00000546997 ZNF112Q9UJU3 913 aa18.77■□□□□ 0.59
BRF1-208ENST00000546997 V9GY48 417 aaPredicted RBP18.77■□□□□ 0.59
BRF1-208ENST00000546997 PKN1Q16512 942 aa18.76■□□□□ 0.59
BRF1-208ENST00000546997 BRAPQ7Z569 592 aa18.76■□□□□ 0.59
BRF1-208ENST00000546997 NRBP1Q9UHY1 535 aa18.76■□□□□ 0.59
BRF1-208ENST00000546997 PRPF3O43395 683 aaKnown RBP18.75■□□□□ 0.59
BRF1-208ENST00000546997 NR1I2O75469 434 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 DEXIO95424 95 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 KIF23Q02241 960 aaPredicted RBP18.75■□□□□ 0.59
BRF1-208ENST00000546997 ZNF543Q08ER8 600 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 KMT5BQ4FZB7 885 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 KLRG1Q96E93 195 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 RRAGCQ9HB90 399 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 RTEL1Q9NZ71 1219 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 F5H6K3 240 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 SLU7O95391 586 aaKnown RBP18.75■□□□□ 0.59
BRF1-208ENST00000546997 NDUFB10O96000 172 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 KCNJ6P48051 423 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 KLRC3Q07444 240 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 BMS1Q14692 1282 aaKnown RBP18.75■□□□□ 0.59
BRF1-208ENST00000546997 ASPRV1Q53RT3 343 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 KIAA1755Q5JYT7 1200 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 SLFN13Q68D06 897 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 KCTD1Q719H9 257 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 GMCL1P1Q8NEA9 526 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 SHISA4Q96DD7 197 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 CDCA5Q96FF9 252 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 ARHGEF10LQ9HCE6 1279 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 GPCPD1Q9NPB8 672 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 TMX2Q9Y320 296 aa18.75■□□□□ 0.59
BRF1-208ENST00000546997 KIF28PB7ZC32 967 aa18.74■□□□□ 0.59
BRF1-208ENST00000546997 VEGFAP15692 232 aaPredicted RBP18.74■□□□□ 0.59
BRF1-208ENST00000546997 GNAQP50148 359 aa18.74■□□□□ 0.59
BRF1-208ENST00000546997 GSDMDP57764 484 aa18.74■□□□□ 0.59
BRF1-208ENST00000546997 CAMK4Q16566 473 aa18.74■□□□□ 0.59
BRF1-208ENST00000546997 CCDC96Q2M329 555 aa18.74■□□□□ 0.59
BRF1-208ENST00000546997 SPICE1Q8N0Z3 855 aa18.74■□□□□ 0.59
BRF1-208ENST00000546997 NUP88Q99567 741 aaPredicted RBP18.74■□□□□ 0.59
BRF1-208ENST00000546997 UBA5Q9GZZ9 404 aa18.74■□□□□ 0.59
BRF1-208ENST00000546997 GOLGA6L19H0YKK7 550 aa18.73■□□□□ 0.59
BRF1-208ENST00000546997 USP2O75604 605 aaPredicted RBP18.73■□□□□ 0.59
BRF1-208ENST00000546997 SLC1A4P43007 532 aa18.73■□□□□ 0.59
BRF1-208ENST00000546997 AKAP17AQ02040 695 aaKnown RBP18.73■□□□□ 0.59
BRF1-208ENST00000546997 IQCB1Q15051 598 aa18.73■□□□□ 0.59
BRF1-208ENST00000546997 MYSM1Q5VVJ2 828 aa18.73■□□□□ 0.59
BRF1-208ENST00000546997 KRT40Q6A162 431 aa18.73■□□□□ 0.59
BRF1-208ENST00000546997 TTBK2Q6IQ55 1244 aa18.73■□□□□ 0.59
BRF1-208ENST00000546997 SCYL3Q8IZE3 742 aa18.73■□□□□ 0.59
BRF1-208ENST00000546997 ZNF526Q8TF50 670 aaPredicted RBP18.73■□□□□ 0.59
BRF1-208ENST00000546997 ZYXQ15942 572 aaKnown RBP18.73■□□□□ 0.59
BRF1-208ENST00000546997 MAP1SQ66K74 1059 aaPredicted RBP18.73■□□□□ 0.59
BRF1-208ENST00000546997 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.73■□□□□ 0.59
BRF1-208ENST00000546997 LZTS2Q9BRK4 669 aa18.73■□□□□ 0.59
BRF1-208ENST00000546997 SPZ1Q9BXG8 430 aa18.73■□□□□ 0.59
BRF1-208ENST00000546997 NMRK2Q9NPI5 230 aa18.73■□□□□ 0.59
BRF1-208ENST00000546997 POLR3EQ9NVU0 708 aa18.73■□□□□ 0.59
BRF1-208ENST00000546997 ZNF215Q9UL58 517 aaPredicted RBP18.73■□□□□ 0.59
BRF1-208ENST00000546997 CCAR1Q8IX12 1150 aaKnown RBP18.72■□□□□ 0.59
BRF1-208ENST00000546997 LINC00301Q8NCQ3 95 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 DCAF4Q8WV16 495 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 WASF1Q92558 559 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 L2HGDHQ9H9P8 463 aa18.72■□□□□ 0.59
BRF1-208ENST00000546997 IMPACTQ9P2X3 320 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms