RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ADCY3O60266 1144 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 ALAS1P13196 640 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 RGS2P41220 211 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 IRF5Q13568 498 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 MORN1Q5T089 497 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 RUFY3Q7L099 469 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 NBPF11Q86T75 865 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 DPP9Q86TI2 863 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 SGMS1Q86VZ5 419 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 ABHD8Q96I13 439 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 MMP19Q99542 508 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 MAP3K14Q99558 947 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 TM6SF1Q9BZW5 370 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 ZSWIM6Q9HCJ5 1215 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 HOMER2Q9NSB8 354 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 CCPG1Q9ULG6 757 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 ZSWIM8A7E2V4 1837 aa19.59■□□□□ 0.73
LTBR-215ENST00000546296 ZNF536O15090 1300 aa19.58■□□□□ 0.73
LTBR-215ENST00000546296 ICAM1P05362 532 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 GRK4P32298 578 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 ANAPC15P60006 121 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 MAP2K5Q13163 448 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 GRB14Q14449 540 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 KCTD2Q14681 263 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 TKFCQ3LXA3 575 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 RAB11FIP4Q86YS3 637 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 CCDC144CPQ8IYA2 1237 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 CHST13Q8NET6 341 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 FBXO40Q9UH90 709 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 PNMA2Q9UL42 364 aa19.58■□□□□ 0.72
LTBR-215ENST00000546296 A0A0G2JMZ2 1700 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 KLF18A0A0U1RQI7 1052 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 RXRAP19793 462 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 ADORA2AP29274 412 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 GNAQP50148 359 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 MICU3Q86XE3 530 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 ABRAQ8N0Z2 381 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 SLAIN1Q8ND83 568 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 SH3TC2Q8TF17 1288 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 BRF1Q92994 677 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 TRERF1Q96PN7 1200 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 UPF3BQ9BZI7 483 aaKnown RBP19.57■□□□□ 0.72
LTBR-215ENST00000546296 JMJD4Q9H9V9 463 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 RNF146Q9NTX7 359 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 SLC5A4Q9NY91 659 aa19.57■□□□□ 0.72
LTBR-215ENST00000546296 ZBTB43O43298 467 aa19.56■□□□□ 0.72
LTBR-215ENST00000546296 ELNP15502 786 aa19.56■□□□□ 0.72
LTBR-215ENST00000546296 CDC37Q16543 378 aaPredicted RBP19.56■□□□□ 0.72
LTBR-215ENST00000546296 ANKRD35Q8N283 1001 aa19.56■□□□□ 0.72
LTBR-215ENST00000546296 FANCBQ8NB91 859 aa19.56■□□□□ 0.72
LTBR-215ENST00000546296 PXYLP1Q8TE99 480 aa19.56■□□□□ 0.72
LTBR-215ENST00000546296 USP6NLQ92738 828 aa19.56■□□□□ 0.72
LTBR-215ENST00000546296 DDX11Q96FC9 970 aa19.56■□□□□ 0.72
LTBR-215ENST00000546296 LZTS2Q9BRK4 669 aa19.56■□□□□ 0.72
LTBR-215ENST00000546296 ACAD9Q9H845 621 aa19.56■□□□□ 0.72
LTBR-215ENST00000546296 BRPF3Q9ULD4 1205 aa19.56■□□□□ 0.72
LTBR-215ENST00000546296 PARP14Q460N5 1801 aa19.55■□□□□ 0.72
LTBR-215ENST00000546296 CCDC85CA6NKD9 419 aa19.55■□□□□ 0.72
LTBR-215ENST00000546296 MGAMO43451 1857 aa19.55■□□□□ 0.72
LTBR-215ENST00000546296 XRCC5P13010 732 aaKnown RBP19.55■□□□□ 0.72
LTBR-215ENST00000546296 APOBRQ0VD83 1088 aa19.55■□□□□ 0.72
LTBR-215ENST00000546296 APOA5Q6Q788 366 aa19.55■□□□□ 0.72
LTBR-215ENST00000546296 TRMT44Q8IYL2 757 aaKnown RBP19.55■□□□□ 0.72
LTBR-215ENST00000546296 APBA2Q99767 749 aa19.55■□□□□ 0.72
LTBR-215ENST00000546296 UPF2Q9HAU5 1272 aaKnown RBP19.55■□□□□ 0.72
LTBR-215ENST00000546296 PDRG1Q9NUG6 133 aa19.55■□□□□ 0.72
LTBR-215ENST00000546296 MYCP01106 439 aaPredicted RBP19.54■□□□□ 0.72
LTBR-215ENST00000546296 PGK2P07205 417 aa19.54■□□□□ 0.72
LTBR-215ENST00000546296 UBXN2AP68543 259 aa19.54■□□□□ 0.72
LTBR-215ENST00000546296 QRICH1Q2TAL8 776 aa19.54■□□□□ 0.72
LTBR-215ENST00000546296 USH1GQ495M9 461 aa19.54■□□□□ 0.72
LTBR-215ENST00000546296 FBXO11Q86XK2 927 aa19.54■□□□□ 0.72
LTBR-215ENST00000546296 HOMER1Q86YM7 354 aa19.54■□□□□ 0.72
LTBR-215ENST00000546296 GOLGA8AA7E2F4 631 aa19.53■□□□□ 0.72
LTBR-215ENST00000546296 GOLGA8BA8MQT2 603 aa19.53■□□□□ 0.72
LTBR-215ENST00000546296 COBLO75128 1261 aa19.53■□□□□ 0.72
LTBR-215ENST00000546296 TAL1P17542 331 aaPredicted RBP19.53■□□□□ 0.72
LTBR-215ENST00000546296 RTN1Q16799 776 aa19.53■□□□□ 0.72
LTBR-215ENST00000546296 MUM1L1Q5H9M0 696 aa19.53■□□□□ 0.72
LTBR-215ENST00000546296 FBXL16Q8N461 479 aa19.53■□□□□ 0.72
LTBR-215ENST00000546296 PIBF1Q8WXW3 757 aa19.53■□□□□ 0.72
LTBR-215ENST00000546296 ARMC5Q96C12 935 aa19.53■□□□□ 0.72
LTBR-215ENST00000546296 RIOX1Q9H6W3 641 aa19.53■□□□□ 0.72
LTBR-215ENST00000546296 RBM28Q9NW13 759 aaKnown RBP19.53■□□□□ 0.72
LTBR-215ENST00000546296 COL11A1P12107 1806 aaPredicted RBP19.53■□□□□ 0.72
LTBR-215ENST00000546296 ZBTB5O15062 677 aa19.52■□□□□ 0.72
LTBR-215ENST00000546296 PLEKHA8P1O95397 391 aa19.52■□□□□ 0.72
LTBR-215ENST00000546296 HMGCRP04035 888 aa19.52■□□□□ 0.72
LTBR-215ENST00000546296 INHAP05111 366 aa19.52■□□□□ 0.72
LTBR-215ENST00000546296 HOXC6P09630 235 aa19.52■□□□□ 0.72
LTBR-215ENST00000546296 METAP2P50579 478 aaKnown RBP eCLIP19.52■□□□□ 0.72
LTBR-215ENST00000546296 CCL14Q16627 93 aa19.52■□□□□ 0.72
LTBR-215ENST00000546296 NSMFQ6X4W1 530 aa19.52■□□□□ 0.72
LTBR-215ENST00000546296 CMTR1Q8N1G2 835 aaKnown RBP19.52■□□□□ 0.72
LTBR-215ENST00000546296 CCDC82Q8N4S0 544 aa19.52■□□□□ 0.72
LTBR-215ENST00000546296 SRBD1Q8N5C6 995 aaKnown RBP19.52■□□□□ 0.72
LTBR-215ENST00000546296 NPLOC4Q8TAT6 608 aa19.52■□□□□ 0.72
LTBR-215ENST00000546296 RRP36Q96EU6 259 aaKnown RBP19.52■□□□□ 0.72
LTBR-215ENST00000546296 PIGSQ96S52 555 aa19.52■□□□□ 0.72
LTBR-215ENST00000546296 C22orf23Q9BZE7 217 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms