RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 WDR19Q8NEZ3 1342 aa18■□□□□ 0.47
SSH1-204ENST00000546697 PGK2P07205 417 aa18■□□□□ 0.47
SSH1-204ENST00000546697 CPXCR1Q8N123 301 aa18■□□□□ 0.47
SSH1-204ENST00000546697 FAM133AQ8N9E0 248 aa18■□□□□ 0.47
SSH1-204ENST00000546697 PNMA1Q8ND90 353 aa18■□□□□ 0.47
SSH1-204ENST00000546697 ESYT1Q9BSJ8 1104 aa18■□□□□ 0.47
SSH1-204ENST00000546697 LSG1Q9H089 658 aaKnown RBP18■□□□□ 0.47
SSH1-204ENST00000546697 ACAD9Q9H845 621 aa18■□□□□ 0.47
SSH1-204ENST00000546697 RANBP2P49792 3224 aaKnown RBP18■□□□□ 0.47
SSH1-204ENST00000546697 TNKSO95271 1327 aa17.99■□□□□ 0.47
SSH1-204ENST00000546697 SYDE2Q5VT97 1194 aa17.99■□□□□ 0.47
SSH1-204ENST00000546697 ERICH6BQ5W0A0 696 aa17.99■□□□□ 0.47
SSH1-204ENST00000546697 TTBK2Q6IQ55 1244 aa17.99■□□□□ 0.47
SSH1-204ENST00000546697 SAMD1Q6SPF0 538 aaPredicted RBP17.99■□□□□ 0.47
SSH1-204ENST00000546697 PAWRQ96IZ0 340 aaKnown RBP17.99■□□□□ 0.47
SSH1-204ENST00000546697 AGBL1Q96MI9 1066 aa17.99■□□□□ 0.47
SSH1-204ENST00000546697 A1CFQ9NQ94 594 aaKnown RBP17.99■□□□□ 0.47
SSH1-204ENST00000546697 CEP290O15078 2479 aa17.99■□□□□ 0.47
SSH1-204ENST00000546697 PFASO15067 1338 aa17.98■□□□□ 0.47
SSH1-204ENST00000546697 LOC102724159A0A0B4J2E5 919 aa17.98■□□□□ 0.47
SSH1-204ENST00000546697 ZNF865P0CJ78 1059 aaPredicted RBP17.98■□□□□ 0.47
SSH1-204ENST00000546697 PWP2Q15269 919 aaKnown RBP17.98■□□□□ 0.47
SSH1-204ENST00000546697 ASPRV1Q53RT3 343 aa17.98■□□□□ 0.47
SSH1-204ENST00000546697 DIS3LQ8TF46 1054 aaKnown RBP17.98■□□□□ 0.47
SSH1-204ENST00000546697 RNF146Q9NTX7 359 aa17.98■□□□□ 0.47
SSH1-204ENST00000546697 CTDP1Q9Y5B0 961 aaPredicted RBP17.98■□□□□ 0.47
SSH1-204ENST00000546697 ALPK3Q96L96 1907 aa17.98■□□□□ 0.47
SSH1-204ENST00000546697 E7EWF7 191 aa17.97■□□□□ 0.47
SSH1-204ENST00000546697 SNAI1O95863 264 aaPredicted RBP17.97■□□□□ 0.47
SSH1-204ENST00000546697 CCDC96Q2M329 555 aa17.97■□□□□ 0.47
SSH1-204ENST00000546697 STOX1Q6ZVD7 989 aa17.97■□□□□ 0.47
SSH1-204ENST00000546697 CYB5R4Q7L1T6 521 aa17.97■□□□□ 0.47
SSH1-204ENST00000546697 MORC4Q8TE76 937 aa17.97■□□□□ 0.47
SSH1-204ENST00000546697 DDX11Q96FC9 970 aa17.97■□□□□ 0.47
SSH1-204ENST00000546697 ZKSCAN3Q9BRR0 538 aa17.97■□□□□ 0.47
SSH1-204ENST00000546697 KATNBL1Q9H079 304 aa17.97■□□□□ 0.47
SSH1-204ENST00000546697 TAF6LQ9Y6J9 622 aa17.97■□□□□ 0.47
SSH1-204ENST00000546697 DNM1LO00429 736 aa17.96■□□□□ 0.47
SSH1-204ENST00000546697 NKX3-2P78367 333 aa17.96■□□□□ 0.47
SSH1-204ENST00000546697 TRDNQ13061 729 aa17.96■□□□□ 0.47
SSH1-204ENST00000546697 IKQ13123 557 aaPredicted RBP17.96■□□□□ 0.47
SSH1-204ENST00000546697 NECTIN1Q15223 517 aa17.96■□□□□ 0.47
SSH1-204ENST00000546697 ANKRD35Q8N283 1001 aa17.96■□□□□ 0.47
SSH1-204ENST00000546697 RGS22Q8NE09 1264 aa17.96■□□□□ 0.47
SSH1-204ENST00000546697 TRERF1Q96PN7 1200 aa17.96■□□□□ 0.47
SSH1-204ENST00000546697 UBAC1Q9BSL1 405 aa17.96■□□□□ 0.47
SSH1-204ENST00000546697 C11orf49Q9H6J7 331 aa17.96■□□□□ 0.47
SSH1-204ENST00000546697 KAT14Q9H8E8 782 aa17.96■□□□□ 0.47
SSH1-204ENST00000546697 CYP39A1Q9NYL5 469 aa17.96■□□□□ 0.47
SSH1-204ENST00000546697 RBM8AQ9Y5S9 174 aaKnown RBP17.96■□□□□ 0.47
SSH1-204ENST00000546697 SLC16A2P36021 539 aa17.95■□□□□ 0.46
SSH1-204ENST00000546697 MB21D2Q8IYB1 491 aaPredicted RBP17.95■□□□□ 0.46
SSH1-204ENST00000546697 NCOA7Q8NI08 942 aa17.95■□□□□ 0.46
SSH1-204ENST00000546697 MTMR8Q96EF0 704 aa17.95■□□□□ 0.46
SSH1-204ENST00000546697 CCDC136Q96JN2 1154 aa17.95■□□□□ 0.46
SSH1-204ENST00000546697 PRO3102Q9H379 93 aa17.95■□□□□ 0.46
SSH1-204ENST00000546697 LCTP09848 1927 aa17.95■□□□□ 0.46
SSH1-204ENST00000546697 ASTN1O14525 1302 aa17.95■□□□□ 0.46
SSH1-204ENST00000546697 FRMPD2Q68DX3 1309 aaPredicted RBP17.95■□□□□ 0.46
SSH1-204ENST00000546697 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
SSH1-204ENST00000546697 GHRHRQ02643 423 aa17.94■□□□□ 0.46
SSH1-204ENST00000546697 TSGA10IPQ3SY00 556 aa17.94■□□□□ 0.46
SSH1-204ENST00000546697 MUM1L1Q5H9M0 696 aa17.94■□□□□ 0.46
SSH1-204ENST00000546697 IFIT1BQ5T764 474 aaKnown RBP17.94■□□□□ 0.46
SSH1-204ENST00000546697 ARRDC4Q8NCT1 418 aa17.94■□□□□ 0.46
SSH1-204ENST00000546697 CLEC4DQ8WXI8 215 aa17.94■□□□□ 0.46
SSH1-204ENST00000546697 MAP3K14Q99558 947 aa17.94■□□□□ 0.46
SSH1-204ENST00000546697 ABHD16BQ9H3Z7 469 aa17.94■□□□□ 0.46
SSH1-204ENST00000546697 GPCPD1Q9NPB8 672 aa17.94■□□□□ 0.46
SSH1-204ENST00000546697 CCPG1Q9ULG6 757 aa17.94■□□□□ 0.46
SSH1-204ENST00000546697 PALM3A6NDB9 673 aaPredicted RBP17.93■□□□□ 0.46
SSH1-204ENST00000546697 SOWAHBA6NEL2 793 aa17.93■□□□□ 0.46
SSH1-204ENST00000546697 ALAS1P13196 640 aa17.93■□□□□ 0.46
SSH1-204ENST00000546697 AKR1A1P14550 325 aa17.93■□□□□ 0.46
SSH1-204ENST00000546697 TAL1P17542 331 aaPredicted RBP17.93■□□□□ 0.46
SSH1-204ENST00000546697 ANTXR2P58335 489 aa17.93■□□□□ 0.46
SSH1-204ENST00000546697 TROAPQ12815 778 aa17.93■□□□□ 0.46
SSH1-204ENST00000546697 PRAMEF19Q5SWL8 479 aa17.93■□□□□ 0.46
SSH1-204ENST00000546697 C1orf53Q5VUE5 145 aa17.93■□□□□ 0.46
SSH1-204ENST00000546697 SKAP1Q86WV1 359 aa17.93■□□□□ 0.46
SSH1-204ENST00000546697 IGDCC4Q8TDY8 1250 aa17.93■□□□□ 0.46
SSH1-204ENST00000546697 CNPY2Q9Y2B0 182 aa17.93■□□□□ 0.46
SSH1-204ENST00000546697 NR2E3Q9Y5X4 410 aa17.93■□□□□ 0.46
SSH1-204ENST00000546697 LRRC37A2A6NM11 1700 aa17.92■□□□□ 0.46
SSH1-204ENST00000546697 POTEB2H3BUK9 544 aa17.92■□□□□ 0.46
SSH1-204ENST00000546697 CNTN2Q02246 1040 aa17.92■□□□□ 0.46
SSH1-204ENST00000546697 SNX17Q15036 470 aa17.92■□□□□ 0.46
SSH1-204ENST00000546697 CCDC174Q6PII3 467 aa17.92■□□□□ 0.46
SSH1-204ENST00000546697 KIAA1211Q6ZU35 1233 aa17.92■□□□□ 0.46
SSH1-204ENST00000546697 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.92■□□□□ 0.46
SSH1-204ENST00000546697 MAD2L2Q9UI95 211 aa17.92■□□□□ 0.46
SSH1-204ENST00000546697 ASB14A6NK59 587 aa17.91■□□□□ 0.46
SSH1-204ENST00000546697 H0YGN5 161 aa17.91■□□□□ 0.46
SSH1-204ENST00000546697 SLC27A2O14975 620 aa17.91■□□□□ 0.46
SSH1-204ENST00000546697 ADAMTS4O75173 837 aa17.91■□□□□ 0.46
SSH1-204ENST00000546697 CDC45O75419 566 aa17.91■□□□□ 0.46
SSH1-204ENST00000546697 PARP1P09874 1014 aaKnown RBP17.91■□□□□ 0.46
SSH1-204ENST00000546697 CST5P28325 142 aaPredicted RBP17.91■□□□□ 0.46
SSH1-204ENST00000546697 CNGA1P29973 690 aa17.91■□□□□ 0.46
SSH1-204ENST00000546697 SNAP25P60880 206 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms