RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 ZNF214Q9UL59 606 aaPredicted RBP20.34■□□□□ 0.85
CD9-211ENST00000546073 HPS5Q9UPZ3 1129 aa20.34■□□□□ 0.85
CD9-211ENST00000546073 ZBTB43O43298 467 aa20.33■□□□□ 0.85
CD9-211ENST00000546073 PEX10O60683 326 aa20.33■□□□□ 0.85
CD9-211ENST00000546073 ICAM1P05362 532 aa20.33■□□□□ 0.85
CD9-211ENST00000546073 RPS6KB1P23443 525 aa20.33■□□□□ 0.85
CD9-211ENST00000546073 EXOSC10Q01780 885 aaKnown RBP20.33■□□□□ 0.85
CD9-211ENST00000546073 Q6ZUG5 572 aa20.33■□□□□ 0.85
CD9-211ENST00000546073 RUFY3Q7L099 469 aa20.33■□□□□ 0.85
CD9-211ENST00000546073 NKX2-3Q8TAU0 364 aa20.33■□□□□ 0.85
CD9-211ENST00000546073 PXYLP1Q8TE99 480 aa20.33■□□□□ 0.85
CD9-211ENST00000546073 RANBP17Q9H2T7 1088 aaKnown RBP20.33■□□□□ 0.85
CD9-211ENST00000546073 HOMER2Q9NSB8 354 aa20.33■□□□□ 0.85
CD9-211ENST00000546073 RBM28Q9NW13 759 aaKnown RBP20.33■□□□□ 0.85
CD9-211ENST00000546073 CCDC85CA6NKD9 419 aa20.32■□□□□ 0.84
CD9-211ENST00000546073 XRCC5P13010 732 aaKnown RBP20.32■□□□□ 0.84
CD9-211ENST00000546073 PPP2R5BQ15173 497 aa20.32■□□□□ 0.84
CD9-211ENST00000546073 MFSD14CQ5VZR4 134 aa20.32■□□□□ 0.84
CD9-211ENST00000546073 SGMS1Q86VZ5 419 aa20.32■□□□□ 0.84
CD9-211ENST00000546073 ADGRF4Q8IZF3 695 aa20.32■□□□□ 0.84
CD9-211ENST00000546073 ABHD8Q96I13 439 aa20.32■□□□□ 0.84
CD9-211ENST00000546073 TRERF1Q96PN7 1200 aa20.32■□□□□ 0.84
CD9-211ENST00000546073 APBA2Q99767 749 aa20.32■□□□□ 0.84
CD9-211ENST00000546073 GABRQQ9UN88 632 aa20.32■□□□□ 0.84
CD9-211ENST00000546073 KLF18A0A0U1RQI7 1052 aa20.31■□□□□ 0.84
CD9-211ENST00000546073 ADORA2AP29274 412 aa20.31■□□□□ 0.84
CD9-211ENST00000546073 CTGFP29279 349 aa20.31■□□□□ 0.84
CD9-211ENST00000546073 TROAPQ12815 778 aa20.31■□□□□ 0.84
CD9-211ENST00000546073 ANKRD1Q15327 319 aa20.31■□□□□ 0.84
CD9-211ENST00000546073 MICU3Q86XE3 530 aa20.31■□□□□ 0.84
CD9-211ENST00000546073 FBXO11Q86XK2 927 aa20.31■□□□□ 0.84
CD9-211ENST00000546073 REPS2Q8NFH8 660 aa20.31■□□□□ 0.84
CD9-211ENST00000546073 RRP36Q96EU6 259 aaKnown RBP20.31■□□□□ 0.84
CD9-211ENST00000546073 MPHOSPH6Q99547 160 aaKnown RBP20.31■□□□□ 0.84
CD9-211ENST00000546073 ZSWIM6Q9HCJ5 1215 aa20.31■□□□□ 0.84
CD9-211ENST00000546073 RNF146Q9NTX7 359 aa20.31■□□□□ 0.84
CD9-211ENST00000546073 PDRG1Q9NUG6 133 aa20.31■□□□□ 0.84
CD9-211ENST00000546073 PALM3A6NDB9 673 aaPredicted RBP20.3■□□□□ 0.84
CD9-211ENST00000546073 SNAP25P60880 206 aa20.3■□□□□ 0.84
CD9-211ENST00000546073 GRB14Q14449 540 aa20.3■□□□□ 0.84
CD9-211ENST00000546073 CDC37Q16543 378 aaPredicted RBP20.3■□□□□ 0.84
CD9-211ENST00000546073 MORN1Q5T089 497 aa20.3■□□□□ 0.84
CD9-211ENST00000546073 MCF2L2Q86YR7 1114 aa20.3■□□□□ 0.84
CD9-211ENST00000546073 FANCBQ8NB91 859 aa20.3■□□□□ 0.84
CD9-211ENST00000546073 BRF1Q92994 677 aa20.3■□□□□ 0.84
CD9-211ENST00000546073 AGBL1Q96MI9 1066 aa20.3■□□□□ 0.84
CD9-211ENST00000546073 TCEANC2Q96MN5 208 aa20.3■□□□□ 0.84
CD9-211ENST00000546073 AMNQ9BXJ7 453 aa20.3■□□□□ 0.84
CD9-211ENST00000546073 MAD2L2Q9UI95 211 aa20.3■□□□□ 0.84
CD9-211ENST00000546073 MRPL11Q9Y3B7 192 aaKnown RBP20.3■□□□□ 0.84
CD9-211ENST00000546073 PFASO15067 1338 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 GOLGA8AA7E2F4 631 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 GOLGA8BA8MQT2 603 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 B4DLN1 442 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 HMGCRP04035 888 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 SMARCA1P28370 1054 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 MRPL12P52815 198 aaKnown RBP20.29■□□□□ 0.84
CD9-211ENST00000546073 RCAN1P53805 252 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 RTN1Q16799 776 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 CPLX2Q6PUV4 134 aaKnown RBP20.29■□□□□ 0.84
CD9-211ENST00000546073 RASGRP2Q7LDG7 609 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 HOMER1Q86YM7 354 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 MYL10Q9BUA6 226 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 GJD2Q9UKL4 321 aa20.29■□□□□ 0.84
CD9-211ENST00000546073 ABCB11O95342 1321 aa20.28■□□□□ 0.84
CD9-211ENST00000546073 ZBTB5O15062 677 aa20.28■□□□□ 0.84
CD9-211ENST00000546073 METAP2P50579 478 aaKnown RBP eCLIP20.28■□□□□ 0.84
CD9-211ENST00000546073 AKAP17AQ02040 695 aaKnown RBP20.28■□□□□ 0.84
CD9-211ENST00000546073 USH1GQ495M9 461 aa20.28■□□□□ 0.84
CD9-211ENST00000546073 POTEEQ6S8J3 1075 aa20.28■□□□□ 0.84
CD9-211ENST00000546073 NSMFQ6X4W1 530 aa20.28■□□□□ 0.84
CD9-211ENST00000546073 CCDC144CPQ8IYA2 1237 aa20.28■□□□□ 0.84
CD9-211ENST00000546073 STAG2Q8N3U4 1231 aa20.28■□□□□ 0.84
CD9-211ENST00000546073 SENP2Q9HC62 589 aa20.28■□□□□ 0.84
CD9-211ENST00000546073 GPHNQ9NQX3 736 aaPredicted RBP20.28■□□□□ 0.84
CD9-211ENST00000546073 POTEB2H3BUK9 544 aa20.27■□□□□ 0.84
CD9-211ENST00000546073 C8orf34Q49A92 452 aa20.27■□□□□ 0.84
CD9-211ENST00000546073 APOA5Q6Q788 366 aa20.27■□□□□ 0.84
CD9-211ENST00000546073 SH3TC2Q8TF17 1288 aa20.27■□□□□ 0.84
CD9-211ENST00000546073 MAF1Q9H063 256 aa20.27■□□□□ 0.84
CD9-211ENST00000546073 JMJD4Q9H9V9 463 aa20.27■□□□□ 0.84
CD9-211ENST00000546073 DIS3Q9Y2L1 958 aaKnown RBP20.27■□□□□ 0.84
CD9-211ENST00000546073 RIPK3Q9Y572 518 aa20.27■□□□□ 0.84
CD9-211ENST00000546073 PNMA6FA0A0J9YX94 578 aa20.26■□□□□ 0.83
CD9-211ENST00000546073 PTPDC1A2A3K4 754 aa20.26■□□□□ 0.83
CD9-211ENST00000546073 HOXC6P09630 235 aa20.26■□□□□ 0.83
CD9-211ENST00000546073 CPA1P15085 419 aa20.26■□□□□ 0.83
CD9-211ENST00000546073 ELNP15502 786 aa20.26■□□□□ 0.83
CD9-211ENST00000546073 FBXL16Q8N461 479 aa20.26■□□□□ 0.83
CD9-211ENST00000546073 ARMC5Q96C12 935 aa20.26■□□□□ 0.83
CD9-211ENST00000546073 SPZ1Q9BXG8 430 aa20.26■□□□□ 0.83
CD9-211ENST00000546073 C22orf23Q9BZE7 217 aa20.26■□□□□ 0.83
CD9-211ENST00000546073 UPF3BQ9BZI7 483 aaKnown RBP20.26■□□□□ 0.83
CD9-211ENST00000546073 ADD3Q9UEY8 706 aaKnown RBP20.26■□□□□ 0.83
CD9-211ENST00000546073 CPLX1O14810 134 aa20.25■□□□□ 0.83
CD9-211ENST00000546073 MYCP01106 439 aaPredicted RBP20.25■□□□□ 0.83
CD9-211ENST00000546073 RXRAP19793 462 aa20.25■□□□□ 0.83
CD9-211ENST00000546073 APOBRQ0VD83 1088 aa20.25■□□□□ 0.83
CD9-211ENST00000546073 QRICH1Q2TAL8 776 aa20.25■□□□□ 0.83
CD9-211ENST00000546073 IL27Q8NEV9 243 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms