RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 CCDC144BQ3MJ40 725 aa10.68□□□□□ -0.7
CD4-211ENST00000543755 TIGD5Q53EQ6 642 aa10.68□□□□□ -0.7
CD4-211ENST00000543755 NAA16Q6N069 864 aaPredicted RBP10.68□□□□□ -0.7
CD4-211ENST00000543755 TBC1D9Q6ZT07 1266 aa10.68□□□□□ -0.7
CD4-211ENST00000543755 RIOX2Q8IUF8 465 aa10.68□□□□□ -0.7
CD4-211ENST00000543755 SPATA5Q8NB90 893 aa10.68□□□□□ -0.7
CD4-211ENST00000543755 RETREG2Q8NC44 543 aa10.68□□□□□ -0.7
CD4-211ENST00000543755 ATG4CQ96DT6 458 aa10.68□□□□□ -0.7
CD4-211ENST00000543755 AGBL1Q96MI9 1066 aa10.68□□□□□ -0.7
CD4-211ENST00000543755 ABHD16BQ9H3Z7 469 aa10.68□□□□□ -0.7
CD4-211ENST00000543755 PLXNA3P51805 1871 aa10.68□□□□□ -0.7
CD4-211ENST00000543755 MPHOSPH10O00566 681 aaKnown RBP10.67□□□□□ -0.7
CD4-211ENST00000543755 SNAI1O95863 264 aaPredicted RBP10.67□□□□□ -0.7
CD4-211ENST00000543755 STAT3P40763 770 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 NBL1P41271 181 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 RFX5P48382 616 aaPredicted RBP10.67□□□□□ -0.7
CD4-211ENST00000543755 TIMM10P62072 90 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 BEX3Q00994 111 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 TMEM132BQ14DG7 1078 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 CLUL1Q15846 466 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 MAMDC4Q6UXC1 1216 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 FRMD5Q7Z6J6 570 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 TTC6Q86TZ1 520 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 PABPC5Q96DU9 382 aaKnown RBP10.67□□□□□ -0.7
CD4-211ENST00000543755 AP5M1Q9H0R1 490 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 AKAP2Q9Y2D5 859 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 CFAP47Q6ZTR5 3102 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 SIPA1L1O43166 1804 aa10.67□□□□□ -0.7
CD4-211ENST00000543755 IL16Q14005 1332 aa10.66□□□□□ -0.7
CD4-211ENST00000543755 USP5P45974 858 aa10.66□□□□□ -0.7
CD4-211ENST00000543755 NUBP1P53384 320 aa10.66□□□□□ -0.7
CD4-211ENST00000543755 PPP4CP60510 307 aa10.66□□□□□ -0.7
CD4-211ENST00000543755 ERVK-21P61565 698 aa10.66□□□□□ -0.7
CD4-211ENST00000543755 ZXDAP98168 799 aa10.66□□□□□ -0.7
CD4-211ENST00000543755 VWCEQ96DN2 955 aa10.66□□□□□ -0.7
CD4-211ENST00000543755 SH2D4AQ9H788 454 aa10.66□□□□□ -0.7
CD4-211ENST00000543755 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.66□□□□□ -0.7
CD4-211ENST00000543755 CLDND1Q9NY35 253 aa10.66□□□□□ -0.7
CD4-211ENST00000543755 HMG20BQ9P0W2 317 aa10.66□□□□□ -0.7
CD4-211ENST00000543755 TNKSO95271 1327 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 FANCIQ9NVI1 1328 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 ZNFX1Q9P2E3 1918 aaKnown RBP10.65□□□□□ -0.7
CD4-211ENST00000543755 A0A1B0GUL7 405 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 NCK2O43639 380 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 CYP2C9P11712 490 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 FSCN1Q16658 493 aaKnown RBP10.65□□□□□ -0.7
CD4-211ENST00000543755 TMCO2Q7Z6W1 182 aaPredicted RBP10.65□□□□□ -0.7
CD4-211ENST00000543755 ZNF467Q7Z7K2 595 aaPredicted RBP10.65□□□□□ -0.7
CD4-211ENST00000543755 BANK1Q8NDB2 785 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 FBXO22Q8NEZ5 403 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 MRPL38Q96DV4 380 aaKnown RBP10.65□□□□□ -0.7
CD4-211ENST00000543755 XAGE2Q96GT9 111 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 NEUROD6Q96NK8 337 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 RAD9AQ99638 391 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 EHD4Q9H223 541 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 ALDH8A1Q9H2A2 487 aaPredicted RBP10.65□□□□□ -0.7
CD4-211ENST00000543755 DMDP11532 3685 aa10.65□□□□□ -0.7
CD4-211ENST00000543755 TECTAO75443 2155 aa10.65□□□□□ -0.71
CD4-211ENST00000543755 KMT2EQ8IZD2 1858 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 STXBP3O00186 592 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 GALR2O43603 387 aaPredicted RBP10.64□□□□□ -0.71
CD4-211ENST00000543755 TNFAIP2Q03169 654 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 EXOSC9Q06265 439 aaKnown RBP10.64□□□□□ -0.71
CD4-211ENST00000543755 PUM1Q14671 1186 aaKnown RBP eCLIP10.64□□□□□ -0.71
CD4-211ENST00000543755 SEPT2Q15019 361 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 SMAD2Q15796 467 aaKnown RBP10.64□□□□□ -0.71
CD4-211ENST00000543755 MCTP2Q6DN12 878 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 TLK2Q86UE8 772 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 CERS3Q8IU89 383 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 WWC1Q8IX03 1113 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 SPICE1Q8N0Z3 855 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 ARHGEF10LQ9HCE6 1279 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 NCOR2Q9Y618 2525 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 ATRXP46100 2492 aa10.64□□□□□ -0.71
CD4-211ENST00000543755 LINC01553A4QN01 128 aa10.63□□□□□ -0.71
CD4-211ENST00000543755 WDR46O15213 610 aaKnown RBP10.63□□□□□ -0.71
CD4-211ENST00000543755 ADCY6O43306 1168 aa10.63□□□□□ -0.71
CD4-211ENST00000543755 PSMC6P62333 389 aa10.63□□□□□ -0.71
CD4-211ENST00000543755 NKX3-2P78367 333 aa10.63□□□□□ -0.71
CD4-211ENST00000543755 MKRN4PQ13434 485 aaPredicted RBP10.63□□□□□ -0.71
CD4-211ENST00000543755 BFSP2Q13515 415 aa10.63□□□□□ -0.71
CD4-211ENST00000543755 PI16Q6UXB8 463 aa10.63□□□□□ -0.71
CD4-211ENST00000543755 KIAA2013Q8IYS2 634 aa10.63□□□□□ -0.71
CD4-211ENST00000543755 MAGEB6Q8N7X4 407 aa10.63□□□□□ -0.71
CD4-211ENST00000543755 TRMT13Q9NUP7 481 aaKnown RBP10.63□□□□□ -0.71
CD4-211ENST00000543755 GRIN2DO15399 1336 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 CDK5RAP2Q96SN8 1893 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 A0A1W2PRG0 241 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 PITPNM1O00562 1244 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 CTAGE5O15320 804 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 IQCF3P0C7M6 154 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 WDR5P61964 334 aaKnown RBP10.62□□□□□ -0.71
CD4-211ENST00000543755 SIGLEC14Q08ET2 396 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 TCEAL5Q5H9L2 206 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 FAM47CQ5HY64 1035 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 ARMCX2Q7L311 632 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 CHAMP1Q96JM3 812 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 USP44Q9H0E7 712 aa10.62□□□□□ -0.71
CD4-211ENST00000543755 NSUN3Q9H649 340 aaKnown RBP10.62□□□□□ -0.71
CD4-211ENST00000543755 NOD1Q9Y239 953 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms