RNA–Protein interactions for RNA: ENST00000544050.1

DYRK4-215, Transcript of dual specificity tyrosine phosphorylation regulated kinase 4, human

TSL 2

Gene DYRK4, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DYRK4-215	ENST00000544050	GJB2	P29033	226 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	CDC27	P30260	824 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	HMGCS2	P54868	508 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	NUCB2	P80303	420 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	RRP1B	Q14684	758 aa	Known RBP	12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	RAB3GAP1	Q15042	981 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	ASPRV1	Q53RT3	343 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	TMTC3	Q6ZXV5	915 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	CCDC84	Q86UT8	332 aa	Predicted RBP	12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	TRIM22	Q8IYM9	498 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	GMCL1P1	Q8NEA9	526 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	DEFB118	Q96PH6	123 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	MYL10	Q9BUA6	226 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	WDR18	Q9BV38	432 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	PAK6	Q9NQU5	681 aa	Predicted RBP	12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	TMOD4	Q9NZQ9	345 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050	CLIP2	Q9UDT6	1046 aa		12.21	□□□□□ -0.45
DYRK4-215	ENST00000544050		A0A1W2PPC1	479 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	C19orf81	C9J6K1	198 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	HMGCR	P04035	888 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	RXRA	P19793	462 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	SMARCA1	P28370	1054 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	ADD1	P35611	737 aa	Known RBP	12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	BACE1	P56817	501 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	IRX3	P78415	501 aa	Predicted RBP	12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	NTRK3	Q16288	839 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	GPATCH4	Q5T3I0	446 aa	Known RBP	12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	ANKLE1	Q8NAG6	615 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	FAM184A	Q8NB25	1140 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	DCAF4	Q8WV16	495 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	WASF1	Q92558	559 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	RNF26	Q9BY78	433 aa	Predicted RBP	12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	CRISPLD2	Q9H0B8	497 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	PLXNB2	O15031	1838 aa		12.2	□□□□□ -0.46
DYRK4-215	ENST00000544050	MYH4	Q9Y623	1939 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	RANBP2	P49792	3224 aa	Known RBP	12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	PALM3	A6NDB9	673 aa	Predicted RBP	12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	JAK2	O60674	1132 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	PARP1	P09874	1014 aa	Known RBP	12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	PDHB	P11177	359 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	HOXA7	P31268	230 aa	Predicted RBP	12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	JAG1	P78504	1218 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	ATP2B2	Q01814	1243 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	SSRP1	Q08945	709 aa	Known RBP	12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	NECAB2	Q7Z6G3	386 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	RAB11FIP4	Q86YS3	637 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	CLEC10A	Q8IUN9	316 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	SIAH1	Q8IUQ4	282 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	CCDC144CP	Q8IYA2	1237 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	LRRC47	Q8N1G4	583 aa	Known RBP	12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	GMCL1	Q96IK5	515 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	GOPC	Q9HD26	462 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	ORC3	Q9UBD5	711 aa	Predicted RBP	12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	MORF4L1	Q9UBU8	362 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	MAD2L2	Q9UI95	211 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	TMX2	Q9Y320	296 aa		12.19	□□□□□ -0.46
DYRK4-215	ENST00000544050	RPTOR	Q8N122	1335 aa		12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	DEXI	O95424	95 aa		12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	AKAP17A	Q02040	695 aa	Known RBP	12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	ZNF543	Q08ER8	600 aa		12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	FUT2	Q10981	343 aa		12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	FAM177A1	Q8N128	213 aa	Predicted RBP	12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	SPZ1	Q9BXG8	430 aa		12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	PRO3102	Q9H379	93 aa		12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	HMX1	Q9NP08	348 aa	Predicted RBP	12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	GJD2	Q9UKL4	321 aa		12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	CUL9	Q8IWT3	2517 aa		12.18	□□□□□ -0.46
DYRK4-215	ENST00000544050	CNTNAP5	Q8WYK1	1306 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	USP17L10	C9JJH3	530 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	PRPF3	O43395	683 aa	Known RBP	12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	STX6	O43752	255 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	SYT1	P21579	422 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	MTMR2	Q13614	643 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	LARP1B	Q659C4	914 aa	Known RBP	12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	SLFN13	Q68D06	897 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	TRMT44	Q8IYL2	757 aa	Known RBP	12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	GPRC5A	Q8NFJ5	357 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	SOCS4	Q8WXH5	440 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	LPAR1	Q92633	364 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	PAWR	Q96IZ0	340 aa	Known RBP	12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	NUDT12	Q9BQG2	462 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	KIAA1683	Q9H0B3	1180 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	VCPKMT	Q9H867	229 aa		12.17	□□□□□ -0.46
DYRK4-215	ENST00000544050	KLRF2	D3W0D1	207 aa		12.16	□□□□□ -0.46
DYRK4-215	ENST00000544050		F5H6K3	240 aa		12.16	□□□□□ -0.46
DYRK4-215	ENST00000544050	PLEKHA8P1	O95397	391 aa		12.16	□□□□□ -0.46
DYRK4-215	ENST00000544050	BRD1	O95696	1058 aa		12.16	□□□□□ -0.46
DYRK4-215	ENST00000544050	NDUFB10	O96000	172 aa		12.16	□□□□□ -0.46
DYRK4-215	ENST00000544050	XRCC5	P13010	732 aa	Known RBP	12.16	□□□□□ -0.46
DYRK4-215	ENST00000544050	FDPS	P14324	419 aa	Known RBP	12.16	□□□□□ -0.46
DYRK4-215	ENST00000544050	MAPK4	P31152	587 aa		12.16	□□□□□ -0.46
DYRK4-215	ENST00000544050	SLC1A4	P43007	532 aa		12.16	□□□□□ -0.46
DYRK4-215	ENST00000544050	USP14	P54578	494 aa		12.16	□□□□□ -0.46
DYRK4-215	ENST00000544050	KLRC3	Q07444	240 aa		12.16	□□□□□ -0.46
DYRK4-215	ENST00000544050	CCDC96	Q2M329	555 aa		12.16	□□□□□ -0.46

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