RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 EXOC1Q9NV70 894 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 SNX12Q9UMY4 172 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 MROH5Q6ZUA9 1318 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 SRGNP10124 158 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 INPP5BP32019 993 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 VAV2P52735 878 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 PMS1P54277 932 aaKnown RBP15.87■□□□□ 0.13
SRP54-202ENST00000546080 IL17AQ16552 155 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 ENAHQ8N8S7 591 aaPredicted RBP15.87■□□□□ 0.13
SRP54-202ENST00000546080 PCMTD1Q96MG8 357 aaPredicted RBP15.87■□□□□ 0.13
SRP54-202ENST00000546080 ZSCAN10Q96SZ4 725 aaPredicted RBP15.87■□□□□ 0.13
SRP54-202ENST00000546080 SH3GL2Q99962 352 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 DUSP10Q9Y6W6 482 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 SOS2Q07890 1332 aaPredicted RBP15.87■□□□□ 0.13
SRP54-202ENST00000546080 ARAP2Q8WZ64 1704 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 BCORQ6W2J9 1755 aa15.87■□□□□ 0.13
SRP54-202ENST00000546080 USP8P40818 1118 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 TRAPPC10P48553 1259 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 HSPA2P54652 639 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 ZBED6P86452 979 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 CCDC91Q7Z6B0 441 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 RETREG2Q8NC44 543 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 TRIM58Q8NG06 486 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 DDX17Q92841 729 aaKnown RBP15.86■□□□□ 0.13
SRP54-202ENST00000546080 TTYH3Q9C0H2 523 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 PSMA7O14818 248 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 LONP1P36776 959 aaKnown RBP15.86■□□□□ 0.13
SRP54-202ENST00000546080 EPHB4P54760 987 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 NLRP5P59047 1200 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 CYP27A1Q02318 531 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 SPA17Q15506 151 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 EZH2Q15910 746 aaKnown RBP15.86■□□□□ 0.13
SRP54-202ENST00000546080 HLFQ16534 295 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 CREG2Q8IUH2 290 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 NOC3LQ8WTT2 800 aaKnown RBP15.86■□□□□ 0.13
SRP54-202ENST00000546080 LRRC1Q9BTT6 524 aa15.86■□□□□ 0.13
SRP54-202ENST00000546080 NUTM2BA6NNL0 878 aaPredicted RBP15.85■□□□□ 0.13
SRP54-202ENST00000546080 NUTM2EB1AL46 878 aaPredicted RBP15.85■□□□□ 0.13
SRP54-202ENST00000546080 PDE8AO60658 829 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 USO1O60763 962 aaKnown RBP15.85■□□□□ 0.13
SRP54-202ENST00000546080 HSF2BPO75031 334 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 TACC1O75410 805 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 CALM1P0DP23 149 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 CALM2P0DP24 149 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 CALM3P0DP25 149 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 CCDC96Q2M329 555 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 TTC19Q6DKK2 380 aaPredicted RBP15.85■□□□□ 0.13
SRP54-202ENST00000546080 RASSF8Q8NHQ8 419 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 HDAC7Q8WUI4 952 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 TUBGCP2Q9BSJ2 902 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 LRWD1Q9UFC0 647 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 TRMT112Q9UI30 125 aaKnown RBP15.85■□□□□ 0.13
SRP54-202ENST00000546080 A6NNZ2 444 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 MYH3P11055 1940 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 HNRNPH1P31943 449 aaKnown RBP15.85■□□□□ 0.13
SRP54-202ENST00000546080 ITIH3Q06033 890 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 TBC1D8BQ0IIM8 1120 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 SF3B2Q13435 895 aaKnown RBP15.85■□□□□ 0.13
SRP54-202ENST00000546080 KCNB1Q14721 858 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 TUBB8Q3ZCM7 444 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 FBXW10Q5XX13 1052 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 ARL6IP4Q66PJ3 421 aaKnown RBP15.85■□□□□ 0.13
SRP54-202ENST00000546080 TMTC3Q6ZXV5 915 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 ZNF572Q7Z3I7 529 aaPredicted RBP15.85■□□□□ 0.13
SRP54-202ENST00000546080 PROSER2Q86WR7 435 aaPredicted RBP15.85■□□□□ 0.13
SRP54-202ENST00000546080 SDR42E1Q8WUS8 393 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 DISC1Q9NRI5 854 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 DMGDHQ9UI17 866 aaKnown RBP15.85■□□□□ 0.13
SRP54-202ENST00000546080 ANAPC4Q9UJX5 808 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 SAMM50Q9Y512 469 aa15.85■□□□□ 0.13
SRP54-202ENST00000546080 CNTNAP5Q8WYK1 1306 aa15.84■□□□□ 0.13
SRP54-202ENST00000546080 EPB41P11171 864 aaKnown RBP15.84■□□□□ 0.13
SRP54-202ENST00000546080 KLK7P49862 253 aa15.84■□□□□ 0.13
SRP54-202ENST00000546080 MNAT1P51948 309 aa15.84■□□□□ 0.13
SRP54-202ENST00000546080 SKOR1P84550 965 aa15.84■□□□□ 0.13
SRP54-202ENST00000546080 NKX1-1Q15270 411 aaPredicted RBP15.84■□□□□ 0.13
SRP54-202ENST00000546080 ALS2CLQ60I27 953 aa15.84■□□□□ 0.13
SRP54-202ENST00000546080 EMBQ6PCB8 327 aa15.84■□□□□ 0.13
SRP54-202ENST00000546080 DNAJC10Q8IXB1 793 aa15.84■□□□□ 0.13
SRP54-202ENST00000546080 SPATA4Q8NEY3 305 aa15.84■□□□□ 0.13
SRP54-202ENST00000546080 CCDC42Q96M95 316 aa15.84■□□□□ 0.13
SRP54-202ENST00000546080 LRP2BPQ9P2M1 347 aa15.84■□□□□ 0.13
SRP54-202ENST00000546080 PLCH1Q4KWH8 1693 aa15.84■□□□□ 0.13
SRP54-202ENST00000546080 LOC102724159A0A0B4J2E5 919 aa15.83■□□□□ 0.13
SRP54-202ENST00000546080 SNAP23O00161 211 aa15.83■□□□□ 0.13
SRP54-202ENST00000546080 NDUFAB1O14561 156 aa15.83■□□□□ 0.13
SRP54-202ENST00000546080 MATR3P43243 847 aaKnown RBP eCLIP15.83■□□□□ 0.135e-10■■■■□ 24.4
SRP54-202ENST00000546080 PWP2Q15269 919 aaKnown RBP15.83■□□□□ 0.13
SRP54-202ENST00000546080 CCDC181Q5TID7 509 aa15.83■□□□□ 0.13
SRP54-202ENST00000546080 TTI2Q6NXR4 508 aa15.83■□□□□ 0.13
SRP54-202ENST00000546080 B4GALNT4Q76KP1 1039 aa15.83■□□□□ 0.13
SRP54-202ENST00000546080 IQCA1Q86XH1 822 aa15.83■□□□□ 0.13
SRP54-202ENST00000546080 CSGALNACT2Q8N6G5 542 aa15.83■□□□□ 0.13
SRP54-202ENST00000546080 SMCR8Q8TEV9 937 aaPredicted RBP15.83■□□□□ 0.13
SRP54-202ENST00000546080 RASSF10A6NK89 507 aa15.83■□□□□ 0.12
SRP54-202ENST00000546080 SLC7A5Q01650 507 aa15.83■□□□□ 0.12
SRP54-202ENST00000546080 TROAPQ12815 778 aa15.83■□□□□ 0.12
SRP54-202ENST00000546080 TTMPQ5BVD1 217 aa15.83■□□□□ 0.12
SRP54-202ENST00000546080 GPATCH11Q8N954 259 aa15.83■□□□□ 0.12
SRP54-202ENST00000546080 TSEN2Q8NCE0 465 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms