RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 CXXC1Q9P0U4 656 aaPredicted RBP18.57■□□□□ 0.56
CD4-212ENST00000544344 IGKV6D-41A0A0C4DH26 115 aa18.56■□□□□ 0.56
CD4-212ENST00000544344 SBK1Q52WX2 424 aa18.56■□□□□ 0.56
CD4-212ENST00000544344 GNASQ5JWF2 1037 aa18.56■□□□□ 0.56
CD4-212ENST00000544344 PSRC1Q6PGN9 363 aaPredicted RBP18.56■□□□□ 0.56
CD4-212ENST00000544344 CCDC174Q6PII3 467 aa18.56■□□□□ 0.56
CD4-212ENST00000544344 ARMCX2Q7L311 632 aa18.56■□□□□ 0.56
CD4-212ENST00000544344 RPAP2Q8IXW5 612 aaPredicted RBP18.56■□□□□ 0.56
CD4-212ENST00000544344 HERVK_113Q902F9 699 aa18.56■□□□□ 0.56
CD4-212ENST00000544344 DDRGK1Q96HY6 314 aa18.56■□□□□ 0.56
CD4-212ENST00000544344 RAVER2Q9HCJ3 691 aaKnown RBP18.56■□□□□ 0.56
CD4-212ENST00000544344 THEGQ9P2T0 379 aa18.56■□□□□ 0.56
CD4-212ENST00000544344 ARPP21Q9UBL0 812 aaPredicted RBP18.56■□□□□ 0.56
CD4-212ENST00000544344 ASTN1O14525 1302 aa18.55■□□□□ 0.56
CD4-212ENST00000544344 RAB11FIP3O75154 756 aa18.55■□□□□ 0.56
CD4-212ENST00000544344 CYP2C18P33260 490 aa18.55■□□□□ 0.56
CD4-212ENST00000544344 SLC4A3P48751 1232 aa18.55■□□□□ 0.56
CD4-212ENST00000544344 CCDC144CPQ8IYA2 1237 aa18.55■□□□□ 0.56
CD4-212ENST00000544344 SLC43A3Q8NBI5 491 aa18.55■□□□□ 0.56
CD4-212ENST00000544344 ADAMTS19Q8TE59 1207 aa18.55■□□□□ 0.56
CD4-212ENST00000544344 VTI1AQ96AJ9 217 aa18.55■□□□□ 0.56
CD4-212ENST00000544344 STRBPQ96SI9 672 aaKnown RBP18.55■□□□□ 0.56
CD4-212ENST00000544344 IL23AQ9NPF7 189 aa18.55■□□□□ 0.56
CD4-212ENST00000544344 YBX2Q9Y2T7 364 aaKnown RBP18.55■□□□□ 0.56
CD4-212ENST00000544344 UMODL1Q5DID0 1318 aa18.54■□□□□ 0.56
CD4-212ENST00000544344 GSG1L2A8MUP6 293 aa18.54■□□□□ 0.56
CD4-212ENST00000544344 ZBED4O75132 1171 aa18.54■□□□□ 0.56
CD4-212ENST00000544344 BEX3Q00994 111 aa18.54■□□□□ 0.56
CD4-212ENST00000544344 STK11IPQ8N1F8 1099 aa18.54■□□□□ 0.56
CD4-212ENST00000544344 ANKRD35Q8N283 1001 aa18.54■□□□□ 0.56
CD4-212ENST00000544344 SPC25Q9HBM1 224 aa18.54■□□□□ 0.56
CD4-212ENST00000544344 ZBTB40Q9NUA8 1239 aa18.54■□□□□ 0.56
CD4-212ENST00000544344 LRRC37A2A6NM11 1700 aa18.54■□□□□ 0.56
CD4-212ENST00000544344 GRIN2DO15399 1336 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.53■□□□□ 0.56
CD4-212ENST00000544344 CNTN2Q02246 1040 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 RAB30Q15771 203 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 CCDC85BQ15834 202 aaPredicted RBP18.53■□□□□ 0.56
CD4-212ENST00000544344 FAM133AQ8N9E0 248 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 CHST13Q8NET6 341 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 MKL1Q969V6 931 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 KIFC2Q96AC6 838 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 VWCEQ96DN2 955 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 NKX2-4Q9H2Z4 354 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 CLIP2Q9UDT6 1046 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 XIRP2A4UGR9 3374 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 TRANK1O15050 2925 aa18.53■□□□□ 0.56
CD4-212ENST00000544344 TLR3O15455 904 aaKnown RBP18.52■□□□□ 0.56
CD4-212ENST00000544344 HMMRO75330 724 aa18.52■□□□□ 0.56
CD4-212ENST00000544344 PTGS1P23219 599 aa18.52■□□□□ 0.56
CD4-212ENST00000544344 OAZ1P54368 228 aa18.52■□□□□ 0.56
CD4-212ENST00000544344 MRPS5P82675 430 aaKnown RBP18.52■□□□□ 0.56
CD4-212ENST00000544344 CXCL17Q6UXB2 119 aa18.52■□□□□ 0.56
CD4-212ENST00000544344 FBXO40Q9UH90 709 aa18.52■□□□□ 0.56
CD4-212ENST00000544344 MSRAQ9UJ68 235 aa18.52■□□□□ 0.56
CD4-212ENST00000544344 GNEQ9Y223 722 aaKnown RBP18.52■□□□□ 0.56
CD4-212ENST00000544344 FGBP02675 491 aa18.51■□□□□ 0.55
CD4-212ENST00000544344 GIMAP6Q6P9H5 292 aa18.51■□□□□ 0.55
CD4-212ENST00000544344 CEP95Q96GE4 821 aa18.51■□□□□ 0.55
CD4-212ENST00000544344 WNT8AQ9H1J5 351 aa18.51■□□□□ 0.55
CD4-212ENST00000544344 HIPK3Q9H422 1215 aa18.51■□□□□ 0.55
CD4-212ENST00000544344 MKNK2Q9HBH9 465 aa18.51■□□□□ 0.55
CD4-212ENST00000544344 EPB41L4AQ9HCS5 686 aaPredicted RBP18.51■□□□□ 0.55
CD4-212ENST00000544344 MTMR4Q9NYA4 1195 aa18.51■□□□□ 0.55
CD4-212ENST00000544344 FEM1BQ9UK73 627 aa18.51■□□□□ 0.55
CD4-212ENST00000544344 ZNF536O15090 1300 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 SOWAHBA6NEL2 793 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 MINDY4BA8MYZ0 360 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 IGFBP4P22692 258 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 TNFAIP2Q03169 654 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 ZSCAN25Q6NSZ9 544 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 OTOP2Q7RTS6 562 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 LRRC47Q8N1G4 583 aaKnown RBP18.5■□□□□ 0.55
CD4-212ENST00000544344 GMCL1P1Q8NEA9 526 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 OSBP2Q969R2 916 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 UHRF1Q96T88 793 aaPredicted RBP18.5■□□□□ 0.55
CD4-212ENST00000544344 NOC4LQ9BVI4 516 aaKnown RBP18.5■□□□□ 0.55
CD4-212ENST00000544344 SLC28A3Q9HAS3 691 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 HOMER2Q9NSB8 354 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 SYNPO2Q9UMS6 1093 aa18.5■□□□□ 0.55
CD4-212ENST00000544344 DDX49Q9Y6V7 483 aaKnown RBP18.5■□□□□ 0.55
CD4-212ENST00000544344 TCF20Q9UGU0 1960 aaKnown RBP18.5■□□□□ 0.55
CD4-212ENST00000544344 PRDM1O75626 825 aa18.49■□□□□ 0.55
CD4-212ENST00000544344 RABGGTBP53611 331 aa18.49■□□□□ 0.55
CD4-212ENST00000544344 HNRNPUQ00839 825 aaKnown RBP eCLIP18.49■□□□□ 0.55
CD4-212ENST00000544344 ITGA7Q13683 1181 aa18.49■□□□□ 0.55
CD4-212ENST00000544344 TRPV6Q9H1D0 765 aa18.49■□□□□ 0.55
CD4-212ENST00000544344 A1CFQ9NQ94 594 aaKnown RBP18.49■□□□□ 0.55
CD4-212ENST00000544344 CTDP1Q9Y5B0 961 aaPredicted RBP18.49■□□□□ 0.55
CD4-212ENST00000544344 LCTP09848 1927 aa18.49■□□□□ 0.55
CD4-212ENST00000544344 CABYRO75952 493 aa18.48■□□□□ 0.55
CD4-212ENST00000544344 MYOGP15173 224 aa18.48■□□□□ 0.55
CD4-212ENST00000544344 SMPD1P17405 629 aa18.48■□□□□ 0.55
CD4-212ENST00000544344 CCL23P55773 120 aa18.48■□□□□ 0.55
CD4-212ENST00000544344 FSCN1Q16658 493 aaKnown RBP18.48■□□□□ 0.55
CD4-212ENST00000544344 TMEM63BQ5T3F8 832 aa18.48■□□□□ 0.55
CD4-212ENST00000544344 TLK2Q86UE8 772 aa18.48■□□□□ 0.55
CD4-212ENST00000544344 NECAB3Q96P71 396 aaPredicted RBP18.48■□□□□ 0.55
CD4-212ENST00000544344 ACAD9Q9H845 621 aa18.48■□□□□ 0.55
CD4-212ENST00000544344 COG6Q9Y2V7 657 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms