RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 FDX1P10109 184 aa18.58■□□□□ 0.56
SCNN1A-220ENST00000543585 ZNF543Q08ER8 600 aa18.58■□□□□ 0.56
SCNN1A-220ENST00000543585 COL9A3Q14050 684 aaPredicted RBP18.58■□□□□ 0.56
SCNN1A-220ENST00000543585 CCDC174Q6PII3 467 aa18.58■□□□□ 0.56
SCNN1A-220ENST00000543585 IQCA1Q86XH1 822 aa18.58■□□□□ 0.56
SCNN1A-220ENST00000543585 FGD4Q96M96 766 aa18.58■□□□□ 0.56
SCNN1A-220ENST00000543585 RANBP17Q9H2T7 1088 aaKnown RBP18.58■□□□□ 0.56
SCNN1A-220ENST00000543585 CNNM2Q9H8M5 875 aa18.58■□□□□ 0.56
SCNN1A-220ENST00000543585 OGDHLQ9ULD0 1010 aa18.58■□□□□ 0.56
SCNN1A-220ENST00000543585 E7EWF7 191 aa18.57■□□□□ 0.56
SCNN1A-220ENST00000543585 GOLGA8HP0CJ92 632 aa18.57■□□□□ 0.56
SCNN1A-220ENST00000543585 KCTD2Q14681 263 aa18.57■□□□□ 0.56
SCNN1A-220ENST00000543585 PRAMEF19Q5SWL8 479 aa18.57■□□□□ 0.56
SCNN1A-220ENST00000543585 SYDE2Q5VT97 1194 aa18.57■□□□□ 0.56
SCNN1A-220ENST00000543585 PNMA1Q8ND90 353 aa18.57■□□□□ 0.56
SCNN1A-220ENST00000543585 CPVLQ9H3G5 476 aa18.57■□□□□ 0.56
SCNN1A-220ENST00000543585 HOMER2Q9NSB8 354 aa18.57■□□□□ 0.56
SCNN1A-220ENST00000543585 CTDP1Q9Y5B0 961 aaPredicted RBP18.57■□□□□ 0.56
SCNN1A-220ENST00000543585 SENP2Q9HC62 589 aa18.56■□□□□ 0.56
SCNN1A-220ENST00000543585 DIS3Q9Y2L1 958 aaKnown RBP18.56■□□□□ 0.56
SCNN1A-220ENST00000543585 NEFLP07196 543 aa18.55■□□□□ 0.56
SCNN1A-220ENST00000543585 ANTXR2P58335 489 aa18.55■□□□□ 0.56
SCNN1A-220ENST00000543585 CCDC178Q5BJE1 867 aa18.55■□□□□ 0.56
SCNN1A-220ENST00000543585 MUM1L1Q5H9M0 696 aa18.55■□□□□ 0.56
SCNN1A-220ENST00000543585 CHST3Q7LGC8 479 aa18.55■□□□□ 0.56
SCNN1A-220ENST00000543585 CHST13Q8NET6 341 aa18.55■□□□□ 0.56
SCNN1A-220ENST00000543585 PAWRQ96IZ0 340 aaKnown RBP18.55■□□□□ 0.56
SCNN1A-220ENST00000543585 RNF146Q9NTX7 359 aa18.55■□□□□ 0.56
SCNN1A-220ENST00000543585 SLC5A4Q9NY91 659 aa18.55■□□□□ 0.56
SCNN1A-220ENST00000543585 ALAS1P13196 640 aa18.54■□□□□ 0.56
SCNN1A-220ENST00000543585 MB21D2Q8IYB1 491 aaPredicted RBP18.54■□□□□ 0.56
SCNN1A-220ENST00000543585 TRERF1Q96PN7 1200 aa18.54■□□□□ 0.56
SCNN1A-220ENST00000543585 TINF2Q9BSI4 451 aa18.54■□□□□ 0.56
SCNN1A-220ENST00000543585 UBAC1Q9BSL1 405 aa18.54■□□□□ 0.56
SCNN1A-220ENST00000543585 UBA5Q9GZZ9 404 aa18.54■□□□□ 0.56
SCNN1A-220ENST00000543585 KAT14Q9H8E8 782 aa18.54■□□□□ 0.56
SCNN1A-220ENST00000543585 A1CFQ9NQ94 594 aaKnown RBP18.54■□□□□ 0.56
SCNN1A-220ENST00000543585 DDX20Q9UHI6 824 aaKnown RBP18.54■□□□□ 0.56
SCNN1A-220ENST00000543585 SLC27A2O14975 620 aa18.53■□□□□ 0.56
SCNN1A-220ENST00000543585 ICAM1P05362 532 aa18.53■□□□□ 0.56
SCNN1A-220ENST00000543585 CNTN2Q02246 1040 aa18.53■□□□□ 0.56
SCNN1A-220ENST00000543585 NECTIN1Q15223 517 aa18.53■□□□□ 0.56
SCNN1A-220ENST00000543585 ANO1Q5XXA6 986 aa18.53■□□□□ 0.56
SCNN1A-220ENST00000543585 ANKRD35Q8N283 1001 aa18.53■□□□□ 0.56
SCNN1A-220ENST00000543585 ANKLE1Q8NAG6 615 aa18.53■□□□□ 0.56
SCNN1A-220ENST00000543585 DDX11Q96FC9 970 aa18.53■□□□□ 0.56
SCNN1A-220ENST00000543585 ACAD9Q9H845 621 aa18.53■□□□□ 0.56
SCNN1A-220ENST00000543585 FBXO40Q9UH90 709 aa18.53■□□□□ 0.56
SCNN1A-220ENST00000543585 CCPG1Q9ULG6 757 aa18.53■□□□□ 0.56
SCNN1A-220ENST00000543585 ASTN1O14525 1302 aa18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 CAPN2P17655 700 aa18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 CNGA1P29973 690 aa18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 TRDNQ13061 729 aa18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 TKFCQ3LXA3 575 aa18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 GPATCH4Q5T3I0 446 aaKnown RBP18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 IFIT1BQ5T764 474 aaKnown RBP18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 PRPF38BQ5VTL8 546 aaKnown RBP18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 KIAA1211Q6ZU35 1233 aa18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 STAG2Q8N3U4 1231 aa18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 NCOA7Q8NI08 942 aa18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 ANO2Q9NQ90 1003 aa18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 KIAA1217Q5T5P2 1943 aa18.52■□□□□ 0.56
SCNN1A-220ENST00000543585 PFASO15067 1338 aa18.51■□□□□ 0.55
SCNN1A-220ENST00000543585 SEPT4O43236 478 aa18.51■□□□□ 0.55
SCNN1A-220ENST00000543585 CDC45O75419 566 aa18.51■□□□□ 0.55
SCNN1A-220ENST00000543585 SNAI1O95863 264 aaPredicted RBP18.51■□□□□ 0.55
SCNN1A-220ENST00000543585 ZNF865P0CJ78 1059 aaPredicted RBP18.51■□□□□ 0.55
SCNN1A-220ENST00000543585 SLC35G1Q2M3R5 365 aa18.51■□□□□ 0.55
SCNN1A-220ENST00000543585 CREB3L3Q68CJ9 461 aa18.51■□□□□ 0.55
SCNN1A-220ENST00000543585 MAMDC4Q6UXC1 1216 aa18.51■□□□□ 0.55
SCNN1A-220ENST00000543585 FAM133AQ8N9E0 248 aa18.51■□□□□ 0.55
SCNN1A-220ENST00000543585 GPHNQ9NQX3 736 aaPredicted RBP18.51■□□□□ 0.55
SCNN1A-220ENST00000543585 DDX49Q9Y6V7 483 aaKnown RBP18.51■□□□□ 0.55
SCNN1A-220ENST00000543585 SOWAHBA6NEL2 793 aa18.5■□□□□ 0.55
SCNN1A-220ENST00000543585 NFIBO00712 420 aa18.5■□□□□ 0.55
SCNN1A-220ENST00000543585 COL6A1P12109 1028 aa18.5■□□□□ 0.55
SCNN1A-220ENST00000543585 ZNF467Q7Z7K2 595 aaPredicted RBP18.5■□□□□ 0.55
SCNN1A-220ENST00000543585 IGDCC4Q8TDY8 1250 aa18.5■□□□□ 0.55
SCNN1A-220ENST00000543585 CLEC4DQ8WXI8 215 aa18.5■□□□□ 0.55
SCNN1A-220ENST00000543585 PURBQ96QR8 312 aaKnown RBP18.5■□□□□ 0.55
SCNN1A-220ENST00000543585 CYP39A1Q9NYL5 469 aa18.5■□□□□ 0.55
SCNN1A-220ENST00000543585 SYNGAP1Q96PV0 1343 aa18.49■□□□□ 0.55
SCNN1A-220ENST00000543585 IFIT3O14879 490 aaKnown RBP18.49■□□□□ 0.55
SCNN1A-220ENST00000543585 ASPRV1Q53RT3 343 aa18.49■□□□□ 0.55
SCNN1A-220ENST00000543585 NECAB2Q7Z6G3 386 aa18.49■□□□□ 0.55
SCNN1A-220ENST00000543585 RALYLQ86SE5 291 aaKnown RBP18.49■□□□□ 0.55
SCNN1A-220ENST00000543585 ADGRF4Q8IZF3 695 aa18.49■□□□□ 0.55
SCNN1A-220ENST00000543585 LENG1Q96BZ8 264 aaPredicted RBP18.49■□□□□ 0.55
SCNN1A-220ENST00000543585 KATNBL1Q9H079 304 aa18.49■□□□□ 0.55
SCNN1A-220ENST00000543585 PPP4R2Q9NY27 417 aa18.49■□□□□ 0.55
SCNN1A-220ENST00000543585 MAD2L2Q9UI95 211 aa18.49■□□□□ 0.55
SCNN1A-220ENST00000543585 WDR19Q8NEZ3 1342 aa18.49■□□□□ 0.55
SCNN1A-220ENST00000543585 POTEB2H3BUK9 544 aa18.48■□□□□ 0.55
SCNN1A-220ENST00000543585 MSCO60682 206 aa18.48■□□□□ 0.55
SCNN1A-220ENST00000543585 PARP1P09874 1014 aaKnown RBP18.48■□□□□ 0.55
SCNN1A-220ENST00000543585 CDC37Q16543 378 aaPredicted RBP18.48■□□□□ 0.55
SCNN1A-220ENST00000543585 MSL3Q8N5Y2 521 aaKnown RBP18.48■□□□□ 0.55
SCNN1A-220ENST00000543585 C11orf49Q9H6J7 331 aa18.48■□□□□ 0.55
SCNN1A-220ENST00000543585 JMJD4Q9H9V9 463 aa18.48■□□□□ 0.55
SCNN1A-220ENST00000543585 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms