RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 EHBP1Q8NDI1 1231 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 NUDT12Q9BQG2 462 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 NAPBQ9H115 298 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 FANCLQ9NW38 375 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 RMND1Q9NWS8 449 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-225ENST00000545920 CDC23Q9UJX2 597 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 ANAPC4Q9UJX5 808 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 FBXO2Q9UK22 296 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-225ENST00000545920 MAN1B1Q9UKM7 699 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 RAB21Q9UL25 225 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 NFE2L3Q9Y4A8 694 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 LRP5O75197 1615 aa7.33□□□□□ -1.24
SNHG1-225ENST00000545920 COL22A1Q8NFW1 1626 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-225ENST00000545920 C4AP0C0L4 1744 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 C4BP0C0L5 1744 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 TCRBV5S4A2TA0A5A2 114 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 TRIM75PA6NK02 468 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 TULP2O00295 520 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 MAP2K7O14733 419 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 RPS6KA5O75582 802 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 ATP1A3P13637 1013 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 FGFR2P21802 821 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 MARCKSP29966 332 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-225ENST00000545920 MCAMP43121 646 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 PLA2G4AP47712 749 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 HAND2P61296 217 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 AKAP17AQ02040 695 aaKnown RBP7.32□□□□□ -1.24
SNHG1-225ENST00000545920 PNOCQ13519 176 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 NAA30Q147X3 362 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-225ENST00000545920 WTAPQ15007 396 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 LONRF3Q496Y0 759 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 OTUD7BQ6GQQ9 843 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 MFSD6Q6ZSS7 791 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 CHST3Q7LGC8 479 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 HDXQ7Z353 690 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 SH3RF1Q7Z6J0 888 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 TBC1D10CQ8IV04 446 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 ANKMY2Q8IV38 441 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 DIS3L2Q8IYB7 885 aaKnown RBP7.32□□□□□ -1.24
SNHG1-225ENST00000545920 STK11IPQ8N1F8 1099 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 CRACR2BQ8N4Y2 399 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-225ENST00000545920 KIFC2Q96AC6 838 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 CARD6Q9BX69 1037 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 VIPAS39Q9H9C1 493 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 WWC3Q9ULE0 1092 aa7.32□□□□□ -1.24
SNHG1-225ENST00000545920 ZNF532Q9HCE3 1301 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 CTAGE9A4FU28 777 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 A6NNZ2 444 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 PRPF3O43395 683 aaKnown RBP7.31□□□□□ -1.24
SNHG1-225ENST00000545920 DDAH1O94760 285 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 DKK1O94907 266 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 CLSTN1O94985 981 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 TBC1D8O95759 1140 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 AVPP01185 164 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 A1BGP04217 495 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 APPP05067 770 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 ITGA6P23229 1130 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 CDC27P30260 824 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 ADORA1P30542 326 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 PBX1P40424 430 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 RPIAP49247 311 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 CHMP4BP1P59074 171 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 SMC1AQ14683 1233 aaKnown RBP7.31□□□□□ -1.24
SNHG1-225ENST00000545920 SWI5Q1ZZU3 235 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 TUBB8Q3ZCM7 444 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 MAP9Q49MG5 647 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 CDKAL1Q5VV42 579 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 ARL6IP4Q66PJ3 421 aaKnown RBP7.31□□□□□ -1.24
SNHG1-225ENST00000545920 CYB5R4Q7L1T6 521 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 SH3BP5LQ7L8J4 393 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 NLRP10Q86W26 655 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 MICU3Q86XE3 530 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 IFNL3Q8IZI9 196 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 TTLL11Q8NHH1 800 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 CTCFLQ8NI51 663 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-225ENST00000545920 C1orf216Q8TAB5 229 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 GOLGA5Q8TBA6 731 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 ADAM32Q8TC27 787 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 NOC3LQ8WTT2 800 aaKnown RBP7.31□□□□□ -1.24
SNHG1-225ENST00000545920 ESR2Q92731 530 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 ZNF594Q96JF6 807 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-225ENST00000545920 SPSB2Q99619 263 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 SLC26A6Q9BXS9 759 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 PUS3Q9BZE2 481 aaKnown RBP7.31□□□□□ -1.24
SNHG1-225ENST00000545920 MAGEF1Q9HAY2 307 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 MED4Q9NPJ6 270 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 STRN4Q9NRL3 753 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 CNNM1Q9NRU3 951 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 INTS13Q9NVM9 706 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 TMOD3Q9NYL9 352 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 LIMA1Q9UHB6 759 aaKnown RBP7.31□□□□□ -1.24
SNHG1-225ENST00000545920 NWD2Q9ULI1 1742 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 PCDHB9Q9Y5E1 797 aa7.31□□□□□ -1.24
SNHG1-225ENST00000545920 DISP2A7MBM2 1401 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 A0A1W2PQC6 194 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 B4E1Z4 1266 aa7.3□□□□□ -1.24
SNHG1-225ENST00000545920 POLR2DO15514 142 aaKnown RBP7.3□□□□□ -1.24
SNHG1-225ENST00000545920 RANBP6O60518 1105 aaKnown RBP7.3□□□□□ -1.24
SNHG1-225ENST00000545920 DTNBO60941 627 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms