RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SCAF8Q9UPN6 1271 aaKnown RBP7.59□□□□□ -1.19
PRKDC-211ENST00000546304 PPP2R3BQ9Y5P8 575 aa7.59□□□□□ -1.19
PRKDC-211ENST00000546304 MAFBQ9Y5Q3 323 aaPredicted RBP7.59□□□□□ -1.19
PRKDC-211ENST00000546304 ATRNL1Q5VV63 1379 aa7.59□□□□□ -1.2
PRKDC-211ENST00000546304 CCDC171Q6TFL3 1326 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 PALM3A6NDB9 673 aaPredicted RBP7.58□□□□□ -1.2
PRKDC-211ENST00000546304 TCP10L2B9ZVM9 353 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 PLA2G4AP47712 749 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 EPHA4P54764 986 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 FOXK2Q01167 660 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 PICALMQ13492 652 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 FAM83AQ86UY5 434 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 PGBD3Q8N328 593 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
PRKDC-211ENST00000546304 SEC62Q99442 399 aaKnown RBP7.58□□□□□ -1.2
PRKDC-211ENST00000546304 IDI2Q9BXS1 227 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 CRNKL1Q9BZJ0 848 aaKnown RBP7.58□□□□□ -1.2
PRKDC-211ENST00000546304 PPP1R12CQ9BZL4 782 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 TMEM39BQ9GZU3 492 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 OSBPL5Q9H0X9 879 aaPredicted RBP7.58□□□□□ -1.2
PRKDC-211ENST00000546304 DEFB129Q9H1M3 183 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 CRISPLD1Q9H336 500 aa7.58□□□□□ -1.2
PRKDC-211ENST00000546304 DDX4Q9NQI0 724 aaKnown RBP7.58□□□□□ -1.2
PRKDC-211ENST00000546304 DNAAF2Q9NVR5 837 aaKnown RBP7.58□□□□□ -1.2
PRKDC-211ENST00000546304 M0R2N6 131 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 GPR25O00155 361 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 TRAF5O00463 557 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 ENTPD3O75355 529 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 CDC45O75419 566 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 GNAT2P19087 354 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 ATP4AP20648 1035 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 CHMLP26374 656 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 USP5P45974 858 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 TCP10Q12799 353 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 FSTL1Q12841 308 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 UBAP2LQ14157 1087 aaKnown RBP7.57□□□□□ -1.2
PRKDC-211ENST00000546304 RASA3Q14644 834 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 CWC27Q6UX04 472 aaKnown RBP7.57□□□□□ -1.2
PRKDC-211ENST00000546304 CCDC129Q6ZRS4 1044 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 CDC37L1Q7L3B6 337 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 ZNF589Q86UQ0 364 aaPredicted RBP7.57□□□□□ -1.2
PRKDC-211ENST00000546304 MAPKAPK5Q8IW41 473 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 SIX5Q8N196 739 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 TPCN2Q8NHX9 752 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 TGFBRAP1Q8WUH2 860 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 SDR42E1Q8WUS8 393 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 CDCA5Q96FF9 252 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 STRBPQ96SI9 672 aaKnown RBP7.57□□□□□ -1.2
PRKDC-211ENST00000546304 CFHR5Q9BXR6 569 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 IL25Q9H293 177 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 EPB41L4AQ9HCS5 686 aaPredicted RBP7.57□□□□□ -1.2
PRKDC-211ENST00000546304 HELLSQ9NRZ9 838 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 KIAA1024Q9UPX6 916 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 USP3Q9Y6I4 520 aa7.57□□□□□ -1.2
PRKDC-211ENST00000546304 GREB1LQ9C091 1923 aaPredicted RBP7.56□□□□□ -1.2
PRKDC-211ENST00000546304 PASKQ96RG2 1323 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 MFAP1P55081 439 aaKnown RBP7.56□□□□□ -1.2
PRKDC-211ENST00000546304 MCMDC2Q4G0Z9 681 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 EFHC2Q5JST6 749 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 CASC1Q6TDU7 716 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 USP48Q86UV5 1035 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 FAM151AQ8WW52 585 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 RUFY2Q8WXA3 655 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 TEPSINQ96N21 525 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 CSRNP1Q96S65 589 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 RUBCNLQ9H714 662 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 ZNF408Q9H9D4 720 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 DCP1AQ9NPI6 582 aaPredicted RBP7.56□□□□□ -1.2
PRKDC-211ENST00000546304 ZDHHC3Q9NYG2 299 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 SLC4A4Q9Y6R1 1079 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 PTPRFP10586 1907 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 ROBO3Q96MS0 1386 aa7.56□□□□□ -1.2
PRKDC-211ENST00000546304 ZMYM6O95789 1325 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 PHIPQ8WWQ0 1821 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 FOXP2O15409 715 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 SGSM2O43147 1006 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 PRKAB2O43741 272 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 DKK1O94907 266 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 HLA-DOAP06340 250 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 NF2P35240 595 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 TDO2P48775 406 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 SLC4A8Q2Y0W8 1093 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 VPS53Q5VIR6 699 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 PRAMEF18Q5VWM3 479 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 ZNF385CQ66K41 422 aaPredicted RBP7.55□□□□□ -1.2
PRKDC-211ENST00000546304 DLK2Q6UY11 383 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 ZSCAN29Q8IWY8 852 aaPredicted RBP7.55□□□□□ -1.2
PRKDC-211ENST00000546304 ZFPM1Q8IX07 1006 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 HOOK2Q96ED9 719 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 ATP8A2Q9NTI2 1148 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 ARPP21Q9UBL0 812 aaPredicted RBP7.55□□□□□ -1.2
PRKDC-211ENST00000546304 SAP30BPQ9UHR5 308 aaKnown RBP7.55□□□□□ -1.2
PRKDC-211ENST00000546304 THSD7BQ9C0I4 1608 aa7.55□□□□□ -1.2
PRKDC-211ENST00000546304 DDTLA6NHG4 134 aaPredicted RBP7.54□□□□□ -1.2
PRKDC-211ENST00000546304 GSG1L2A8MUP6 293 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 CELF2O95319 508 aaKnown RBP7.54□□□□□ -1.2
PRKDC-211ENST00000546304 APPP05067 770 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 FMR1Q06787 632 aaKnown RBP eCLIP7.54□□□□□ -1.22e-12■■■■□ 23.4
PRKDC-211ENST00000546304 TEAD4Q15561 434 aa7.54□□□□□ -1.2
PRKDC-211ENST00000546304 SUPT20HL1Q3ZLR7 823 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms