RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 IL1R1P14778 569 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 KCNJ12Q14500 433 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 KRT31Q15323 416 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 ECM1Q16610 540 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 DGKHQ86XP1 1220 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 SLF1Q9BQI6 1058 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 SEC63Q9UGP8 760 aaKnown RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 TRPC5Q9UL62 973 aaPredicted RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 TNRC6CQ9HCJ0 1690 aaKnown RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 PALM3A6NDB9 673 aaPredicted RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 C21orf2O43822 256 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 IDEP14735 1019 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 PLCG1P19174 1290 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 ATP2B4P23634 1241 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 NONOQ15233 471 aaKnown RBP eCLIP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 NELFCDQ8IXH7 590 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 PCMTD1Q96MG8 357 aaPredicted RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 TDRD3Q9H7E2 651 aaKnown RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 MARCH6O60337 910 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 STAT3P40763 770 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 UBA7P41226 1012 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 MCM6Q14566 821 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 NT5DC1Q5TFE4 455 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 CCDC94Q9BW85 323 aaPredicted RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 JMJD4Q9H9V9 463 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 B4DLN1 442 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 E9PMD0 336 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 CRKP46108 304 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 SPATA1Q5VX52 437 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 APTXQ7Z2E3 356 aaKnown RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 CERKQ8TCT0 537 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 DACH1Q9UI36 760 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 RBAK-RBAKDNI3L0D1 243 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 STK4Q13043 487 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 NR1I3Q14994 352 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 TRIM65Q6PJ69 517 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ZNF579Q8NAF0 562 aaKnown RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 KIF18AQ8NI77 898 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 DISC1Q9NRI5 854 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ZHX1Q9UKY1 873 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 DDX60Q8IY21 1712 aaKnown RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 COL22A1Q8NFW1 1626 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 GPR75-ASB3A0A0A6YYF3 556 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 MEIS1O00470 390 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 RRP1BQ14684 758 aaKnown RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 SMCR8Q8TEV9 937 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ZBTB12Q9Y330 459 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 PAXBP1Q9Y5B6 917 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 GYPCP04921 128 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ASIC1P78348 528 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ENOX2Q16206 610 aaKnown RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 CHP1Q99653 195 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 PPP1R1BQ9UD71 204 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ADD3Q9UEY8 706 aaKnown RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 NRAPQ86VF7 1730 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 EDIL3O43854 480 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 NEMFO60524 1076 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 SLU7O95391 586 aaKnown RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 CASQ1P31415 396 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 SEPT2Q15019 361 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 SPATA20Q8TB22 786 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ANKRD7Q92527 254 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 FERMT2Q96AC1 680 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 C6orf50Q9HD87 102 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 LRWD1Q9UFC0 647 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 FZD1Q9UP38 647 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 PARP3Q9Y6F1 533 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 HOXA13P31271 388 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 TBX2Q13207 712 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 CRY2Q49AN0 593 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ANKRD40Q6AI12 368 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 MIGA2Q7L4E1 593 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 GSDMAQ96QA5 445 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ZMYND15Q9H091 742 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ZHX3Q9H4I2 956 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 MTMR4Q9NYA4 1195 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 BCS1LQ9Y276 419 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 AKR1B15C9JRZ8 316 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 M0R2N6 131 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 SRGNP10124 158 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ERVK-24P63145 666 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 PPP2R5BQ15173 497 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 TCP11X2Q5H9J9 407 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ZNF569Q5MCW4 686 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 TEX35Q5T0J7 233 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ZNF658Q5TYW1 1059 aaPredicted RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 PPFIBP1Q86W92 1011 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 DNAAF5Q86Y56 855 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 PLEKHA4Q9H4M7 779 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 AGPAT5Q9NUQ2 364 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 PKD2L1Q9P0L9 805 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 SPATA31A6Q5VVP1 1343 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 A0A1B0GTH6 734 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 CTIFO43310 598 aaKnown RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 GRB10Q13322 594 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 ARHGAP29Q52LW3 1261 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 MTERF4Q7Z6M4 381 aaKnown RBP4.24□□□□□ -1.73
BRCA2-206ENST00000544455 GUCA1BQ9UMX6 200 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 SFI1A8K8P3 1242 aa4.24□□□□□ -1.73
BRCA2-206ENST00000544455 EEF2P13639 858 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms