RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 SLC3A2P08195 630 aaKnown RBP16.5■□□□□ 0.23
SEMA4D-224ENST00000544513 EPHB4P54760 987 aa16.5■□□□□ 0.23
SEMA4D-224ENST00000544513 FAAP100Q0VG06 881 aa16.5■□□□□ 0.23
SEMA4D-224ENST00000544513 KCNA10Q16322 511 aa16.5■□□□□ 0.23
SEMA4D-224ENST00000544513 ANKRD35Q8N283 1001 aa16.5■□□□□ 0.23
SEMA4D-224ENST00000544513 NUP133Q8WUM0 1156 aa16.5■□□□□ 0.23
SEMA4D-224ENST00000544513 FSD1Q9BTV5 496 aa16.5■□□□□ 0.23
SEMA4D-224ENST00000544513 NAPBQ9H115 298 aa16.5■□□□□ 0.23
SEMA4D-224ENST00000544513 ABHD16BQ9H3Z7 469 aa16.5■□□□□ 0.23
SEMA4D-224ENST00000544513 CTDP1Q9Y5B0 961 aaPredicted RBP16.5■□□□□ 0.23
SEMA4D-224ENST00000544513 MCM3APO60318 1980 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 ZNF536O15090 1300 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 MYADML2A6NDP7 307 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 TMEM232C9JQI7 657 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 MX1P20591 662 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 CDK7P50613 346 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 STAT2P52630 851 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 NKX3-2P78367 333 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 CCDC144BQ3MJ40 725 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 ZNF697Q5TEC3 545 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 SEMA6BQ9H3T3 888 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 IL17RBQ9NRM6 502 aa16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 ZHX1Q9UKY1 873 aaPredicted RBP16.49■□□□□ 0.23
SEMA4D-224ENST00000544513 ELP1O95163 1332 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 DCDC2CA8MYV0 355 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 CTAGE5O15320 804 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 RAG1P15918 1043 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 NOVP48745 357 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 SLC4A3P48751 1232 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 GJA9P57773 515 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 PPP4R3BQ5MIZ7 849 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 ARMCX2Q7L311 632 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 FAM160B2Q86V87 743 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 CHURC1Q8WUH1 139 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 STAG1Q8WVM7 1258 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 FAM161BQ96MY7 647 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 CDX2Q99626 313 aaPredicted RBP16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 STARD7Q9NQZ5 370 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 TMEM39AQ9NV64 488 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 ANAPC4Q9UJX5 808 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 TBX21Q9UL17 535 aa16.48■□□□□ 0.23
SEMA4D-224ENST00000544513 FGRP09769 529 aa16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 MCCP23508 829 aa16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 IRX5P78411 483 aaPredicted RBP16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 CNTN2Q02246 1040 aa16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 CCDC144CPQ8IYA2 1237 aa16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 PCSK9Q8NBP7 692 aaKnown RBP16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 AGBL1Q96MI9 1066 aa16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 TTYH1Q9H313 450 aaPredicted RBP16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 ACAD9Q9H845 621 aa16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 A1CFQ9NQ94 594 aaKnown RBP16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 INCENPQ9NQS7 918 aa16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 HOMER2Q9NSB8 354 aa16.47■□□□□ 0.23
SEMA4D-224ENST00000544513 SOWAHBA6NEL2 793 aa16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 TIMP1P01033 207 aa16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 ASGR1P07306 291 aa16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 C6orf222P0C671 652 aaPredicted RBP16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 SLC1A4P43007 532 aa16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 FPGSQ05932 587 aa16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 ALX1Q15699 326 aa16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 TKFCQ3LXA3 575 aa16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 RCSD1Q6JBY9 416 aa16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 CCDC129Q6ZRS4 1044 aa16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 GLT1D1Q96MS3 346 aa16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 RNF146Q9NTX7 359 aa16.46■□□□□ 0.23
SEMA4D-224ENST00000544513 ORC4O43929 436 aa16.45■□□□□ 0.22
SEMA4D-224ENST00000544513 NMT2O60551 498 aa16.45■□□□□ 0.22
SEMA4D-224ENST00000544513 CTDSPL2Q05D32 466 aa16.45■□□□□ 0.22
SEMA4D-224ENST00000544513 VPS53Q5VIR6 699 aa16.45■□□□□ 0.22
SEMA4D-224ENST00000544513 TICAM2Q86XR7 235 aa16.45■□□□□ 0.22
SEMA4D-224ENST00000544513 RNPC3Q96LT9 517 aaKnown RBP16.45■□□□□ 0.22
SEMA4D-224ENST00000544513 SPC25Q9HBM1 224 aa16.45■□□□□ 0.22
SEMA4D-224ENST00000544513 STX8Q9UNK0 236 aa16.45■□□□□ 0.22
SEMA4D-224ENST00000544513 ASTN1O14525 1302 aa16.45■□□□□ 0.22
SEMA4D-224ENST00000544513 MROH7Q68CQ1 1323 aa16.45■□□□□ 0.22
SEMA4D-224ENST00000544513 TMEM265A0A087WTH1 108 aa16.44■□□□□ 0.22
SEMA4D-224ENST00000544513 GNASQ5JWF2 1037 aa16.44■□□□□ 0.22
SEMA4D-224ENST00000544513 KCTD1Q719H9 257 aa16.44■□□□□ 0.22
SEMA4D-224ENST00000544513 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.44■□□□□ 0.22
SEMA4D-224ENST00000544513 EVI5LQ96CN4 794 aa16.44■□□□□ 0.22
SEMA4D-224ENST00000544513 TRERF1Q96PN7 1200 aa16.44■□□□□ 0.22
SEMA4D-224ENST00000544513 PRR12Q9ULL5 1215 aa16.44■□□□□ 0.22
SEMA4D-224ENST00000544513 GNEQ9Y223 722 aaKnown RBP16.44■□□□□ 0.22
SEMA4D-224ENST00000544513 A0A0U1RQG5 324 aaPredicted RBP16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 ASB14A6NK59 587 aa16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 TSPY2A6NKD2 308 aa16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 ARVCFO00192 962 aa16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 RRP1P56182 461 aaKnown RBP16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 MFSD5Q6N075 450 aa16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 C16orf59Q7L2K0 433 aa16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 RASGRP2Q7LDG7 609 aa16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 SLC43A3Q8NBI5 491 aa16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 HELLSQ9NRZ9 838 aa16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 CYP39A1Q9NYL5 469 aa16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 CHD7Q9P2D1 2997 aa16.43■□□□□ 0.22
SEMA4D-224ENST00000544513 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 CD4P01730 458 aa16.42■□□□□ 0.22
SEMA4D-224ENST00000544513 ALAS1P13196 640 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms