RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 KCTD1Q719H9 257 aa22.14■■□□□ 1.14
CHERP-204ENST00000546538 RNF180Q86T96 592 aa22.14■■□□□ 1.14
CHERP-204ENST00000546538 ZNF589Q86UQ0 364 aaPredicted RBP22.14■■□□□ 1.14
CHERP-204ENST00000546538 CHST13Q8NET6 341 aa22.14■■□□□ 1.14
CHERP-204ENST00000546538 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.14■■□□□ 1.14
CHERP-204ENST00000546538 ZHX1Q9UKY1 873 aaPredicted RBP22.14■■□□□ 1.14
CHERP-204ENST00000546538 DDX49Q9Y6V7 483 aaKnown RBP22.14■■□□□ 1.14
CHERP-204ENST00000546538 ASTN1O14525 1302 aa22.14■■□□□ 1.14
CHERP-204ENST00000546538 LCTP09848 1927 aa22.14■■□□□ 1.13
CHERP-204ENST00000546538 POTEB2H3BUK9 544 aa22.14■■□□□ 1.13
CHERP-204ENST00000546538 SLC3A2P08195 630 aaKnown RBP22.14■■□□□ 1.13
CHERP-204ENST00000546538 STAT2P52630 851 aa22.14■■□□□ 1.13
CHERP-204ENST00000546538 ANKRD35Q8N283 1001 aa22.14■■□□□ 1.13
CHERP-204ENST00000546538 FAM133AQ8N9E0 248 aa22.14■■□□□ 1.13
CHERP-204ENST00000546538 PRKAG2Q9UGJ0 569 aa22.14■■□□□ 1.13
CHERP-204ENST00000546538 STX8Q9UNK0 236 aa22.14■■□□□ 1.13
CHERP-204ENST00000546538 LRRC37A2A6NM11 1700 aa22.13■■□□□ 1.13
CHERP-204ENST00000546538 SLC1A4P43007 532 aa22.13■■□□□ 1.13
CHERP-204ENST00000546538 ACVR2BQ13705 512 aa22.13■■□□□ 1.13
CHERP-204ENST00000546538 ALX1Q15699 326 aa22.13■■□□□ 1.13
CHERP-204ENST00000546538 STAG1Q8WVM7 1258 aa22.13■■□□□ 1.13
CHERP-204ENST00000546538 A1CFQ9NQ94 594 aaKnown RBP22.13■■□□□ 1.13
CHERP-204ENST00000546538 HELLSQ9NRZ9 838 aa22.13■■□□□ 1.13
CHERP-204ENST00000546538 FAM184BQ9ULE4 1060 aa22.13■■□□□ 1.13
CHERP-204ENST00000546538 PRUNE2Q8WUY3 3088 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 SOWAHBA6NEL2 793 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 TSPY2A6NKD2 308 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 CTAGE5O15320 804 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 ORC4O43929 436 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 PLA2G6O60733 806 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 FGAP02671 866 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 ACLYP53396 1101 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 EPHB4P54760 987 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 ARMCX2Q7L311 632 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 CCDC144CPQ8IYA2 1237 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 LNPKQ9C0E8 428 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 FBXO40Q9UH90 709 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 VCANP13611 3396 aa22.12■■□□□ 1.13
CHERP-204ENST00000546538 PTGS1P23219 599 aa22.11■■□□□ 1.13
CHERP-204ENST00000546538 NMIQ13287 307 aaPredicted RBP22.11■■□□□ 1.13
CHERP-204ENST00000546538 CCDC144BQ3MJ40 725 aa22.11■■□□□ 1.13
CHERP-204ENST00000546538 RCSD1Q6JBY9 416 aa22.11■■□□□ 1.13
CHERP-204ENST00000546538 GUCD1Q96NT3 240 aa22.11■■□□□ 1.13
CHERP-204ENST00000546538 TSEN34Q9BSV6 310 aaKnown RBP22.11■■□□□ 1.13
CHERP-204ENST00000546538 RNF146Q9NTX7 359 aa22.11■■□□□ 1.13
CHERP-204ENST00000546538 PRR12Q9ULL5 1215 aa22.11■■□□□ 1.13
CHERP-204ENST00000546538 CTDP1Q9Y5B0 961 aaPredicted RBP22.11■■□□□ 1.13
CHERP-204ENST00000546538 RANBP6O60518 1105 aaKnown RBP22.1■■□□□ 1.13
CHERP-204ENST00000546538 PQBP1O60828 265 aaKnown RBP22.1■■□□□ 1.13
CHERP-204ENST00000546538 DUSP11O75319 330 aaKnown RBP22.1■■□□□ 1.13
CHERP-204ENST00000546538 KCNA10Q16322 511 aa22.1■■□□□ 1.13
CHERP-204ENST00000546538 MUM1L1Q5H9M0 696 aa22.1■■□□□ 1.13
CHERP-204ENST00000546538 FAM160B2Q86V87 743 aa22.1■■□□□ 1.13
CHERP-204ENST00000546538 SMC5Q8IY18 1101 aa22.1■■□□□ 1.13
CHERP-204ENST00000546538 UPF3AQ9H1J1 476 aaKnown RBP22.1■■□□□ 1.13
CHERP-204ENST00000546538 ABHD16BQ9H3Z7 469 aa22.1■■□□□ 1.13
CHERP-204ENST00000546538 ACAD9Q9H845 621 aa22.1■■□□□ 1.13
CHERP-204ENST00000546538 CUL9Q8IWT3 2517 aa22.09■■□□□ 1.13
CHERP-204ENST00000546538 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.09■■□□□ 1.13
CHERP-204ENST00000546538 KIAA0355O15063 1070 aa22.09■■□□□ 1.13
CHERP-204ENST00000546538 CLTBP09497 229 aa22.09■■□□□ 1.13
CHERP-204ENST00000546538 FDX1P10109 184 aa22.09■■□□□ 1.13
CHERP-204ENST00000546538 HSPD1P10809 573 aaKnown RBP22.09■■□□□ 1.13
CHERP-204ENST00000546538 CST5P28325 142 aaPredicted RBP22.09■■□□□ 1.13
CHERP-204ENST00000546538 FAAP100Q0VG06 881 aa22.09■■□□□ 1.13
CHERP-204ENST00000546538 MCMDC2Q4G0Z9 681 aa22.09■■□□□ 1.13
CHERP-204ENST00000546538 TTBK2Q6IQ55 1244 aa22.09■■□□□ 1.13
CHERP-204ENST00000546538 CCDC174Q6PII3 467 aa22.09■■□□□ 1.13
CHERP-204ENST00000546538 ANKRD33Q7Z3H0 272 aa22.09■■□□□ 1.13
CHERP-204ENST00000546538 CHURC1Q8WUH1 139 aa22.09■■□□□ 1.13
CHERP-204ENST00000546538 PURBQ96QR8 312 aaKnown RBP22.09■■□□□ 1.13
CHERP-204ENST00000546538 ISY1Q9ULR0 285 aaKnown RBP22.09■■□□□ 1.13
CHERP-204ENST00000546538 STXBP5LQ9Y2K9 1186 aa22.09■■□□□ 1.13
CHERP-204ENST00000546538 IGHDP01880 384 aa22.08■■□□□ 1.13
CHERP-204ENST00000546538 TRERF1Q96PN7 1200 aa22.08■■□□□ 1.13
CHERP-204ENST00000546538 MTMR7Q9Y216 660 aa22.08■■□□□ 1.13
CHERP-204ENST00000546538 ALAS1P13196 640 aa22.07■■□□□ 1.12
CHERP-204ENST00000546538 GJA9P57773 515 aa22.07■■□□□ 1.12
CHERP-204ENST00000546538 IKQ13123 557 aaPredicted RBP22.07■■□□□ 1.12
CHERP-204ENST00000546538 TMEM63BQ5T3F8 832 aa22.07■■□□□ 1.12
CHERP-204ENST00000546538 FAM109BQ6ICB4 259 aaPredicted RBP22.07■■□□□ 1.12
CHERP-204ENST00000546538 SLC17A8Q8NDX2 589 aa22.07■■□□□ 1.12
CHERP-204ENST00000546538 STARD7Q9NQZ5 370 aa22.07■■□□□ 1.12
CHERP-204ENST00000546538 ZMYM6O95789 1325 aa22.07■■□□□ 1.12
CHERP-204ENST00000546538 MOXD2PA6NHM9 499 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 SLC16A2P36021 539 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 HAND2P61296 217 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 TBC1D10CQ8IV04 446 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 FAM161BQ96MY7 647 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 TMEM47Q9BQJ4 181 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 ASGR1P07306 291 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 C6orf222P0C671 652 aaPredicted RBP22.06■■□□□ 1.12
CHERP-204ENST00000546538 CDK7P50613 346 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 NKX3-2P78367 333 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 B4GALNT3Q6L9W6 998 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 TOX2Q96NM4 488 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 RANBP17Q9H2T7 1088 aaKnown RBP22.06■■□□□ 1.12
CHERP-204ENST00000546538 CYP39A1Q9NYL5 469 aa22.06■■□□□ 1.12
CHERP-204ENST00000546538 ZBTB47Q9UFB7 747 aaPredicted RBP22.06■■□□□ 1.12
CHERP-204ENST00000546538 TBX21Q9UL17 535 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms