RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 NECTIN1Q15223 517 aa12.92□□□□□ -0.34
DDB1-222ENST00000543627 USH1GQ495M9 461 aa12.92□□□□□ -0.34
DDB1-222ENST00000543627 ANO1Q5XXA6 986 aa12.92□□□□□ -0.34
DDB1-222ENST00000543627 U2AF1L4Q8WU68 220 aaKnown RBP12.92□□□□□ -0.34
DDB1-222ENST00000543627 LRRC2Q9BYS8 371 aa12.92□□□□□ -0.34
DDB1-222ENST00000543627 SENP2Q9HC62 589 aa12.92□□□□□ -0.34
DDB1-222ENST00000543627 RNF146Q9NTX7 359 aa12.92□□□□□ -0.34
DDB1-222ENST00000543627 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
DDB1-222ENST00000543627 PLA2G6O60733 806 aa12.91□□□□□ -0.34
DDB1-222ENST00000543627 SGPL1O95470 568 aa12.91□□□□□ -0.34
DDB1-222ENST00000543627 MCM5P33992 734 aa12.91□□□□□ -0.34
DDB1-222ENST00000543627 RGS19P49795 217 aa12.91□□□□□ -0.34
DDB1-222ENST00000543627 NT5C2P49902 561 aa12.91□□□□□ -0.34
DDB1-222ENST00000543627 GPATCH4Q5T3I0 446 aaKnown RBP12.91□□□□□ -0.34
DDB1-222ENST00000543627 NSMFQ6X4W1 530 aa12.91□□□□□ -0.34
DDB1-222ENST00000543627 RAB11FIP4Q86YS3 637 aa12.91□□□□□ -0.34
DDB1-222ENST00000543627 CHST13Q8NET6 341 aa12.91□□□□□ -0.34
DDB1-222ENST00000543627 PIBF1Q8WXW3 757 aa12.91□□□□□ -0.34
DDB1-222ENST00000543627 ACAD9Q9H845 621 aa12.91□□□□□ -0.34
DDB1-222ENST00000543627 GPHNQ9NQX3 736 aaPredicted RBP12.91□□□□□ -0.34
DDB1-222ENST00000543627 NAP1L2Q9ULW6 460 aaPredicted RBP12.91□□□□□ -0.34
DDB1-222ENST00000543627 PLXNB2O15031 1838 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 CCDC69A6NI79 296 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 GJA8P48165 433 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 OAZ1P54368 228 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 FGD1P98174 961 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 SEC23AQ15436 765 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 MUM1L1Q5H9M0 696 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 CATIPQ7Z7H3 387 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 MB21D2Q8IYB1 491 aaPredicted RBP12.9□□□□□ -0.34
DDB1-222ENST00000543627 ABRAQ8N0Z2 381 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 STAG2Q8N3U4 1231 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 ANKS1AQ92625 1134 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 MAML3Q96JK9 1138 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 MYL10Q9BUA6 226 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 FBXO40Q9UH90 709 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 PARP14Q460N5 1801 aa12.9□□□□□ -0.34
DDB1-222ENST00000543627 ZNF536O15090 1300 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 KIAA0100Q14667 2235 aaKnown RBP12.89□□□□□ -0.35
DDB1-222ENST00000543627 PTPDC1A2A3K4 754 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 POTEB2H3BUK9 544 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 ATP2A1O14983 1001 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 ICAM1P05362 532 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 HOXC6P09630 235 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 ANTXR2P58335 489 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 ZNF792Q3KQV3 632 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 ASPRV1Q53RT3 343 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 BTNL9Q6UXG8 535 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 HOMER1Q86YM7 354 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 CCDC144CPQ8IYA2 1237 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
DDB1-222ENST00000543627 RANBP17Q9H2T7 1088 aaKnown RBP12.89□□□□□ -0.35
DDB1-222ENST00000543627 A0A0G2JMZ2 1700 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 REC8O95072 547 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 SNHG28P0DPA3 235 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 RXRAP19793 462 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 CALML3P27482 149 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 CNTN2Q02246 1040 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 CDC37Q16543 378 aaPredicted RBP12.88□□□□□ -0.35
DDB1-222ENST00000543627 TKFCQ3LXA3 575 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 IGDCC4Q8TDY8 1250 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 DPF3Q92784 378 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 SHISA4Q96DD7 197 aa12.88□□□□□ -0.35
DDB1-222ENST00000543627 PAK6Q9NQU5 681 aaPredicted RBP12.88□□□□□ -0.35
DDB1-222ENST00000543627 BRCA2P51587 3418 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 FARP2O94887 1054 aaPredicted RBP12.87□□□□□ -0.35
DDB1-222ENST00000543627 CPA1P15085 419 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 BAATQ14032 418 aaPredicted RBP12.87□□□□□ -0.35
DDB1-222ENST00000543627 COL9A3Q14050 684 aaPredicted RBP12.87□□□□□ -0.35
DDB1-222ENST00000543627 ADCK5Q3MIX3 580 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 OLFML2BQ68BL8 750 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 SYNE3Q6ZMZ3 975 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 ZNF654Q8IZM8 581 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 TRPV1Q8NER1 839 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 CTCFLQ8NI51 663 aaPredicted RBP12.87□□□□□ -0.35
DDB1-222ENST00000543627 TMEM87BQ96K49 555 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
DDB1-222ENST00000543627 PURBQ96QR8 312 aaKnown RBP12.87□□□□□ -0.35
DDB1-222ENST00000543627 TINF2Q9BSI4 451 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 LY9Q9HBG7 655 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 A1CFQ9NQ94 594 aaKnown RBP12.87□□□□□ -0.35
DDB1-222ENST00000543627 MAD2L2Q9UI95 211 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 ZHX1Q9UKY1 873 aaPredicted RBP12.87□□□□□ -0.35
DDB1-222ENST00000543627 CNPY2Q9Y2B0 182 aa12.87□□□□□ -0.35
DDB1-222ENST00000543627 ZNFX1Q9P2E3 1918 aaKnown RBP12.87□□□□□ -0.35
DDB1-222ENST00000543627 NFIBO00712 420 aa12.86□□□□□ -0.35
DDB1-222ENST00000543627 SH2B2O14492 632 aaPredicted RBP12.86□□□□□ -0.35
DDB1-222ENST00000543627 KRT32Q14532 448 aa12.86□□□□□ -0.35
DDB1-222ENST00000543627 GRM4Q14833 912 aa12.86□□□□□ -0.35
DDB1-222ENST00000543627 QRICH1Q2TAL8 776 aa12.86□□□□□ -0.35
DDB1-222ENST00000543627 MAP3K21Q5TCX8 1036 aa12.86□□□□□ -0.35
DDB1-222ENST00000543627 NOL8Q76FK4 1167 aaKnown RBP12.86□□□□□ -0.35
DDB1-222ENST00000543627 EEPD1Q7L9B9 569 aa12.86□□□□□ -0.35
DDB1-222ENST00000543627 FBXO11Q86XK2 927 aa12.86□□□□□ -0.35
DDB1-222ENST00000543627 TMTC2Q8N394 836 aa12.86□□□□□ -0.35
DDB1-222ENST00000543627 CCDC82Q8N4S0 544 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms